Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,861,001 T→C N111S (AAC→AGC)  ydjL ← putative zinc‑binding dehydrogenase YdjL

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,861,0010TC100.0% 76.1 / NA 22N111S (AAC→AGC) ydjLputative zinc‑binding dehydrogenase YdjL
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (12/10);  total (12/10)

CAAGTACGGCTGCGTCCTCATAATCAACACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGTTTACTTTTTCTGTACAACACAGAAAATCACCTTGTTCACAGGCCGGACAAACACCGCAAACGTGACCGCTGTTATCCGATACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATAC  >  NC_000913/1860864‑1861136
                                                                                                                                         |                                                                                                                                       
cAAGTACGGCTGCGTCCTCATAATCAACACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGctt                                                                                                                                       >  1:9309/1‑140 (MQ=255)
            cGTCCTCATAATCAACACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGCTTACTTTTTCTGTa                                                                                                                           >  1:25787/1‑140 (MQ=255)
            cGTCCTCATAATCAACACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGCTTACTTTTTCTGTa                                                                                                                           <  2:25787/140‑1 (MQ=255)
            cGTCCTCATAATCAACACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGCTTACTTTTTCTGTa                                                                                                                           <  2:141196/140‑1 (MQ=255)
             gTCCTCATAATCAACACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGCTTACTTTTTCTGTac                                                                                                                          >  2:128913/1‑140 (MQ=255)
                  cATAATCAACACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGCTTACTTTTTCTGTACAacac                                                                                                                     <  2:9309/140‑1 (MQ=255)
                        cAACACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGCTTACTTTTTCTGTACAACACAGaaaa                                                                                                               >  1:311012/1‑140 (MQ=255)
                           cacCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGCTTACTTTTTCTGTACAACACAGAAAATCa                                                                                                            >  1:253518/1‑140 (MQ=255)
                           cacCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGCTTACTTTTTCTGTACAACACAGAAAATCa                                                                                                            >  2:13403/1‑140 (MQ=255)
                                          cccACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGCTTACTTTTTCTGTACAACACAGAAAATCACCTTGTTca                                                                                                   <  1:132381/134‑1 (MQ=255)
                                          cccACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGCTTACTTTTTCTGTACAACACAGAAAATCACCTTGTTca                                                                                                   >  2:132381/1‑134 (MQ=255)
                                                               ttttGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACAACCGCCCCAGGTATTATTATCCAGACCAAGGCTTACTTTTTCTGTACAACACAGAAAATCACCTTGTTCACAGGCCGGACAAACACCGCAAACGTGa                                                                        <  2:368227/140‑1 (MQ=255)
                                                                     gaATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGCTTACTTTTTCTGTACAACACAGAAAATCACCTTGTTCACAGGCCGGACAAACACCGCAAACGTGACCGCTg                                                                  <  1:128913/140‑1 (MQ=255)
                                                                                           atatTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGCTTACTTTTTCTGTACAACACAGAAAATCACCTTGTTCACAGGCCGGACAAACACCGCAAACGTGACCGCTGTTATCCGATACGACGCGTTGcc                                            <  2:311012/140‑1 (MQ=255)
                                                                                                 ggAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGCTTACTTTTTCTGTACAACACAGAAAATCACCTTGTTCACAGGCCGGACAAACACCGCAAACGTGACCGCTGTTATCCGATACGACGCGTTGCCCCACtt                                      >  2:96081/1‑140 (MQ=255)
                                                                                                    aaaaCCACCGCCCCAGGTATTATTATCCAGACCAAGGCTTACTTTTTCTGTACAACACAGAAAATCACCTTGTTCACAGGCCGGACAAACACCGCAAACGTGACCGCTGTTATCCGATACGACGCGTTg                                              >  1:319905/1‑129 (MQ=255)
                                                                                                    aaaaCCACCGCCCCAGGTATTATTATCCAGACCAAGGCTTACTTTTTCTGTACAACACAGAAAATCACCTTGTTCACAGGCCGGACAAACACCGCAAACGTGACCGCTGTTATCCGATACGACGCGTTg                                              <  2:319905/129‑1 (MQ=255)
                                                                                                                ccAGGTATTATTATCCAGACCAAGGCTTACTTTTTCTGTACAACACAGAAAATCACCTTGTTCACAGGCCGGACAAACACCGCAAACGTGACCGCTGTTATCCGATACGACGCGTTGCCCCACTTTCCAGTCTTTGACtt                       <  1:277196/140‑1 (MQ=255)
                                                                                                                             tCCAGACCAAGGCTTACTTTTTCTGTACAACACAGAAAATCACCTTGTTCACAGGCCGGACAAACACCGCAAACGTGACCGCTGTTATCCGATACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTg          >  2:288333/1‑140 (MQ=255)
                                                                                                                              ccAGACCAAGGCTTACTTTTTCTGTACAACACAGAAAATCACCTTGTTCACAGGCCGGACAAACACCGCAAACGTGACCGCTGTTATCCGATACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTgc         >  2:211868/1‑140 (MQ=255)
                                                                                                                              ccAGACCAAGGCTTACTTTTTCTGTACAACACAGAAAATCACCTTGTTCACAGGCCGGACAAACACCGCAAACGTGACCGCTGTTATCCGATACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTgc         >  2:28309/1‑140 (MQ=255)
                                                                                                                                  aCCAAGGCTTACTTTTTCTGTACAACACAGAAAATCACCTTGTTCACAGGCCGGACAAACACCGCAAACGTGACCGCTGTTATCCGATACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCaa     >  1:75976/1‑140 (MQ=255)
                                                                                                                                     aaGGCTTACTTTTTCTGTACAACACAGAAAATCACCTTGTTCACAGGCCGGACAAACACCGCAAACGTGACCGCTGTTATCCGATACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATAc  <  2:274785/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                       
CAAGTACGGCTGCGTCCTCATAATCAACACCATCAGGGATTTCCCACAACGCATGACGATGAATTTTGAGAATTTCACCAGGAACCAGACAATATTTGGAAAAACCACCGCCCCAGGTATTATTATCCAGACCAAGGTTTACTTTTTCTGTACAACACAGAAAATCACCTTGTTCACAGGCCGGACAAACACCGCAAACGTGACCGCTGTTATCCGATACGACGCGTTGCCCCACTTTCCAGTCTTTGACTTTTTCACCAACCTGCGCAATAC  >  NC_000913/1860864‑1861136

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: