| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,477,486 | T→C | intergenic (‑67/‑154) | fkpA ← / → slyX | peptidyl‑prolyl cis‑trans isomerase FkpA/protein SlyX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,477,486 | 0 | T | C | 100.0% | 27.2 / NA | 9 | intergenic (‑67/‑154) | fkpA/slyX | peptidyl‑prolyl cis‑trans isomerase FkpA/protein SlyX |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (5/4); total (5/4) | |||||||||||
AAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAACTATTATCAGAAGGGTACTATAAAGCGTTGTCGAACAAATCTACATACAGACACGCCCTATTATCATCTATTTTCAGACTCTTTTTGTTTAAATTAGTTTCGATGACCGCGAAATGAGTGCTGTCTCGGGCAGCAAAGTTAAGTAGAATCCGC > NC_000913/3477350‑3477611 | aaGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAACTATTATCAGAAGGGTACTATAAAGCGCTGt > 1:29957/1‑140 (MQ=255) aCGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAACTATTATCAGAAGGGTACTATAAAGCGCTGTCGAACAAATCTACATACAGacac < 2:29957/140‑1 (MQ=255) gcGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAACTATTATCAGAAGGGTACTATAAAGCGCTGTCGAACAAATCTACATACAGACACGCCCTATTATCATCTATTTTCa < 2:356065/140‑1 (MQ=255) ggggCATCTCACCCCAGGGTTAACTATTATCAGAAGGGTACTATAAAGCGCTGTCGAACAAATCTACATACAGACACGCCCTATTATCATCTATTTTCAGACTCTTTTTGTTTAAATTAGTTTCGATGACCGCGAAATGa > 1:22739/1‑140 (MQ=255) gCATCTCACCCCAGGGTTAACTATTATCAGAAGGGTACTATAAAGCGCTGTCGAACAAATCTACATACAGACACGCCCTATTATCATCTATTTTCAGACTCTTTTTGTTTAAATTAGTTTCGATGACCGCGAAATGAGTg < 2:237730/140‑1 (MQ=255) aCCCCAGGGTTAACTATTATCAGAAGGGTACTATAAAGCGCTGTCGAACAAATCTACATACAGACACGCCCTATTATCATCTATTTTCAGACTCTTTTTGTTTAAATTAGTTTCGATGACCGCGAAATGAGTg > 1:67808/1‑133 (MQ=255) aCCCCAGGGTTAACTATTATCAGAAGGGTACTATAAAGCGCTGTCGAACAAATCTACATACAGACACGCCCTATTATCATCTATTTTCAGACTCTTTTTGTTTAAATTAGTTTCGATGACCGCGAAATGAGTg < 2:67808/133‑1 (MQ=255) aGGGTACTATAAAGCGCTGTCGAACAAATCTACATACAGACACGCCCTATTATCATCTATTTTCAGACTCTTTTTGTTTAAATTAGTTTCGATGACCGCGAAATGAGTGCTGTCTCGGGCAGCAAAGTTAAGTAGAATcc > 2:355721/1‑140 (MQ=255) ggTACTATAAAGCGCTGTCGAACAAATCTACATACAGACACGCCCTATTATCATCTATTTTCAGACTCTTTTTGTTTAAATTAGTTTCGATGACCGCGAAATGAGTGCTGTCTCGGGCAGCAAAGTTAAGTAGAATCcgc > 1:212571/1‑140 (MQ=255) | AAGTGATTGGTGCATGCAGGGCAACGGCCATTGTGGTCGCCAGCAGCGTTACTTTAAACAGTGATTTCATCCATATCTCCAGGATCGGGGCATCTCACCCCAGGGTTAACTATTATCAGAAGGGTACTATAAAGCGTTGTCGAACAAATCTACATACAGACACGCCCTATTATCATCTATTTTCAGACTCTTTTTGTTTAAATTAGTTTCGATGACCGCGAAATGAGTGCTGTCTCGGGCAGCAAAGTTAAGTAGAATCCGC > NC_000913/3477350‑3477611 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |