Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,880,907 (A)5→4 coding (903/924 nt) dmlR ← DNA‑binding transcriptional regulator DmlR

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,880,9030A.100.0% 182.2 / NA 43coding (907/924 nt)dmlRDNA‑binding transcriptional regulator DmlR
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base . (22/21);  total (22/21)

CTTTAATTATCTTTCGATCATGCGCGATTAAAGGTGAATATGCTAACCAATCTGTAGCGGCTTAGAAAGGAGAAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTGAAAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCCTTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCAC  >  NC_000913/1880768‑1881038
                                                                                                                                       |                                                                                                                                       
ctTTAATTATCTTTCGATCATGCGCGATTAAAGGTGAATATGCTAACCAATCTGTAGCGGCTTAGAAAGGAGAAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTGaaaat                                                                                                                                     >  2:95706/1‑139 (MQ=255)
ctTTAATTATCTTTCGATCATGCGCGATTAAAGGTGAATATGCTAACCAATCTGTAGCGGCTTAGAAAGGAGAAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTGaaaat                                                                                                                                     <  1:365110/140‑2 (MQ=255)
     aTTATCTTTCGATCATGCGCGATTAAAGGTGAATATGCTAACCAATCTGTAGCGGCTTAGAAAGGAGAAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCggg                                                                                                                               <  1:314399/140‑1 (MQ=255)
       tATCTTTCGATCATGCGCGATTAAAGGTGAATATGCTAACCAATCTGTAGCGGCTTAGAAAGGAGAAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTa                                                                                                                             <  2:547145/140‑1 (MQ=255)
       tATCTTTCGATCATGCGCGATTAAAGGTGAATATGCTAACCAATCTGTAGCGGCTTAGAAAGGAGAAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTa                                                                                                                             <  2:507326/140‑1 (MQ=255)
            ttCGATCATGCGCGATTAAAGGTGAATATGCTAACCAATCTGTAGCGGCTTAGAAAGGAGAAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCt                                                                                                                        <  1:271101/140‑1 (MQ=255)
            ttCGATCATGCGCGATTAAAGGTGAATATGCTAACCAATCTGTAGCGGCTTAGAAAGGAGAAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCt                                                                                                                        <  1:81908/140‑1 (MQ=255)
                aTCATGCGCGATTAAAGGTGAATATGCTAACCAATCTGTAGCGGCTTAGAAAGGAGAAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGc                                                                                                                    >  1:231229/1‑140 (MQ=255)
                aTCATGCGCGATTAAAGGTGAATATGCTAACCAATCTGTAGCGGCTTAGAAAGGAGAAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGc                                                                                                                    >  2:314749/1‑140 (MQ=255)
                      cgcgATTAAAGGTGAATATGCTAACCAATCTGTAGCGGCTTAGAAAGGAGAAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATa                                                                                                              >  2:93713/1‑140 (MQ=255)
                      cgcgATTAAAGGTGAATATGCTAACCAATCTGTAGCGGCTTAGAAAGGAGAAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATa                                                                                                              >  2:700081/1‑140 (MQ=255)
                                    aaTATGCTAACCAATCTGTAGCGGCTTAGAAAGGAGAAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAAtt                                                                                                >  2:615102/1‑140 (MQ=255)
                                     atatGCTAACCAATCTGTAGCGGCTTAGAAAGGAGAAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTc                                                                                               >  1:180278/1‑140 (MQ=255)
                                     atatGCTAACCAATCTGTAGCGGCTTAGAAAGGAGAAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTc                                                                                               >  1:273752/1‑140 (MQ=255)
                                         gCTAACCAATCTGTAGCGGCTTAGAAAGGAGAAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTAcc                                                                                           <  1:93713/140‑1 (MQ=255)
                                                  tCTGTAGCGGCTTAGAAAGGAGAAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGc                                                                                  >  1:141047/1‑140 (MQ=255)
                                                   cTGTAGCGGCTTAGAAAGGAGAAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCa                                                                                 <  1:286626/140‑1 (MQ=255)
                                                      tAGCGGCTTAGAAAGGAGAAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACtt                                                                              >  2:116053/1‑140 (MQ=255)
                                                       aGCGGCTTAGAAAGGAGAAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACttt                                                                             >  1:622485/1‑140 (MQ=255)
                                                           gCTTAGAAAGGAGAAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCt                                                                         >  1:454763/1‑140 (MQ=255)
                                                            cTTAGAAAGGAGAAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTg                                                                        >  1:562322/1‑140 (MQ=255)
                                                            cTTAGAAAGGAGAAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTg                                                                        >  1:805746/1‑140 (MQ=255)
                                                                   aGGAGAAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGc                                                                 <  2:141047/140‑1 (MQ=255)
                                                                      agaAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAg                                                              >  1:151992/1‑140 (MQ=255)
                                                                      agaAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAg                                                              >  1:411945/1‑140 (MQ=255)
                                                                      agaAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAg                                                              >  2:112609/1‑140 (MQ=255)
                                                                        aaaaTCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGcc                                                            <  2:93052/140‑1 (MQ=255)
                                                                           aTCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCCTTg                                                         <  1:116053/140‑1 (MQ=255)
                                                                                    tAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCCTTGAAACATaaa                                                <  2:180278/140‑1 (MQ=255)
                                                                                    tAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCCTTGAAACATaaa                                                <  1:615102/140‑1 (MQ=255)
                                                                                    tAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCCTTGAAACATaaa                                                <  1:700081/140‑1 (MQ=255)
                                                                                          gATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCCTTGAAACATAAACGGccc                                          >  1:21601/1‑140 (MQ=255)
                                                                                                 aCCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCCTTGAAACATAAACGGCCCAGACGtt                                   <  2:454763/140‑1 (MQ=255)
                                                                                                 aCCCGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCCTTGAAACATAAACGGCCCAGACGtt                                   >  1:36752/1‑140 (MQ=255)
                                                                                                   ccGATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCCTTGAAACATAAACGGCCCAGACGTTCg                                 <  1:50870/140‑1 (MQ=255)
                                                                                                     gATAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCCTTGAAACATAAACGGCCCAGACGTTCgct                               >  1:523463/1‑140 (MQ=255)
                                                                                                      aTAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCCTTGAAACATAAACGGCCCAGACGTTCgctg                              <  2:231229/140‑1 (MQ=255)
                                                                                                       tAATTGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCCTTGAAACATAAACGGCCCAGACGTTCgctgg                             <  2:805746/140‑1 (MQ=255)
                                                                                                          ttGAATCATTAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCCTTGAAACATAAACGGCCCAGACGTTCgctggctg                          >  2:434650/1‑140 (MQ=255)
                                                                                                                   tAATCAGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCCTTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTc                 <  2:622485/140‑1 (MQ=255)
                                                                                                                        aGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCCTTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTa            >  2:461442/1‑140 (MQ=255)
                                                                                                                        aGGCATGCTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCCTTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTa            <  1:552313/140‑1 (MQ=255)
                                                                                                                               cTCCAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCCTTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTg     >  1:364293/1‑140 (MQ=255)
                                                                                                                                 ccAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCCTTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCa   <  2:36752/140‑1 (MQ=255)
                                                                                                                                  cAGTG‑AAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCCTTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCAc  <  2:523463/140‑1 (MQ=255)
                                                                                                                                       |                                                                                                                                       
CTTTAATTATCTTTCGATCATGCGCGATTAAAGGTGAATATGCTAACCAATCTGTAGCGGCTTAGAAAGGAGAAAATCAGGTTTTAACCTGATATCAACCCGATAATTGAATCATTAATCAGGCATGCTCCAGTGAAAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCCTTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCAC  >  NC_000913/1880768‑1881038

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑