Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 339,723 T→C C467R (TGC→CGC)  yahG → DUF1116 domain‑containing protein YahG

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913339,7230TC100.0% 48.2 / NA 14C467R (TGC→CGC) yahGDUF1116 domain‑containing protein YahG
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (7/7);  total (7/7)

CCGCGTGGGTAGCAGCGGCATTCTGCCGGTGATCAACACCGCCATCGCCCATAAAGATGCGGGCGTCGGCATGATTGGCGCGGGCATTGTGCATCCACCTTTTGCCTGCTTCGAGAAAGCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTG  >  NC_000913/339590‑339850
                                                                                                                                     |                                                                                                                               
ccGCGTGGGTAGCAGCGGCATTCTGCCGGTGATCAACACCGCCATCGCCCATAAAGATGCGGGCGTCGGCATGATTGGCGCGGGCATTGTGCATCCACCTTTTGCCTGCTTCGAGAAAGCCATTCTTGGCTGGCGCGAAc                                                                                                                           >  1:217798/1‑140 (MQ=255)
                   aTTCTGCCGGTGATCAACACCGCCATCGCCCATAAAGATGCGGGCGTCGGCATGATTGGCGCGGGCATTGTGCATCCACCTTTTGCCTGCTTCGAGAAAGCCATTCTTGGCTGGCGCGAACGTTACGGCGTCTGACCTAc                                                                                                        <  2:119449/140‑1 (MQ=255)
                   aTTCTGCCGGTGATCAACACCGCCATCGCCCATAAAGATGCGGGCGTCGGCATGATTGGCGCGGGCATTGTGCATCCACCTTTTGCCTGCTTCGAGAAAGCCATTCTTGGCTGGCGCGAACGTTACGGCGTCTGACCTAc                                                                                                        <  2:7967/140‑1 (MQ=255)
                                     acCGCCATCGCCCATAAAGATGCGGGCGTCGGCATGATTGGCGCGGGCATTGTGCATCCACCTTTTGCCTGCTTCGAGAAAGCCATTCTTGGCTGGCGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATgcg                                                                                      <  2:145555/140‑1 (MQ=255)
                                         ccATCGCCCATAAAGATGCGGGCGTCGGCATGATTGGCGCGGGTATTGTGCATCCACCTTTTGCCTGCTTCGAGAAAGCCATTCTTGGCTGGCGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATgcgg                                                                                     >  1:363855/1‑137 (MQ=255)
                                         ccATCGCCCATAAAGATGCGGGCGTCGGCATGATTGGCGCGGGTATTGTGCATCCACCTTTTGCCTGCTTCGAGAAAGCCATTCTTGGCTGGCGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATgcgg                                                                                     <  2:363855/137‑1 (MQ=255)
                                          cATCGCCCATAAAGATGCGGGCGTCGGCATGATTGGCGCGGGCATTGTGCATCCACCTTTTGCCTGCTTCGAGAAAGCCATTCTTGGCTGGCGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTg                                                                                 >  2:7019/1‑140 (MQ=255)
                                                   tAAAGATGCGGGCGTCGGCATGATTGGCGCGGGCATTGTGCATCCACCTTTTGCCTGCTTCGAGAAAGCCATTCTTGGCTGGCGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTa                                                                        >  2:88056/1‑140 (MQ=255)
                                                          gCGGGCGTCGGCATGATTGGCGCGGGCATTGTGCATCCACCTTTTGCCTGCTTCGAGAAAGCCATTCTTGGCTGGCGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGcc                                                                 >  2:162942/1‑140 (MQ=255)
                                                                          ttGGCGCGGGCATTGTGCATCCACCTTTTGCCTGCTTCGAGAAAGCCATTCTTGGCTGGCGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGa                                                 <  1:402611/140‑1 (MQ=255)
                                                                               gcgGGCATTGTGCATCCACCTTTTGCCTGCTTCGAGAAAGCCATTCTTGGCTGGCGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTg                                            <  2:217798/140‑1 (MQ=255)
                                                                                 gggCATTGTGCATCCACCTTTTGCCTGCTTCGAGAAAGCCATTCTTGGCTGGCGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTa                                          <  1:88056/140‑1 (MQ=255)
                                                                                                        ccTGCTTCGAGAAAGCCATTCTTGGCTGGCGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCa                   >  2:55626/1‑140 (MQ=255)
                                                                                                                         aTTCTTGGCTGGCGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTg  >  1:34947/1‑140 (MQ=255)
                                                                                                                                     |                                                                                                                               
CCGCGTGGGTAGCAGCGGCATTCTGCCGGTGATCAACACCGCCATCGCCCATAAAGATGCGGGCGTCGGCATGATTGGCGCGGGCATTGTGCATCCACCTTTTGCCTGCTTCGAGAAAGCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTG  >  NC_000913/339590‑339850

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: