Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	885,305	T→C	intergenic (‑75/+11)	ybjH ← / ← ybjI	uncharacterized protein YbjH/5‑amino‑6‑(5‑phospho‑D‑ribitylamino)uracil phosphatase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	885,305	0	T	C	100.0%	41.9 / NA	13	intergenic (‑75/+11)	ybjH/ybjI	uncharacterized protein YbjH/5‑amino‑6‑(5‑phospho‑D‑ribitylamino)uracil phosphatase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (6/7);  total (6/7)

CCCATTAAAAGCGCGCCCAACAGTAGACAATTTTTCATAATCATTTCGCCTGAAATAATGCAGCGGGTTAATTTCCGCGAATTATGCAGCCTTCATTCAGGCATTGTGTTGCCGGGCGTGCTGCCGGTTTTATTGGTCAAATGGCGCTTCGTGTTTAAGAACTTTATCGATCACATCCAGTACGCCTTCACGGTTATTGGAGCCTGCGCGGTATTTTGCCGCTGCGACGACCGCGCTACCGGCATTTTCCA  >  NC_000913/885187‑885437                                                                                                                       |                                                                                                                                     cccATTAAAAGCGCGCCCAACAGTAGACAATTTTTCATAATCATTTCGCCTGAAATAATGCAGCGGGTTAATTTCCGCGAATTATGCAGCCTTCATTCAGGCATTGTGTTGCCGGGCGCGCTGCCGGTTTTATTGGTCaa                                                                                                                 >  2:268536/1‑140 (MQ=255)     ttAAAAGCGCGCCCAACAGTAGACAATTTTTCATAATCATTTCGCCTGAAATAATGCAGCGGGTTAATTTCCGCGAATTATGCAGCCTTCATTCAGGCATTGTGTTGCCGGGCGCGCTGCCGGTTTTATTGGTCAAATgg                                                                                                             <  2:161779/140‑1 (MQ=255)     ttAAAAGCGCGCCCAACAGTAGACAATTTTTCATAATCATTTCGCCTGAAATAATGCAGCGGGTTAATTTCCGCGAATTATGCAGCCTTCATTCAGGCATTGTGTTGCCGGGCGCGCTGCCGGTTTTATTGGTCAAATgg                                                                                                             >  2:42411/1‑140 (MQ=255)         aaGCGCGCCCAACAGTAGACAATTTTTCATAATCATTTCGCCTGAAATAATGCAGCGGGTTAATTTCCGCGAATTATGCAGCCTTCATTCAGGCATTGTGTTGCCGGGCGCGCTGCCGGTTTTATTGGTCAAATGGCGCt                                                                                                         <  1:175751/140‑1 (MQ=255)         aaGCGCGCCCAACAGTAGACAATTTTTCATAATCATTTCGCCTGAAATAATGCAGCGGGTTAATTTCCGCGAATTATGCAGCCTTCATTCAGGCATTGTGTTGCCGGGCGCGCTGCCGGTTTTATTGGTCAAATGGCGCt                                                                                                         <  1:310149/140‑1 (MQ=255)                      aGTAGACAATTTTTCATAATCATTTCGCCTGAAATAATGCAGCGGGTTAATTTCCGCGAATTATGCAGCCTTCATTCAGGCATTGTGTTGCCGGGCGCGCTGCCGGTTTTATTGGTCAAATGGCGCTTCGTGTTTAAGaa                                                                                            >  1:326740/1‑140 (MQ=255)                      aGTAGACAATTTTTCATAATCATTTCGCCTGAAATAATGCAGCGGGTTAATTTCCGCGAATTATGCAGCCTTCATTCAGGCATTGTGTTGCCGGGCGCGCTGCCGGTTTTATTGGTCAAATGGCGCTTCGTGTTTAAGaa                                                                                            <  1:42411/140‑1 (MQ=255)                         aGACAATTTTTCATAATCATTTCGCCTGAAATAATGCAGCGGGTTAATTTCCGCGAATTATGCAGCCTTCATTCAGGCATTGTGTTGCCGGGCGCGCTGCCGGTTTTATTGGTCAAATGGCGCTTCGTGTTTAAGAACtt                                                                                         >  2:227882/1‑140 (MQ=255)                              aTTTTTCATAATCATTTCGCCTGAAATAATGCAGCGGGTTAATTTCCGCGAATTATGCAGCCTTCATTCAGGCATTGTGTTGCCGGGCGCGCTGCCGGTTTTATTGGTCAAATGGCGCTTCGTGTTTAAGAACTTTATCg                                                                                    <  2:161366/140‑1 (MQ=255)                                                           tGCAGCGGGTTAATTTCCGCGAATTATGCAGCCTTCATTCAGGCATTGTGTTGCCGGGCGCGCTGCCGGTTTTATTGGTCAAATGGCGCTTCGTGTTTAAGAACTTTATCGATCACATCCAGTACGCCTTCACGGTTAtt                                                       >  2:32420/1‑140 (MQ=255)                                                                                                   aGGCATTGTGTTGCCGGGCGCGCTGCCGGTTTTATTGGTCAAATGGCGCTTCGTGTTTAAGAACTTTATCGATCACATCCAGTACGCCTTCACGGTTATTGGAGCCTGCGCGGTATTTTGCCGCTGCGACGACCGCGCTa               <  1:32420/140‑1 (MQ=255)                                                                                                    ggCATTGTGTTGCCGGGCGCGCTGCCGGTTTTATTGGTCAAATGGCGCTTCGTGTTTAAGAACTTTATCGATCACATCCAGTACGCCTTCACGGTTATTGGAGCCTGCGCGGTATTTTGCCGCTGCGACGACCGCGCTAc              <  1:268536/140‑1 (MQ=255)                                                                                                         tgtgTTGCCGGGCGCGCTGCCGGTTTTATTGGTCAAATGGCGCTTCGTGTTTAAGAACTTTATCGATCACATCCAGTACGCCTTCACGGTTATTGGAGCCTGCGCGGTATTTTGCCGCTGCGACGACCGCGCTACCGGCa         >  1:278678/1‑140 (MQ=255)                                                                                                                ccGGGCGCGCTGCCGGTTTTATTGGTCAAATGGCGCTTCGTGTTTAAGAACTTTATCGATCACATCCAGTACGCCTTCACGGTTATTGGAGCCTGCGCGGTATTTTGCCGCTGCGACGACCGCGCTACCGGCATTTTCCa  >  2:76282/1‑140 (MQ=255)                                                                                                                       |                                                                                                                                     CCCATTAAAAGCGCGCCCAACAGTAGACAATTTTTCATAATCATTTCGCCTGAAATAATGCAGCGGGTTAATTTCCGCGAATTATGCAGCCTTCATTCAGGCATTGTGTTGCCGGGCGTGCTGCCGGTTTTATTGGTCAAATGGCGCTTCGTGTTTAAGAACTTTATCGATCACATCCAGTACGCCTTCACGGTTATTGGAGCCTGCGCGGTATTTTGCCGCTGCGACGACCGCGCTACCGGCATTTTCCA  >  NC_000913/885187‑885437

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑