BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,532,835	T→C	G6G (GGT→GGC)	pck →	phosphoenolpyruvate carboxykinase (ATP)

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,532,835	0	T	C	100.0%	417.8 / NA	110	G6G (GGT→GGC)	pck	phosphoenolpyruvate carboxykinase (ATP)
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (53/57); total (53/57)

Only 100 of 110 total aligned reads displayed.

AGTTTTTTGTCAAATATGAATTTCTCCAGATACGTAAATCTATGAGCCTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGTTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAA  >  NC_000913/3532701‑3532969

aGTTTTTTGTCAAATATGAATTTCTCCAGATACGTAAATCTATGAGCCTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGAc                                                                                                                                   <  2:558542/140‑1 (MQ=255)

    ttttGTCAAATATGAATTTCTCCAGATACGTAAATCTATGAGCCTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCg                                                                                                                               >  1:343619/1‑140 (MQ=255)

      ttGTCAAATATGAATTTCTCCAGATACGTAAATCTATGAGCCTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCa                                                                                                                             <  1:649970/140‑1 (MQ=255)

            aaTATGAATTTCTCCAGATACGTAAATCTATGAGCCTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACt                                                                                                                       >  1:679287/1‑140 (MQ=255)

             atatGAATTTCTCCAGATACGTAAATCTATGAGCCTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTc                                                                                                                      <  1:624325/140‑1 (MQ=255)

             atatGAATTTCTCCAGATACGTAAATCTATGAGCCTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTc                                                                                                                      <  2:343619/140‑1 (MQ=255)

               atGAATTTCTCCAGATACGTAAATCTATGAGCCTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGa                                                                                                                    <  1:718443/140‑1 (MQ=255)

                     ttCTCCAGATACGTAAATCTATGAGCCTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTa                                                                                                              <  1:1094097/140‑1 (MQ=255)

                       ctcCAGATACGTAAATCTATGAGCCTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTAt                                                                                                             <  1:15542/139‑1 (MQ=255)

                       ctcCAGATACGTAAATCTATGAGCCTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTAt                                                                                                             >  2:15542/1‑139 (MQ=255)

                       ctcCAGATACGTAAATCTATGAGCCTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATg                                                                                                            >  1:110955/1‑140 (MQ=255)

                       ctcCAGATACGTAAATCTATGAGCCTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATg                                                                                                            >  2:410239/1‑140 (MQ=255)

                        tcCAGATACGTAAATCTATGAGCCTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAg                                                                                                                   <  1:1049238/132‑1 (MQ=255)

                        tcCAGATACGTAAATCTATGAGCCTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAg                                                                                                                   >  2:1049238/1‑132 (MQ=255)

                        tcCAGATACGTAAATCTATGAGCCTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAg                                                                                                                   <  1:252886/132‑1 (MQ=255)

                             aTACGTAAATCTATGAGCCTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCa                                                                                                      <  2:191650/140‑1 (MQ=255)

                                cGTAAATCTATGAGCCTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTg                                                                                                   <  2:322194/140‑1 (MQ=255)

                                cGTAAATCTATGAGCCTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTg                                                                                                   <  1:410239/140‑1 (MQ=255)

                                  tAAATCTATGAGCCTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGAc                                                                                                 >  2:837556/1‑140 (MQ=255)

                                     aTCTATGAGCCTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTa                                                                                              <  1:712631/140‑1 (MQ=255)

                                      tCTATGAGCCTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTAc                                                                                             >  1:900000/1‑140 (MQ=255)

                                         aTGAGCCTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATg                                                                                          <  1:579555/140‑1 (MQ=255)

                                          tGAGCCTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGa                                                                                         >  1:712764/1‑140 (MQ=255)

                                          tGAGCCTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGa                                                                                         >  1:788892/1‑140 (MQ=255)

                                          tGAGCCTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGa                                                                                         >  1:1052004/1‑140 (MQ=255)

                                              ccTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATc                                                                                     <  1:371107/140‑1 (MQ=255)

                                               cTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCg                                                                                    >  1:675038/1‑140 (MQ=255)

                                                ttGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGt                                                                                   >  2:650014/1‑140 (MQ=255)

                                                ttGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGt                                                                                   >  1:1133964/1‑140 (MQ=255)

                                                 tGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTAc                                                                                             >  2:190048/1‑129 (MQ=255)

                                                 tGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTAc                                                                                             <  1:190048/129‑1 (MQ=255)

                                                 tGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGtt                                                                                  >  1:954140/1‑140 (MQ=255)

                                                 tGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGtt                                                                                  >  1:86213/1‑140 (MQ=255)

                                                 tGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATAACGtt                                                                                  >  2:1059224/1‑140 (MQ=255)

                                                        gTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAAcc                                                                           <  2:789931/140‑1 (MQ=255)

                                                        gTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAAcc                                                                           <  2:679287/140‑1 (MQ=255)

                                                        gTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAAcc                                                                           <  1:650014/140‑1 (MQ=255)

                                                         ttAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAAccc                                                                          <  1:1059224/140‑1 (MQ=255)

                                                           aaCACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCaa                                                                        >  2:59992/1‑140 (MQ=255)

                                                             cacCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGc                                                                      >  2:974881/1‑140 (MQ=255)

                                                             cacCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGc                                                                      >  1:213372/1‑140 (MQ=255)

                                                                ccccAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTAc                                                                   >  2:92301/1‑140 (MQ=255)

                                                                 cccAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACg                                                                  >  2:920292/1‑140 (MQ=255)

                                                                 cccAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGACTTGACCCAGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACg                                                                  <  1:53457/140‑1 (MQ=255)

                                                                  ccAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGa                                                                 <  2:788892/140‑1 (MQ=255)

                                                                  ccAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGa                                                                 >  2:662139/1‑140 (MQ=255)

                                                                   cAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGAc                                                                <  2:712764/140‑1 (MQ=255)

                                                                     aaaaGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACct                                                              >  1:828538/1‑140 (MQ=255)

                                                                      aaaGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACctg                                                             <  1:837556/140‑1 (MQ=255)

                                                                        aGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACctgct                                                           <  2:454310/140‑1 (MQ=255)

                                                                        aGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACctgct                                                           <  1:974881/140‑1 (MQ=255)

                                                                        aGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACctgct                                                           <  1:221438/140‑1 (MQ=255)

                                                                            tttACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACctg                                                             <  1:1147047/134‑1 (MQ=255)

                                                                            tttACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACctg                                                             >  2:1147047/1‑134 (MQ=255)

                                                                            tttACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTAt                                                       <  1:662139/140‑1 (MQ=255)

                                                                             ttACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATc                                                      >  2:434492/1‑140 (MQ=255)

                                                                                    tCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAaga                                               >  2:844712/1‑140 (MQ=255)

                                                                                      aGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGc                                             >  1:312003/1‑140 (MQ=255)

                                                                                       ggCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCt                                            <  1:1110946/140‑1 (MQ=255)

                                                                                           aTACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGAt                                        >  2:1106101/1‑140 (MQ=255)

                                                                                             aCATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATcc                                      >  2:423931/1‑140 (MQ=255)

                                                                                              cATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCg                                     <  1:1106101/140‑1 (MQ=255)

                                                                                              cATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCg                                     <  2:1133964/140‑1 (MQ=255)

                                                                                                tatTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGGACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAg                                   >  2:1030952/1‑140 (MQ=255)

                                                                                                 atTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCACAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGAt                                        <  2:167307/134‑1 (MQ=255)

                                                                                                 atTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCACAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGAt                                        >  1:167307/1‑134 (MQ=255)

                                                                                                  ttGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGcc                                 >  2:427866/1‑140 (MQ=255)

                                                                                                  ttGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGcc                                 >  1:334178/1‑140 (MQ=255)

                                                                                                  ttGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGcc                                 >  2:235320/1‑140 (MQ=255)

                                                                                                   tGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCt                                <  2:675038/140‑1 (MQ=255)

                                                                                                   tGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCt                                <  1:427866/140‑1 (MQ=255)

                                                                                                     gCTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGa                              <  2:86213/140‑1 (MQ=255)

                                                                                                      cTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGAc                             >  2:174084/1‑140 (MQ=255)

                                                                                                      cTAAGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGAc                             >  2:1031130/1‑140 (MQ=255)

                                                                                                        aaGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAg                           >  1:565011/1‑140 (MQ=255)

                                                                                                        aaGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCAAAGCTACGACCTGCTGTATCAGGAAGAGCTCGAt                                        <  1:557698/127‑1 (MQ=255)

                                                                                                        aaGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCAAAGCTACGACCTGCTGTATCAGGAAGAGCTCGAt                                        >  2:557698/1‑127 (MQ=255)

                                                                                                         aGGAGCAGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAgg                          >  1:395396/1‑140 (MQ=255)

                                                                                                               aGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGa                              <  1:691075/130‑1 (MQ=255)

                                                                                                               aGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGa                              <  2:1135100/130‑1 (MQ=255)

                                                                                                               aGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGa                              >  2:691075/1‑130 (MQ=255)

                                                                                                               aGTGAAATGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGa                    >  2:316533/1‑140 (MQ=255)

                                                                                                                    aaTGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGcgcg               <  1:923660/140‑1 (MQ=255)

                                                                                                                     aTGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCgg              <  1:222851/140‑1 (MQ=255)

                                                                                                                      tGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGcgcg               <  1:220010/138‑1 (MQ=255)

                                                                                                                      tGCGCGTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGcgcg               >  2:220010/1‑138 (MQ=255)

                                                                                                                        cgcgTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGgt           <  2:334178/140‑1 (MQ=255)

                                                                                                                        cgcgTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGgt           <  2:828538/140‑1 (MQ=255)

                                                                                                                        cgcgTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGgt           >  1:389811/1‑140 (MQ=255)

                                                                                                                        cgcgTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGgt           <  1:59992/140‑1 (MQ=255)

                                                                                                                        cgcgTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGgt           <  2:110955/140‑1 (MQ=255)

                                                                                                                        cgcgTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGgt           <  2:676203/140‑1 (MQ=255)

                                                                                                                         gcgTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGgtg          <  2:1052004/140‑1 (MQ=255)

                                                                                                                         gcgTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGgtg          <  2:954140/140‑1 (MQ=255)

                                                                                                                          cgTTAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGgtgt         >  1:1014816/1‑140 (MQ=255)

                                                                                                                             tAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTaa      <  1:273189/140‑1 (MQ=255)

                                                                                                                             tAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTaa      <  1:174084/140‑1 (MQ=255)

                                                                                                                             tAACAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTaa      <  1:1031130/140‑1 (MQ=255)

                                                                                                                                cAATGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTa   >  1:152688/1‑140 (MQ=255)

                                                                                                                                 aaTGGCTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTaa  <  2:387690/140‑1 (MQ=255)

AGTTTTTTGTCAAATATGAATTTCTCCAGATACGTAAATCTATGAGCCTTGTCGCGGTTAACACCCCCAAAAAGACTTTACTATTCAGGCAATACATATTGGCTAAGGAGCAGTGAAATGCGCGTTAACAATGGTTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAA  >  NC_000913/3532701‑3532969

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`