| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,483,868 | A→G | T270A (ACC→GCC) | hrpA → | ATP‑dependent RNA helicase HrpA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,483,868 | 0 | A | G | 100.0% | 30.7 / NA | 10 | T270A (ACC→GCC) | hrpA | ATP‑dependent RNA helicase HrpA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (5/5); total (5/5) | |||||||||||
ATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCTATCCGGTGGAAGTGCGCTATCGCCCGATTGTTGAAGAAGCCGATGACACCGAGCGCGATCAGTTGCAGGCGATTTTTGACGCCGTAGACGAACTGAGTCAGGAAAGCCATGGCGACATTCTGATCTTTATGAGCGGCGAGCGGGAAATCCGCGATACCGCCGATGCGCTGAACAAGCT > NC_000913/1483736‑1483998 | aTTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCTATCCGGTGGAAGTGCGCTATCGCCCGATTGTTGAAGAAGCCGATGACGCCGAgcg < 2:48413/140‑1 (MQ=255) aCTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCTATCCGGTGGAAGTGCGCTATCGCCCGATTGTTGAAGAAGCCGATGACGCCGAGCGCGATCAGTTGCAGGCGATTTTTGACGCCGTAGACGAACTGAGt < 1:264948/140‑1 (MQ=255) aCTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCTATCCGGTGGAAGTGCGCTATCGCCCGATTGTTGAAGAAGCCGATGACGCCGAGCGCGATCAGTTGCAGGCGATTTTTGACGCCGTAGACGAACTGAGt > 2:264948/1‑140 (MQ=255) cgcCGATTATTGAAGTCTCCGGTCGGACCTATCCGGTGGAAGTGCGCTATCGCCCGATTGTTGAAGAAGCCGATGACGCCGAGCGCGATCAGTTGCAGGCGATTTTTGACGCCGTAGACGAACTGAGTCAGGAAAGCCAt > 2:200559/1‑140 (MQ=255) gATTATTGAAGTCTCCGGTCGGACCTATCCGGTGGAAGTGCGCTATCGCCCGATTGTTGAAGAAGCCGATGACGCCGAGCGCGATCAGTTGCAGGCGATTTTTGACGCCGTAGACGAACTGAGTCAGGAAAGCCATGGCg < 1:200559/140‑1 (MQ=255) tGGAAGTGCGCTATCGCCCGATTGTTGAAGAAGCCGATGACGCCGAGCGCGATCAGTTGCAGGCGATTTTTGACGCCGTAGACGAACTGAGTCAGGAAAGCCATGGCGACATTCTGATCTTTATGAGCGGCGAGCGGGaa > 1:243554/1‑140 (MQ=255) tCGCCCGATTGTTGAAGAAGCCGATGACGCCGAGCGCGATCAGTTGCAGGCGATTTTTGACGCCGTAGACGAACTGAGTCAGGAAAGCCATGGCGACATTCTGATCTTTATGAGCGGCGAGCggg < 1:191580/125‑1 (MQ=255) tCGCCCGATTGTTGAAGAAGCCGATGACGCCGAGCGCGATCAGTTGCAGGCGATTTTTGACGCCGTAGACGAACTGAGTCAGGAAAGCCATGGCGACATTCTGATCTTTATGAGCGGCGAGCggg > 2:191580/1‑125 (MQ=255) ttgttgAAGAAGCCGATGACGCCGAGCGCGATCAGTTGCAGGCGATTTTTGACGCCGTAGACGAACTGAGTCAGGAAAGCCATGGCGACATTCTGATCTTTATGAGCGGCGAGCGGGAAATCCGCGATACCGCCGATgcg > 2:70501/1‑140 (MQ=255) gCCGATGACGCCGAGCGCGATCAGTTGCAGGCGATTTTTGACGCCGTAGACGAACTGAGTCAGGAAAGCCATGGCGACATTCTGATCTTTATGAGCGGCGAGCGGGAAATCCGCGATACCGCCGATGCGCTGAACAAGCt < 1:70501/140‑1 (MQ=255) | ATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCTATCCGGTGGAAGTGCGCTATCGCCCGATTGTTGAAGAAGCCGATGACACCGAGCGCGATCAGTTGCAGGCGATTTTTGACGCCGTAGACGAACTGAGTCAGGAAAGCCATGGCGACATTCTGATCTTTATGAGCGGCGAGCGGGAAATCCGCGATACCGCCGATGCGCTGAACAAGCT > NC_000913/1483736‑1483998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |