| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,963,709 | A→G | V3A (GTA→GCA) *157Q (TAA→CAA) |
ppdB ← ppdA ← |
conserved protein PpdB conserved protein PpdA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,963,709 | 0 | A | G | 100.0% | 99.4 / NA | 27 | V3A (GTA→GCA) *157Q (TAA→CAA) | ppdB ppdA | conserved protein PpdB conserved protein PpdA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (14/13); total (14/13) | |||||||||||
CTCGTTAAACTTTCACGCTGTAACGCAGGCAGAAAGCGTGCCGCCCCCAGCAACAATACGCTACTGATCGCCATAGCAATCAACACTTCCAGCAGAGAAAAACCTTGCTCTTTTACAGGCATCCTTCTGTTTCTCCTTGCTGACAAAGCCGGAGTCTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGCCCGGCCCATGCGGTATTGCGCAGGCCAAAG > NC_000913/2963595‑2963839 | cTCGTTAAACTTTCACGCTGTAACGCAGGCAGAAAGCGTGCCGCCCCCAGCAACAATACGCTACTGATCGCCATAGCAATCAACACTTCCAGCAGAGAAAAACCTTGCTCTTTTGCAGGCATCCTTCTGTTTCTCCtgct > 2:54916/1‑137 (MQ=255)cTCGTTAAACTTTCACGCTGTAACGCAGGCAGAAAGCGTGCCGCCCCCAGCAACAATACGCTACTGATCGCCATAGCAATCAACACTTCCAGCAGAGAAAAACCTTGCTCTTTTGCAGGCATCCTTCTGTTTCTCCTTGc > 2:268245/1‑140 (MQ=255)cTCGTTAAACTTTCACGCTGTAACGCAGGCAGAAAGCGTGCCGCCCCCAGCAACAATACGCTACTGATCGCCATAGCAATCAACACTTCCAGCAGAGAAAAACCTTGCTCTTTTGCAGGCATCCTTCTGTTTCTCCTTGc > 1:78742/1‑140 (MQ=255) ttCACGCTGTAACGCAGGCAGAAAGCGTGCCGCCCCCAGCAACAATACGCTACTGATCACCATAGCAATCAACACTTCCAGCAGAGAAAAACCTTGCTCTTTTGCAGGCATCCTTCTGTTTCTCCTTGCTGACAAAGCCg < 1:124133/140‑1 (MQ=255) cGTGCCGCCCCCAGCAACAATACGCTACTGATCGCCATAGCAATCAACACTTCCAGCAGAGAAAAACCTTGCTCTTTTGCAGGCATCCTTCTGTTTCTCCTTGCTGACAAAGCCGGAGTCTTCCCCACGGCGAAaccacc < 1:268245/140‑1 (MQ=255) ccAGCAACAATACGCTACTGATCGCCATAGCAATCAACACTTCCAGCAGAGAAAAACCTTGCTCTTTTGCAGGCATCCTTCTGTTTCTCCTTGCTGACAAAGCCGGAGTCTTCCCCACGGCGAAACCACCAGCCACCACt < 2:78742/140‑1 (MQ=255) tACGCTACTGATCGCCATAGCAATCAACACTTCCAGCAGAGAAAAACCTTGCTCTTTTGCAGGCATCCTTCTGTTTCTCCTTGCTGACAAAGCCGGAGTCTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGa > 1:34657/1‑140 (MQ=255) tGATCGCCATAGCAATCAACACTTCCAGCAGAGAAAAACCTTGCTCTTTTGCAGGCATCCTTCTGTTTCTCCTTGCTGACAAAGCCGGAGTCTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTg > 2:72395/1‑131 (MQ=255) tGATCGCCATAGCAATCAACACTTCCAGCAGAGAAAAACCTTGCTCTTTTGCAGGCATCCTTCTGTTTCTCCTTGCTGACAAAGCCGGAGTCTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTg < 1:72395/131‑1 (MQ=255) aTCGCCATAGCAATCAACACTTCCAGCAGAGAAAAACCTTGCTCTTTTGCAGGCATCCTTCTGTTTCTCCTTGCTGACAAAGCCGGAGTCTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAg > 1:283795/1‑140 (MQ=255) aTCGCCATAGCAATCAACACTTCCAGCAGAGAAAAACCTTGCTCTTTTGCAGGCATCCTTCTGTTTCTCCTTGCTGACAAAGCCGGAGTCTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAg > 1:315208/1‑140 (MQ=255) aTCGCCATAGCAATCAACACTTCCAGCAGAGAAAAACCTTGCTCTTTTGCAGGCATCCTTCTGTTTCTCCTTACTGACAAAGCCGGAGTCTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAg > 1:260022/1‑140 (MQ=255) cGCCATAGCAATCAACACTTCCAGCAGAGAAAAACCTTGCTCTTTTGCAGGCATCCTTCTGTTTCTCCTTGCTGACAAAGCCGGAGTCTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCg > 1:289065/1‑140 (MQ=255) cATAGCAATCAACACTTCCAGCAGAGAAAAACCTTGCTCTTTTGCAGGCATCCTTCTGTTTCTCCTTGCTGACAAAGCCGGAGTCTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAat > 2:110387/1‑140 (MQ=255) tAGCAATCAACACTTCCAGCAGAGAAAAACCTTGCTCTTTTGCAGGCATCCTTCTGTTTCTCCTTGCTGACAAAGCCGGAGTCTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAatat > 1:230637/1‑140 (MQ=255) aaTCAACACTTCCAGCAGAGAAAAACCTTGCTCTTTTGCAGGCATCCTTCTGTTTCTCCTTGCTGACAAAGCCGGAGTCTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGccc < 1:110387/140‑1 (MQ=255) tCAACACTTCCAGCAGAGAAAAACCTTGCTCTTTTGCAGGCATCCTTCTGTTTCTCC‑TGCTGACAAAGCCGGAGTCTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGCCCGGc < 1:54916/140‑1 (MQ=255) cAACACTTCCAGCAGAGAAAAACCTTGCTCTTTTGCAGGCATCCTTCTGTTTCTCCTTACTGACAAAGCCGGAGTCTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGACCGGc < 2:260022/140‑1 (MQ=255) aaCACTTCCAGCAGAGAAAAACCTTGCTCTTTTGCAGGCATCCTTCTGTTTCTCCTTGCTGACAAAGCCGGAGTCTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGcc > 2:31109/1‑135 (MQ=255) aaCACTTCCAGCAGAGAAAAACCTTGCTCTTTTGCAGGCATCCTTCTGTTTCTCCTTGCTGACAAAGCCGGAGTCTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGcc < 1:31109/135‑1 (MQ=255) cTTCCAGCAGAGAAAAACCTTGCTCTTTTGCAGGCATCCTTCTGTTTCTCCTTGCTGACAAAGCCGGAGTCTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGCCCGGCCCATg < 2:230637/140‑1 (MQ=255) cTTCCAGCAGAGAAAAACCTTGCTCTTTTGCAGGCATCCTTCTGTTTCTCCTTGCTGACAAAGCCGGAGTCTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGCCCGGCCCATg < 2:283795/140‑1 (MQ=255) cTTCCAGCAGAGAAAAACCTTGCTCTTTTGCAGGCATCCTTCTGTTTCTCCTTGCTGACAAAGCCGGAGTCTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGCCCGGCCCATg < 2:315208/140‑1 (MQ=255) agaAAAACCTTGCTCTTTTGCAGGCATCCTTCTGTTTCTCCTTGCTGACAAAGCCGGAGTCTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGCCCGGCCCATGCGGTATTgcg < 2:34657/140‑1 (MQ=255) agaAAAACCTTGCTCTTTTGCAGGCATCCTTCTGTTTCTCCTTGCTGACAAAGCCGGAGTCTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGCCCGGCCCATGCGGTATTgcg < 1:197641/140‑1 (MQ=255) aaaaaCCTTGCTCTTTTGCAGGCATCCTTCTGTTTCTCCTTGCTGACAAAGCCGGAGTCTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGCCCGGCCCATGCGGTATTGCGCa > 2:253668/1‑140 (MQ=255) tGCTCTTTTGCAGGCATCCTTCTGTTTCTCCTTGCTGACAAAGCCGGAGTCTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGCCCGGCCCATGCGGTATTGCGCAGGCCaaag > 1:293185/1‑140 (MQ=255) | CTCGTTAAACTTTCACGCTGTAACGCAGGCAGAAAGCGTGCCGCCCCCAGCAACAATACGCTACTGATCGCCATAGCAATCAACACTTCCAGCAGAGAAAAACCTTGCTCTTTTACAGGCATCCTTCTGTTTCTCCTTGCTGACAAAGCCGGAGTCTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGCCCGGCCCATGCGGTATTGCGCAGGCCAAAG > NC_000913/2963595‑2963839 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |