Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,290,696 A→G N628S (AAC→AGC)  yraJ → putative fimbrial usher protein YraJ

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,290,6960AG100.0% 328.6 / NA 87N628S (AAC→AGC) yraJputative fimbrial usher protein YraJ
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (39/48);  total (39/48)

TATCAGATGACCAGCCAGAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGC  >  NC_000913/3290560‑3290832
                                                                                                                                        |                                                                                                                                        
tATCAGATGACCAGCCAGAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAgcgc                                                                                                                                       >  1:873565/1‑140 (MQ=255)
  tCAGATGACCAGCCAGAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCa                                                                                                                                     >  2:985076/1‑140 (MQ=255)
   cAGATGACCAGCCAGAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAg                                                                                                                                    <  1:824781/140‑1 (MQ=255)
    aGATGACCAGCCAGAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGt                                                                                                                                   <  1:553311/140‑1 (MQ=255)
     gATGACCAGCCAGAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGtt                                                                                                                                  >  2:25420/1‑140 (MQ=255)
      aTGACCAGCCAGAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTa                                                                                                                                 <  2:1033080/140‑1 (MQ=255)
         aCCAGCCAGAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCg                                                                                                                              >  1:595789/1‑140 (MQ=255)
           cagccagAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGtt                                                                                                                            <  2:595789/140‑1 (MQ=255)
           cagccagAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGtt                                                                                                                            <  1:490046/140‑1 (MQ=255)
           cagccagAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGtt                                                                                                                            <  2:407453/140‑1 (MQ=255)
            agccagAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTc                                                                                                                           >  1:909762/1‑140 (MQ=255)
            agccagAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTc                                                                                                                           >  1:311985/1‑140 (MQ=255)
             gccagAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGtt                                                                                                                            >  2:72786/1‑138 (MQ=255)
             gccagAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGtt                                                                                                                            <  1:72786/138‑1 (MQ=255)
             gccagAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCa                                                                                                                          >  1:971341/1‑140 (MQ=255)
             gccagAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCa                                                                                                                          >  1:576105/1‑140 (MQ=255)
              ccagAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCAc                                                                                                                         >  1:433273/1‑140 (MQ=255)
               cagAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCAcc                                                                                                                        <  2:971341/140‑1 (MQ=255)
                  aaaGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTa                                                                                                                     >  1:211481/1‑140 (MQ=255)
                   aaGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTAt                                                                                                                    >  2:506253/1‑140 (MQ=255)
                    aGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATg                                                                                                                   <  2:748108/140‑1 (MQ=255)
                      aTCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGc                                                                                                                 <  1:1379100/140‑1 (MQ=255)
                      aTCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGc                                                                                                                 <  2:819328/140‑1 (MQ=255)
                       tCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTAt                                                                                                                    <  2:1319953/136‑1 (MQ=255)
                       tCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTAt                                                                                                                    >  1:1319953/1‑136 (MQ=255)
                        cGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGTAc                                                                                                               >  2:1251826/1‑140 (MQ=255)
                        cGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCAc                                                                                                               >  1:1021658/1‑140 (MQ=255)
                           ccaacccaacATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCtt                                                                                                            <  2:987601/140‑1 (MQ=255)
                             aaccaaacATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCa                                                                                                          <  1:320721/140‑1 (MQ=255)
                                ccaacATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTg                                                                                                       <  2:576105/140‑1 (MQ=255)
                                ccaacATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTg                                                                                                       <  1:82213/140‑1 (MQ=255)
                                 caacATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGc                                                                                                      <  2:1021658/140‑1 (MQ=255)
                                      tGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGAt                                                                                                 <  2:909762/140‑1 (MQ=255)
                                      tGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGAt                                                                                                 <  2:1047992/140‑1 (MQ=255)
                                         aaTGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACa                                                                                              >  1:49645/1‑140 (MQ=255)
                                         aaTGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACa                                                                                              >  1:736526/1‑140 (MQ=255)
                                         aaTGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACa                                                                                              >  2:431700/1‑140 (MQ=255)
                                         aaTGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACa                                                                                              >  1:256862/1‑140 (MQ=255)
                                          aTGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAg                                                                                             <  1:117936/140‑1 (MQ=255)
                                            gCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGTACCTTCAGTGCCGGATACAGCt                                                                                           <  1:1251826/140‑1 (MQ=255)
                                            gCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCt                                                                                           <  2:211481/140‑1 (MQ=255)
                                            gCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCt                                                                                           >  2:388352/1‑140 (MQ=255)
                                            gCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCt                                                                                           <  1:985076/140‑1 (MQ=255)
                                              gTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTAc                                                                                         <  1:510618/140‑1 (MQ=255)
                                                        cTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGAca                                                                               <  2:662122/140‑1 (MQ=255)
                                                           aCTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGAcagca                                                                            <  1:388352/140‑1 (MQ=255)
                                                                 ggATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAAt                                                                      >  1:200325/1‑140 (MQ=255)
                                                                  gatgatGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATa                                                                     >  1:1081530/1‑140 (MQ=255)
                                                                       tgGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAAtt                                                                <  1:431700/140‑1 (MQ=255)
                                                                       tgGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAAtt                                                                >  1:452802/1‑140 (MQ=255)
                                                                       tgGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAAtt                                                                <  2:1408226/140‑1 (MQ=255)
                                                                       tgGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAAtt                                                                <  2:433273/140‑1 (MQ=255)
                                                                         gTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTAc                                                              >  2:1057946/1‑140 (MQ=255)
                                                                            gCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGc                                                           >  1:12462/1‑140 (MQ=255)
                                                                            gCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGc                                                           >  2:1099249/1‑140 (MQ=255)
                                                                                 aGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTAc                                                      >  1:1324386/1‑140 (MQ=255)
                                                                                      taGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACcggcg                                                 <  1:101098/140‑1 (MQ=255)
                                                                                       aGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACcggcgg                                                <  1:612780/140‑1 (MQ=255)
                                                                                       aGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACcggcgg                                                <  1:506253/140‑1 (MQ=255)
                                                                                       aGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACcggcgg                                                <  2:1163529/140‑1 (MQ=255)
                                                                                       aGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACcggcgg                                                <  2:134083/140‑1 (MQ=255)
                                                                                        gCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCggcggc                                               >  2:644904/1‑140 (MQ=255)
                                                                                        gCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCggcggc                                               <  2:536893/140‑1 (MQ=255)
                                                                                           tGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTg                                            <  2:17289/140‑1 (MQ=255)
                                                                                           tGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCCGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTg                                            <  2:1307551/140‑1 (MQ=255)
                                                                                             gAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGt                                          >  1:270677/1‑140 (MQ=255)
                                                                                             gAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGt                                          >  1:719560/1‑140 (MQ=255)
                                                                                                  aaGTCTGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTatcc                                     <  1:1057946/140‑1 (MQ=255)
                                                                                                       tGGATGACGATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCt                                >  2:898786/1‑140 (MQ=255)
                                                                                                               gATAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGt                        >  2:256574/1‑140 (MQ=255)
                                                                                                                aTAACAACCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTg                       <  2:270677/140‑1 (MQ=255)
                                                                                                                     aacCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGTGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGct                  <  2:452802/140‑1 (MQ=255)
                                                                                                                     aacCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGct                  <  2:49645/140‑1 (MQ=255)
                                                                                                                     aacCATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGct                  <  2:1081530/140‑1 (MQ=255)
                                                                                                                       ccATAACAGTCGCCCGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGAGGCGTGGTTATCCATCCTCATGGCGTGACGctct                <  2:873565/140‑1 (MQ=255)
                                                                                                                       ccATAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGctct                <  2:719560/140‑1 (MQ=255)
                                                                                                                         aTAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCATCATGGCGTGACGCTCTCg              <  1:240200/140‑1 (MQ=255)
                                                                                                                          tAACAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGCTCTCGc             <  2:736526/140‑1 (MQ=255)
                                                                                                                           aaCAGTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGCTCTCGCa            >  2:269789/1‑140 (MQ=255)
                                                                                                                               gTAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGCTCTCGCAatat        >  2:161670/1‑140 (MQ=255)
                                                                                                                                tAGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGCTCTCGCAATATc       >  1:330097/1‑140 (MQ=255)
                                                                                                                                 aGCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGCTCTCGCAATATCt      >  2:643911/1‑140 (MQ=255)
                                                                                                                                  gCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGCTCTCGCAATATCTg     >  2:962842/1‑140 (MQ=255)
                                                                                                                                  gCCTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGCTCTCGCAATATCTg     >  1:896427/1‑140 (MQ=255)
                                                                                                                                    cTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGCTCTCGCAATATCTggg   <  1:644904/140‑1 (MQ=255)
                                                                                                                                    cTGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGCTCTCGCAATATCTggg   <  1:962842/140‑1 (MQ=255)
                                                                                                                                     tGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGc  >  1:645996/1‑140 (MQ=255)
                                                                                                                                     tGAGCGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGc  >  2:562611/1‑140 (MQ=255)
                                                                                                                                        |                                                                                                                                        
TATCAGATGACCAGCCAGAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGC  >  NC_000913/3290560‑3290832

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑