Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,403,047	A→G	N337S (AAC→AGC)	hflK →	regulator of FtsH protease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,403,047	0	A	G	100.0%	232.2 / NA	64	N337S (AAC→AGC)	hflK	regulator of FtsH protease
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (41/23);  total (41/23)

TACAAGGCCCAGACCATCCTGGAAGCTCAGGGTGAAGTGGCGCGCTTTGCTAAACTTCTGCCGGAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAACACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCC  >  NC_000913/4402914‑4403183                                                                                                                                      |                                                                                                                                         tACAAGGCCCAGACCATCCTGGAAGCTCAGGGTGAAGTGGCGCGCTTTGCTAAACTTCTGCCGGAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCg                                                                                                                                    <  1:133533/140‑1 (MQ=255)        cccAGACCATCCTGGAAGCTCAGGGTGAAGTGGCGCGCTTTGCTAAACTTCTGCCGGAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCa                                                                                                                                  <  2:267607/135‑1 (MQ=255)        cccAGACCATCCTGGAAGCTCAGGGTGAAGTGGCGCGCTTTGCTAAACTTCTGCCGGAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCa                                                                                                                                  >  1:267607/1‑135 (MQ=255)        cccAGACCATCCTGGAAGCTCAGGGTGAAGTGGCGCGCTTTGCTAAACTTCTGCCGGAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTg                                                                                                                             >  1:723629/1‑140 (MQ=255)            gACCATCCTGGAAGCTCAGGGTGAAGTGGCGCGCTTTGCTAAACTTCTGCCGGAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTgg                                                                                                                         >  1:327125/1‑140 (MQ=255)             aCCATCCTGGAAGCTCAGGGTGAAGTGGCGCGCTTTGCTAAACTTCTGCCGGAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGt                                                                                                                        <  2:406871/140‑1 (MQ=255)             aCCATCCTGGAAGCTCAGGGTGAAGTGGCGCGCTTTGCTAAACTTCTGCCGGAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGt                                                                                                                        >  1:548440/1‑140 (MQ=255)                 tCCTGGAAGCTCAGGGTGAAGTGGCGCGCTTTGCTAAACTTCTGCCGGAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAAc                                                                                                                    >  2:756540/1‑140 (MQ=255)                         gCTCAGGGTGAAGTGGCGCGCTTTGCTAAACTTCTGCCGGAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAgg                                                                                                            >  2:300198/1‑140 (MQ=255)                           tCAGGGTGAAGTGGCGCGCTTTGCTAAACTTCTGCCGGAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTg                                                                                                          >  2:685945/1‑140 (MQ=255)                           tCAGGGTGAAGTGGCGCGCTTTGCTAAACTTCTGCCGGAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTg                                                                                                          >  2:549786/1‑140 (MQ=255)                            cAGGGTGAAGTGGCGCGCTTTGCTAAACTTCTGCCGGAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTgg                                                                                                         <  2:327125/140‑1 (MQ=255)                             aGGGTGAAGTGGCGCGCTTTGCTAAACTTCTGCCGGAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGc                                                                                                        <  1:576539/140‑1 (MQ=255)                               ggTGAAGTGGCGCGCTTTGCTAAACTTCTGCCGGAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCaa                                                                                                      <  2:545136/140‑1 (MQ=255)                                    aGTGGCGCGCTTTGCTAAACTTCTGCCGGAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGa                                                                                                 >  2:158598/1‑140 (MQ=255)                                           cgcTTTGCTAAACTTCTGCCGGAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCt                                                                                          <  2:723629/140‑1 (MQ=255)                                               ttGCTAAACTTCTGCCGGAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCg                                                                                      <  1:756540/140‑1 (MQ=255)                                               ttGCTAAACTTCTGCCGGAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCg                                                                                      <  1:685945/140‑1 (MQ=255)                                                  cTAAACTTCTGCCGGAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTa                                                                                   >  1:262147/1‑140 (MQ=255)                                                     aaCTTCTGCCGGAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGAc                                                                                <  1:593875/140‑1 (MQ=255)                                                      aCTTCTGCCGGAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGAcc                                                                               <  2:593368/140‑1 (MQ=255)                                                         tCTGCCGGAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGa                                                                            <  2:244458/140‑1 (MQ=255)                                                          cTGCCGGAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGAt                                                                           >  1:234239/1‑140 (MQ=255)                                                                gAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGaa                                                                     <  2:224910/140‑1 (MQ=255)                                                                    ataAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAggt                                                                 <  1:158598/140‑1 (MQ=255)                                                                       aaGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAggtggt                                                              >  1:473819/1‑140 (MQ=255)                                                                       aaGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAggtggt                                                              <  2:421527/140‑1 (MQ=255)                                                                           cgcgCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACg                                                          >  1:5157/1‑140 (MQ=255)                                                                             cgcCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAg                                                                   <  1:198512/129‑1 (MQ=255)                                                                             cgcCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAg                                                                   >  2:198512/1‑129 (MQ=255)                                                                             cgcCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGcc                                                        >  2:616785/1‑140 (MQ=255)                                                                             cgcCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGcc                                                        >  1:762231/1‑140 (MQ=255)                                                                             cgcCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGcc                                                        >  2:374415/1‑140 (MQ=255)                                                                                      ttACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTgcggcg                                               <  1:69816/140‑1 (MQ=255)                                                                                       tACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGa                                              >  1:736043/1‑140 (MQ=255)                                                                                             cgAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTgcggcg                                               >  1:612314/1‑133 (MQ=255)                                                                                             cgAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTgcggcg                                               <  2:612314/133‑1 (MQ=255)                                                                                                    cTGTATATCGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACgg                                 <  2:262147/140‑1 (MQ=255)                                                                                                            cGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCa                         >  2:344008/1‑140 (MQ=255)                                                                                                            cGAGACGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCa                         >  2:300615/1‑140 (MQ=255)                                                                                                              agaCGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAAt                       >  2:124321/1‑140 (MQ=255)                                                                                                              agaCGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAAt                       >  2:620416/1‑140 (MQ=255)                                                                                                              agaCGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAAt                       >  2:692859/1‑140 (MQ=255)                                                                                                              agaCGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAAt                       >  1:200809/1‑140 (MQ=255)                                                                                                              agaCGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAAt                       >  1:524952/1‑140 (MQ=255)                                                                                                              agaCGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAAt                       >  1:634054/1‑140 (MQ=255)                                                                                                               gaCGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATc                      >  1:692401/1‑140 (MQ=255)                                                                                                                 cGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATctg                    >  2:274356/1‑140 (MQ=255)                                                                                                                 cGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATctg                    >  1:769027/1‑140 (MQ=255)                                                                                                                 cGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATctg                    >  1:778898/1‑140 (MQ=255)                                                                                                                 cGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATctg                    >  2:394231/1‑140 (MQ=255)                                                                                                                 cGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATctg                    >  1:111613/1‑140 (MQ=255)                                                                                                                 cGATGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATctg                    >  2:206789/1‑140 (MQ=255)                                                                                                                   aTGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATctgct                  >  2:797362/1‑140 (MQ=255)                                                                                                                    tGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATctgctg                 >  2:383929/1‑140 (MQ=255)                                                                                                                    tGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATctgctg                 >  1:617046/1‑140 (MQ=255)                                                                                                                    tGGAAAAAGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATctgctg                 >  1:565525/1‑140 (MQ=255)                                                                                                                        aaaaGTGTTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTc             <  1:374415/140‑1 (MQ=255)                                                                                                                              gtTGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTgccgc       >  2:279349/1‑140 (MQ=255)                                                                                                                                tGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCCGCCa     <  2:398472/140‑1 (MQ=255)                                                                                                                                tGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCCGCCa     >  1:398472/1‑140 (MQ=255)                                                                                                                                tGGGTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCCGCCa     >  1:216441/1‑140 (MQ=255)                                                                                                                                   gTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGcc  <  1:344008/140‑1 (MQ=255)                                                                                                                                   gTAGCACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGcc  <  2:769027/140‑1 (MQ=255)                                                                                                                                      |                                                                                                                                         TACAAGGCCCAGACCATCCTGGAAGCTCAGGGTGAAGTGGCGCGCTTTGCTAAACTTCTGCCGGAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAACACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCC  >  NC_000913/4402914‑4403183

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑