BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,268,304	(C)_6→7	coding (451/540 nt)	yhaB →	protein YhaB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,268,298	1	.	C	100.0%	329.4 / NA	88	T149P (ACC→CCC)	yhaB	protein YhaB
Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (44/44); total (44/44)

Only 100 of 104 total aligned reads displayed.

ACAAACATTAGATGTAGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑A‑CCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAGGATAAAATAATGTTCCCTGTTTCAT  >  NC_000913/3268159‑3268430

aCAAACATTAGATGTAGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTa‑a                                                                                                                                       >  1:646420/1‑140 (MQ=255)

aCAAACATTAGATGTAGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTa‑a                                                                                                                                       >  1:584994/1‑140 (MQ=255)

aCAAACATTAGATGTAGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTa‑a                                                                                                                                       >  2:12363/1‑140 (MQ=255)

aCAAACATTAGATGTAGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTa‑a                                                                                                                                       >  2:303309/1‑140 (MQ=255)

 cAAACATTAGATGTAGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAGTAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑A‑c                                                                                                                                     >  2:2793/1‑140 (MQ=255)

 cAAACATTAGATGTAGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑A‑c                                                                                                                                     >  2:113674/1‑140 (MQ=255)

  aaaCATTAGATGTAGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑A‑cc                                                                                                                                    <  2:584994/140‑1 (MQ=255)

      aTTAGATGTAGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑A‑cccccc                                                                                                                                >  2:1111539/1‑140 (MQ=255)

      aTTAGATGTAGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑A‑cccccc                                                                                                                                >  2:317822/1‑140 (MQ=255)

         aGATGTAGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑A‑ccccccctt                                                                                                                             >  1:644682/1‑137 (MQ=255)

            tGTAGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTtgtg                                                                                                                           <  1:885603/140‑1 (MQ=255)

               aGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCAc                                                                                                                        >  1:965178/1‑140 (MQ=255)

               aGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCAc                                                                                                                        >  1:349170/1‑140 (MQ=255)

               aGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑A‑cccc                                                                                                                                  >  2:893702/1‑129 (MQ=255)

               aGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑A‑cccc                                                                                                                                  <  1:893702/129‑1 (MQ=255)

                ggCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTtgtg                                                                                                                           >  1:354108/1‑136 (MQ=255)

                ggCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTtgtg                                                                                                                           <  2:354108/136‑1 (MQ=255)

                ggCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACt                                                                                                                       >  2:318361/1‑140 (MQ=255)

                ggCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACt                                                                                                                       <  2:827505/140‑1 (MQ=255)

                ggCACTTTTACACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACt                                                                                                                       >  2:364944/1‑140 (MQ=255)

                  cACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACttt                                                                                                                     >  1:882671/1‑140 (MQ=255)

                     ttttGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTtaat                                                                                                                  >  2:561672/1‑140 (MQ=255)

                          cACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAAc                                                                                                             <  1:1076885/140‑1 (MQ=255)

                          cACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAAc                                                                                                             <  1:655450/140‑1 (MQ=255)

                           aCCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAAcc                                                                                                            <  2:350864/140‑1 (MQ=255)

                           aCCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAAcc                                                                                                            <  2:646420/140‑1 (MQ=255)

                               tttGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCa                                                                                                        >  1:803847/1‑140 (MQ=255)

                               tttGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCa                                                                                                        >  1:724868/1‑140 (MQ=255)

                               tttGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCa                                                                                                        <  2:836267/140‑1 (MQ=255)

                               tttGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCa                                                                                                        <  2:372979/140‑1 (MQ=255)

                               tttGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCa                                                                                                        <  1:318361/140‑1 (MQ=255)

                                ttGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCAt                                                                                                       <  1:74056/140‑1 (MQ=255)

                                ttGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCAt                                                                                                       <  1:825822/140‑1 (MQ=255)

                                 tGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTACC‑CCCCCCTTGTGCACTTTAATAAAAc                                                                                                             >  1:716291/1‑133 (MQ=255)

                                 tGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAAc                                                                                                             <  2:716291/133‑1 (MQ=255)

                                         aaTGTACTTGCTCAGCCGTCAGTAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGa                                                                                              <  1:2793/140‑1 (MQ=255)

                                         aaTGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGa                                                                                              <  2:16168/140‑1 (MQ=255)

                                         aaTGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGa                                                                                              >  1:42448/1‑140 (MQ=255)

                                           tGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGAtt                                                                                            >  2:910561/1‑140 (MQ=255)

                                           tGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGAtt                                                                                            >  1:1087061/1‑140 (MQ=255)

                                                ttGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCAt                                                                                                       <  1:1112108/124‑1 (MQ=255)

                                                ttGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCAt                                                                                                       >  2:1112108/1‑124 (MQ=255)

                                                  gCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCa                                                                                     >  2:1111743/1‑140 (MQ=255)

                                                   cTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCaa                                                                                    >  2:431792/1‑140 (MQ=255)

                                                   cTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCaa                                                                                    >  2:428871/1‑140 (MQ=255)

                                                   cTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCaa                                                                                    >  1:128830/1‑140 (MQ=255)

                                                    tCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCaaa                                                                                   <  1:910561/140‑1 (MQ=255)

                                                     cAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGa                                                                                              <  2:568353/128‑1 (MQ=255)

                                                     cAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGa                                                                                              >  1:71667/1‑128 (MQ=255)

                                                     cAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGa                                                                                              <  2:71667/128‑1 (MQ=255)

                                                     cAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGa                                                                                              >  1:568353/1‑128 (MQ=255)

                                                     cAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAAt                                                                                  >  2:661306/1‑140 (MQ=255)

                                                         cGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATtctc                                                                              <  1:763186/140‑1 (MQ=255)

                                                         cGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATtctc                                                                              <  1:303309/140‑1 (MQ=255)

                                                          gTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTctct                                                                             >  1:465590/1‑140 (MQ=255)

                                                            cAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCttt                                                                           >  2:262779/1‑140 (MQ=255)

                                                                aaaaaaGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCttttttt                                                                       <  2:803847/140‑1 (MQ=255)

                                                                      gagCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCg                                                                 <  2:128830/140‑1 (MQ=255)

                                                                       agCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAAtt                                                                                 >  1:838276/1‑123 (MQ=255)

                                                                       agCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAAtt                                                                                 <  2:838276/123‑1 (MQ=255)

                                                                       agCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGa                                                                <  1:431792/140‑1 (MQ=255)

                                                                       agCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGa                                                                <  1:428871/140‑1 (MQ=255)

                                                                        gCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGAt                                                               <  2:578512/140‑1 (MQ=255)

                                                                        gCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGAt                                                               <  1:262779/140‑1 (MQ=255)

                                                                         cTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATc                                                              >  1:993538/1‑140 (MQ=255)

                                                                            gAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCAtt                                                           >  2:135289/1‑140 (MQ=255)

                                                                              aTGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCAtttt                                                         <  2:724868/140‑1 (MQ=255)

                                                                                 tATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGACTGTTGGCAAATTCTCTTTTTTTCAc                                                                    >  2:566641/1‑126 (MQ=255)

                                                                                 tATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGACTGTTGGCAAATTCTCTTTTTTTCAc                                                                    <  1:566641/126‑1 (MQ=255)

                                                                                  aTTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTtaata                                                     <  2:349170/140‑1 (MQ=255)

                                                                                           aCGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGAttttt                                            >  1:3414/1‑140 (MQ=255)

                                                                                           aCGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGAttttt                                            >  1:64982/1‑140 (MQ=255)

                                                                                           aCGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGAttttt                                            >  2:265039/1‑140 (MQ=255)

                                                                                           aCGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGAACATTTTAATAATGAttttt                                            >  1:400494/1‑140 (MQ=255)

                                                                                           aCGACTTCTAAGTATTGTGCAAATTTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCACCTTTACTTCACATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGAttttt                                            >  2:686129/1‑140 (MQ=255)

                                                                                             caTTTCTAAGTATTTTGCCAAATTCACCCGAAAAGAAGCCATTTTA‑ACCCCCCCTTGTTCACTTTTATAAAACCAGGATTACTTCAGATTTGTGGGAAATTCTCTTTTTTTCACCCGAACATTTTAATAATGATTTTTAt                                          <  2:1053667/139‑1 (MQ=255)

                                                                                                 tCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGat                                      <  2:654887/140‑1 (MQ=255)

                                                                                                 tCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGat                                      <  2:878970/140‑1 (MQ=255)

                                                                                                       tATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGAttattta                                >  1:48437/1‑140 (MQ=255)

                                                                                                         ttGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTtata                              <  2:19781/140‑1 (MQ=255)

                                                                                                           gtgCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATaaa                            >  1:1052709/1‑140 (MQ=255)

                                                                                                           gtgCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATaaa                            <  1:63884/140‑1 (MQ=255)

                                                                                                            tgCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTtata                              >  1:973750/1‑137 (MQ=255)

                                                                                                            tgCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTtata                              <  1:372539/137‑1 (MQ=255)

                                                                                                            tgCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTtata                              >  2:372539/1‑137 (MQ=255)

                                                                                                            tgCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATaaa                            >  1:837923/1‑139 (MQ=255)

                                                                                                            tgCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATaaa                            >  1:748131/1‑139 (MQ=255)

                                                                                                            tgCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATaaa                            <  2:837923/139‑1 (MQ=255)

                                                                                                            tgCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATaaa                            <  2:232506/139‑1 (MQ=255)

                                                                                                            tgCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATaaa                            <  2:748131/139‑1 (MQ=255)

                                                                                                            tgCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATaaa                            >  1:232506/1‑139 (MQ=255)

                                                                                                            tgCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAg                           >  2:526216/1‑140 (MQ=255)

                                                                                                            tgCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAg                           >  1:255200/1‑140 (MQ=255)

                                                                                                            tgCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAg                           >  2:649048/1‑140 (MQ=255)

                                                                                                            tgCAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAg                           >  1:163581/1‑140 (MQ=255)

                                                                                                              cAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAGGa                         <  2:644682/140‑1 (MQ=255)

                                                                                                              cAAAATTCACCCGAAAAGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGAACATTTTAATAATGATTTTTATTGATTATTTATAAAGGa                         <  2:400494/140‑1 (MQ=255)

                                                                                                                           aaaaGAAGCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAGGATAAAATAATGTTc            <  2:686843/140‑1 (MQ=255)

                                                                                                                             aagaagCCATCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAGGATAAAATAATGTTccc          >  1:1061084/1‑140 (MQ=255)

                                                                                                                                     aTCTTA‑ACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAGGATAAAATAATGTTCCCTGTTtcat  >  1:68661/1‑140 (MQ=255)

ACAAACATTAGATGTAGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTA‑A‑CCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAGGATAAAATAATGTTCCCTGTTTCAT  >  NC_000913/3268159‑3268430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`