| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,881,629 | T→C | M172V (ATG→GTG) | casC ← | type I‑E CRISPR system Cascade subunit CasC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,881,629 | 0 | T | C | 100.0% | 49.7 / NA | 15 | M172V (ATG→GTG) | casC | type I‑E CRISPR system Cascade subunit CasC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (6/9); total (6/9) | |||||||||||
GAGTTCCCAGATGTGCAGAACCTTGTTCCTGTAAATCATCTACAGCGGTGAACCAGTCAATATCAGAATCAACCTGATGAGTAGTGATCGCATGCGCAATGGACATTGCACCATCAACTTTTCCCAACTCAGTCATCATGCCGCTGGTTGCCATTCTTCCACTAAGCGCAATATCAACACCCTGCTGTAAATTCACACGTATGGCGGCAATATCTTCCTTAAGAACTTTGAGCAGCTTTTTATCATCCAGATTATCAGCCTCTGC > NC_000913/2881494‑2881758 | gAGTTCCCAGATGTGCAGAACCTTGTTCCTGTAAATCATCTACAGCGGTGAACCAGTCAATATCAGAATCAACCTGATGAGTAGTGATCGCATGCGCAATGGACATTGCACCATCAACTTTTCCCAACTCAGTCACCATg < 2:278099/140‑1 (MQ=255) gtgCAGAACCTTGTTCCTGTAAATCATCTACAGCGGTGAACCAGTCAATATCAGAATCAACCTGATGAGTAGTGATCGCATGCGCAATGGACATTGCACCATCAACTTTTCCCAACTCAGTCACCATGCCGCTGGTTGcc < 2:11303/140‑1 (MQ=255) cAGAACCTTGTTCCTGTAAATCATCTACAGCGGTGAACCAGTCAATATCAGAATCAACCTGATGAGTAGTGATCGCATGCGCAATGGACATTGCACCATCAACTTTTCCCAACTCAGTCACCATGCCGCTGGTTGCCAtt > 2:25086/1‑140 (MQ=255) tGTAAATCATCTACAGCGGTGAACCAGTCAATATCAGAATCAACCTGATGAGTAGTGATCGCATGCGCAATGGACATTGCACCATCAACTTTTCCCAACTCAGTCACCATGCCGCTGGTTGCCATTCTTCCACTAAgcgc < 2:182359/140‑1 (MQ=255) tGTAAATCATCTACAGCGGTGAACCAGTCAATATCAGAATCAACCTGATGAGTAGTGATCGCATGCGCAATGGACATTGCACCATCAACTTTTCCCAACTCAGTCACCATGCCGCTGGTTGCCATTCTTCCACTAAgcgc < 2:41184/140‑1 (MQ=255) cGGTGAACCAGTCAATATCAGAATCAACCTGATGAGTAGTGATCGCATGCGCAATGGACATTGCACCATCAACTTTTCCCAACTCAGTCACCATGCCGCTGGTTGCCATTCTTCCACTAAgc > 1:75616/1‑122 (MQ=255) cGGTGAACCAGTCAATATCAGAATCAACCTGATGAGTAGTGATCGCATGCGCAATGGACATTGCACCATCAACTTTTCCCAACTCAGTCACCATGCCGCTGGTTGCCATTCTTCCACTAAgc < 2:75616/122‑1 (MQ=255) tGAACCAGTCAATATCAGAATCAACCTGATGAGTAGTGATCGCATGCGCAATGGACATTGCACCATCAACTTTTCCCAACTCAGTCACCATGCCGCTGGTTGCCATTCTTCCACTAAGCGCAATATCAACACCCTGCTGt > 2:84120/1‑140 (MQ=255) gAACCAGTCAATATCAGAATCAACCTGATGAGTAGTGATCGCATGCGCAATGGACATTGCACCATCAACTTTTCCCAACTCAGTCACCATGCCGCTGGTTGCCATTCTTCCACTAAGCGCAATATCAACACCCTGCTGTa < 1:325707/140‑1 (MQ=255) tCAGAATCAACCTGATGAGTAGTGATCGCATGCGCAATGGACATTGCACCATCAACTTTTCCCAACTCAGTCACCATGCCGCTGGTTGCCATTCTTCCACTAAGCGCAATATCAACACCCTGCTGTAAATTCACACGTAt < 1:84120/140‑1 (MQ=255) tgaGTAGTGATCGCATGCGCAATGGACATTGCACCATCAACTTTTCCCAACTCAGTCACCATGCCGCTGGTTGCCATTCTTCCACTAAGCGCAATATCAACACCCTGCTGTAAATTCACACGTATGGCGGCAATATCTTc < 1:25086/140‑1 (MQ=255) tagtGATCGCATGCGCAATGGACATTGCACCATCAACTTTTCCCAACTCAGTCACCATGCCGCTGGTTGCCATTCTTCCACTAAGCGCAATATCAACACCCTGCTGTAAATTCACACGTATGGCGGCAATATCTTCCTTa > 1:40394/1‑140 (MQ=255) aTCGCATGCGCAATGGACATTGCACCATCAACTTTTCCCAACTCAGTCACCATGCCGCTGGTTGCCATTCTTCCACTAAGCGCAATATCAACACCCTGCTGTAAATTCACACGTATGGCGGCAATATCTTCCTTAGGAAc > 2:326807/1‑140 (MQ=255) tGCGCAATGGACATTGCACCATCAACTTTTCCCAACTCAGTCACCATGCCGCTGGTTGCCATTCTTCCACTAAGCGCAATATCAACACCCTGCTGTAAATTCACACGTATGGCGGCAATATCTTCCTTAAGAACTTTGag < 1:326807/140‑1 (MQ=255) aattCAGTCACCATGCCGCTGGTTGCCATTCTTCCACTAAGCGCAATATCAACACCCTGCTGTAAATTCACACGTATGGCGGCAATATCTTCCTTAAGAACTTTGAGCAGCTTTTTATCATCCAGATTATCAGCCTCTGc > 1:36354/4‑140 (MQ=255) | GAGTTCCCAGATGTGCAGAACCTTGTTCCTGTAAATCATCTACAGCGGTGAACCAGTCAATATCAGAATCAACCTGATGAGTAGTGATCGCATGCGCAATGGACATTGCACCATCAACTTTTCCCAACTCAGTCATCATGCCGCTGGTTGCCATTCTTCCACTAAGCGCAATATCAACACCCTGCTGTAAATTCACACGTATGGCGGCAATATCTTCCTTAAGAACTTTGAGCAGCTTTTTATCATCCAGATTATCAGCCTCTGC > NC_000913/2881494‑2881758 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |