BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,346,067	A→G	I451V (ATC→GTC)	rpoN →	RNA polymerase, sigma 54 (sigma N) factor

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,346,067	0	A	G	100.0%	376.7 / NA	102	I451V (ATC→GTC)	rpoN	RNA polymerase, sigma 54 (sigma N) factor
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (52/50); total (52/50)

Only 100 of 102 total aligned reads displayed.

GTCACGTCAATACCGAGGGCGGCGGCGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTATCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGAAGACACTATGCAGCTCAACATTACCGGAAATAACGTCG  >  NC_000913/3345930‑3346203

gTCACGTCAATACCGAGGGCGGCGGCGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTc                                                                                                                                        >  2:110039/1‑140 (MQ=255)

      tCAATACCGAGGGCGGCGGCGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCAtggtg                                                                                                                                  >  2:668474/1‑140 (MQ=255)

         aTACCGAGGGCGGCGGCGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCa                                                                                                                               <  1:766559/140‑1 (MQ=255)

           aCCGAGGGCGGCGGCGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCAcg                                                                                                                             <  2:546906/140‑1 (MQ=255)

             cGAGGGCGGCGGCGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCAtggtg                                                                                                                                  >  2:395841/1‑133 (MQ=255)

             cGAGGGCGGCGGCGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCAtggtg                                                                                                                                  <  1:395841/133‑1 (MQ=255)

             cGAGGGCGGCGGCGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCAcgcc                                                                                                                           >  2:114930/1‑140 (MQ=255)

             cGAGGGCGGCGGCGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCAcgcc                                                                                                                           >  1:838828/1‑140 (MQ=255)

             cGAGGGCGGCGGCGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCAcgcc                                                                                                                           >  1:703951/1‑140 (MQ=255)

             cGAGGGCGGCGGCGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCAcgcc                                                                                                                           >  1:237390/1‑140 (MQ=255)

              gAGGGCGGCGGCGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCAcgccg                                                                                                                          <  1:861287/140‑1 (MQ=255)

               aGGGCGGCGGCGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCAcgccgc                                                                                                                         >  2:1215092/1‑140 (MQ=255)

               aGGGCGGCGGCGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCAcgccgc                                                                                                                         >  1:948661/1‑140 (MQ=255)

               aGGGCGGCGGCGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCAcgccgc                                                                                                                         >  1:894761/1‑140 (MQ=255)

               aGGGCGGCGGCGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCAcgccgc                                                                                                                         >  1:868792/1‑140 (MQ=255)

               aGGGCGGCGGCGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCAcgccgc                                                                                                                         >  1:710061/1‑140 (MQ=255)

               aGGGCGGCGGCGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCAcgccgc                                                                                                                         >  1:1365314/1‑140 (MQ=255)

                gggCGGCGGCGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCa                                                                                                                        <  2:838828/140‑1 (MQ=255)

                gggCGGCGGCGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCa                                                                                                                        <  2:948661/140‑1 (MQ=255)

                gggCGGCGGCGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCa                                                                                                                        <  2:868792/140‑1 (MQ=255)

                gggCGGCGGCGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTAAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCa                                                                                                                        >  2:904950/1‑140 (MQ=255)

                 ggcggcggcGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCAc                                                                                                                       >  1:1082190/1‑140 (MQ=255)

                 ggcggcggcGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCAc                                                                                                                       >  2:145439/1‑140 (MQ=255)

                 ggcggcggcGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCAc                                                                                                                       >  1:1105605/1‑140 (MQ=255)

                 ggcggcggcGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAAACCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCAc                                                                                                                       >  1:1242170/1‑140 (MQ=255)

                 ggcggcggcGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCAGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCacac                                                                                                                       <  2:417720/140‑1 (MQ=255)

                   cggcggcgAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTg                                                                                                                     <  2:237390/140‑1 (MQ=255)

                      cggcgAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTg                                                                                                                  >  1:1153463/1‑140 (MQ=255)

                      cggcgAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTg                                                                                                                  >  1:421625/1‑140 (MQ=255)

                            aGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGt                                                                                                            <  1:836695/140‑1 (MQ=255)

                                 cctccACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCga                                                                                                       <  2:894761/140‑1 (MQ=255)

                                 cctccACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGAGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCga                                                                                                       <  2:1324442/140‑1 (MQ=255)

                                  ctccACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCgag                                                                                                      <  2:1365314/140‑1 (MQ=255)

                                    ccACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGagag                                                                                                    <  1:110039/140‑1 (MQ=255)

                                       cGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCt                                                                                                 <  1:668474/140‑1 (MQ=255)

                                       cGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCt                                                                                                 >  1:1158637/1‑140 (MQ=255)

                                             ttCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATcc                                                                                           >  1:1266917/1‑140 (MQ=255)

                                                 tGCGCTGGTGAAGAAATTAATCGCGGCGGAAATCCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTc                                                                                                  <  1:640777/129‑1 (MQ=255)

                                                 tGCGCTGGTGAAGAAATTAATCGCGGCGGAAATCCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTc                                                                                                  >  2:640777/1‑129 (MQ=255)

                                                 tGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTc                                                                                       >  1:750042/1‑140 (MQ=255)

                                                   cgcTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTccg                                                                                     >  2:530838/1‑140 (MQ=255)

                                                       ggTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGt                                                                                 <  2:825232/140‑1 (MQ=255)

                                                        gTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTcc                                                                                      >  1:986791/1‑134 (MQ=255)

                                                        gTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTc                                                                                >  2:172912/1‑140 (MQ=255)

                                                         tGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCa                                                                               >  2:354396/1‑140 (MQ=255)

                                                           aagaaATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCaaa                                                                             <  2:43255/140‑1 (MQ=255)

                                                            agaaATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAAc                                                                            <  2:703951/140‑1 (MQ=255)

                                                                aTTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGc                                                                        >  2:169211/1‑140 (MQ=255)

                                                                aTTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGc                                                                        <  2:1110420/140‑1 (MQ=255)

                                                                aTTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGc                                                                        >  2:836514/1‑140 (MQ=255)

                                                                  tAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGt                                                                      >  2:247484/1‑140 (MQ=255)

                                                                  tAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGt                                                                      >  1:953904/1‑140 (MQ=255)

                                                                   aaTCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTa                                                                     >  1:1421065/1‑140 (MQ=255)

                                                                       gcggcgGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAaaca                                                                 <  2:1105605/140‑1 (MQ=255)

                                                                       gcggcgGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAaaca                                                                 <  1:169211/140‑1 (MQ=255)

                                                                        cggcggAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAaacaa                                                                >  1:1199208/1‑140 (MQ=255)

                                                                        cggcggAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAaacaa                                                                <  2:710061/140‑1 (MQ=255)

                                                                          gcggAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACt                                                              >  1:1361343/1‑140 (MQ=255)

                                                                              aaaaCCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGtt                                                          <  2:421625/140‑1 (MQ=255)

                                                                              aaaaCCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGtt                                                          <  2:1153463/140‑1 (MQ=255)

                                                                                     aGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAaacaa                                                                >  2:803491/1‑127 (MQ=255)

                                                                                     aGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAaacaa                                                                <  1:803491/127‑1 (MQ=255)

                                                                                     aGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCa                                                   <  1:114930/140‑1 (MQ=255)

                                                                                     aGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCa                                                   <  2:1421065/140‑1 (MQ=255)

                                                                                      gCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCaa                                                  <  2:1199208/140‑1 (MQ=255)

                                                                                        gAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAAcc                                                >  2:1297028/1‑140 (MQ=255)

                                                                                          aaCCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGa                                              >  2:368189/1‑140 (MQ=255)

                                                                                           aCCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGAt                                             <  2:750042/140‑1 (MQ=255)

                                                                                           aCCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGAt                                             <  1:1215092/140‑1 (MQ=255)

                                                                                            ccGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATa                                            >  1:165579/1‑140 (MQ=255)

                                                                                             cGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATaa                                           >  1:871677/1‑140 (MQ=255)

                                                                                                tGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGa                                        <  2:1361343/140‑1 (MQ=255)

                                                                                                tGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGa                                        <  1:354396/140‑1 (MQ=255)

                                                                                                 gAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGaa                                       >  2:1380388/1‑140 (MQ=255)

                                                                                                        aGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGAAGACACTa                                <  1:904950/140‑1 (MQ=255)

                                                                                                        aGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGAAGACACTa                                >  1:527528/1‑140 (MQ=255)

                                                                                                         gCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGAAGACACTAt                               >  1:121959/1‑140 (MQ=255)

                                                                                                         gCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGAAGACACTAt                               >  2:428685/1‑140 (MQ=255)

                                                                                                         gCAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGAAGACACTAt                               >  2:1152420/1‑140 (MQ=255)

                                                                                                          cacgTTAACCTCTTCGCTGTCGGAACAAGGAGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGAAGACACTATg                              <  2:871677/137‑1 (MQ=255)

                                                                                                          cAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAACCAACTCGTTTGACCCAACCGATAAGGAAGACACTATg                              <  2:953904/140‑1 (MQ=255)

                                                                                                          cAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCg                                               <  2:2791/123‑1 (MQ=255)

                                                                                                          cAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCg                                               >  1:2791/1‑123 (MQ=255)

                                                                                                          cAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGAAGACACTATg                              <  2:1096159/140‑1 (MQ=255)

                                                                                                          cAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGAAGACACTATg                              <  2:1266917/140‑1 (MQ=255)

                                                                                                          cAAGTTAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGAAGACACTATg                              <  2:121959/140‑1 (MQ=255)

                                                                                                              ttAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGAAGACACTATGCAGc                          <  1:530838/140‑1 (MQ=255)

                                                                                                               tAACCTCTTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGAAGACACTATGCAGCt                         <  1:368189/140‑1 (MQ=255)

                                                                                                                    tctTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGAAGACACTATGCAGCTCaaga                    >  2:1313720/1‑138 (MQ=255)

                                                                                                                    tctTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGAAGACACTATGCAGCTCAACa                    <  1:1342319/140‑1 (MQ=255)

                                                                                                                    tctTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGAAGACACTATGCAGCTCAACa                    <  2:1242170/140‑1 (MQ=255)

                                                                                                                     ctTTGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGAAGACACTATGCAGCTCAACAt                   >  1:173929/1‑140 (MQ=255)

                                                                                                                      tttGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGAAGACACTATGCAGCTCAACAtt                  >  2:773923/1‑140 (MQ=255)

                                                                                                                        tGCTGTCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGAAGACACTATGCAGCTCAACATTAc                >  2:1154892/1‑140 (MQ=255)

                                                                                                                             tCGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGAAGACACTATGCAGCTCAACATTACCGGaa           >  1:55179/1‑140 (MQ=255)

                                                                                                                              cGGAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGAAGACACTATGCAGCTCAACATTACCGGaaa          <  1:773923/140‑1 (MQ=255)

                                                                                                                               ggAACAAGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGAAGACACTATGCAGCTCAACATTACCGGAAAt         >  2:1038445/1‑140 (MQ=255)

                                                                                                                                     aGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGAAGACACTATGCAGCTCAACATTACCGGAAATAACGTc   <  1:428685/140‑1 (MQ=255)

                                                                                                                                     aGGTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGAAGACACTATGCAGCTCAACATTACCGGAAATAACGTc   <  2:384471/140‑1 (MQ=255)

                                                                                                                                      ggTGTCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGAAGACACTATGCAGCTCAACATTACCGGAAATAACGTCg  <  1:1038445/140‑1 (MQ=255)

GTCACGTCAATACCGAGGGCGGCGGCGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTATCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGACCCAACCGATAAGGAAGACACTATGCAGCTCAACATTACCGGAAATAACGTCG  >  NC_000913/3345930‑3346203

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`