| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 145,411 | A→G | T111A (ACG→GCG) | yadE → | putative polysaccharide deacetylase lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 145,411 | 0 | A | G | 100.0% | 71.8 / NA | 20 | T111A (ACG→GCG) | yadE | putative polysaccharide deacetylase lipoprotein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (11/9); total (11/9) | |||||||||||
ATTTAATTTTGGCTTTGGCAAAGGTTTTATCGATAAAGGTCATCTCGAGCCGGTTCAGGGGCGACAAAAAGTTGAAGACGGTTTGGGCGACCTCAACAAGCCGCTGAGTAATCAGAACTTAGTTACCTGGAAAGATACGCCGGTCTATAACGCGCCGAGTGCGGGAAGTGCGCCATTTGGGGTACTGGCGGACAATTTGCGCTACCCGATTTTGCATAAACTGAAAGACAGGTTAAATCAAACCTGGTATCAGATCCGTATTGGCGATCGAC > NC_000913/145275‑145546 | aTTTAATTTTGGCTTTGGCAAAGGTTTTATCGATAAAGGTCATCTCGAGCCGGTTCAGGGGCGACAAAAAGTTGAAGACGGTTTGGGCGACCTCAACAAGCCGCTGAGTAATCAGAACTTAGTTACCTGGAAAGATgcgc < 2:318249/140‑1 (MQ=255) tttAATTTTGGCTTTGGCAAAGGTTTTATCGATAAAGGTCATCTCGAGCCGGTTCAGGGGCGACAAAAAGTTGAAGACGGTTTGGGCGACCTCAACAAGCCGCTGAGTAATCAGAACTTAGTTACCTGGAAAGATGCGcc > 2:346945/1‑140 (MQ=255) aaTTTTGGCTTTGGCAAAGGTTTTATCGATAAAGGTCATCTCGAGCCGGTTCAGGGGCGACAAAAAGTTGAAGACGGTTTGGGCGACCTCAACAAGCCGCTGAGTAATCAGAACTTAGTTACCTGGAAAGATGCGCCGGt > 1:306741/1‑140 (MQ=255) ggctttggcAAAGGTTTTATCGATAAAGGTCATCTCGAGCCGGTTCAGGGGCGACAAAAAGTTGAAGACGGTTTGGGCGACCTCAACAAGCCGCTGAGTAATCAGAACTTAGTTACCTGGAAAGATGCGCCGGTCTATaa > 2:243756/1‑140 (MQ=255) tggcAAAGGTTTTATCGATAAAGGTCATCTCGAGCCGGTTCAGGGGCGACAAAAAGTTGAAGACGGTTTGGGCGACCTCAACAAGCCGCTGAGTAATCAGAACTTAGTTACCTGGAAAGATGCGCCGGTCTATAACgcgc < 1:403529/140‑1 (MQ=255) gggcAAAGGTTTTATCGATAAAGGTCATCTCGAGCCGGTTCAGGGGCGACAAAAAGTTGAAGACGGTTTGGGCGACCTCAACAAGCCGCTGAGTAATCAGAACTTAGTTACCTGGAAAGATGCGCCGGTCTATAACgcgc < 2:119195/139‑1 (MQ=255) ggcAAAGGTTTTATCGATAAAGGTCATCTCGAGCCGGTTCAGGGGCGACAAAAAGTTGAAGACGGTTTGGGCGACCTCAACAAGCCGCTGAGTAATCAGAACTTAGTTACCTGGAAAGATgcgc > 1:43656/1‑124 (MQ=255) ggcAAAGGTTTTATCGATAAAGGTCATCTCGAGCCGGTTCAGGGGCGACAAAAAGTTGAAGACGGTTTGGGCGACCTCAACAAGCCGCTGAGTAATCAGAACTTAGTTACCTGGAAAGATgcgc < 2:43656/124‑1 (MQ=255) aTCTCGAGCCGGTTCAGGGGCGACAAAAAGTTGAAGACGGTTTGGGCGACCTCAACAAGCCGCTGAGTAATCAGAACTTAGTTACCTGGAAAGATGCGCCGGTCTATAACGCGCCGAGTGCGGGAAGTgcg < 1:167630/131‑1 (MQ=255) aTCTCGAGCCGGTTCAGGGGCGACAAAAAGTTGAAGACGGTTTGGGCGACCTCAACAAGCCGCTGAGTAATCAGAACTTAGTTACCTGGAAAGATGCGCCGGTCTATAACGCGCCGAGTGCGGGAAGTgcg > 2:167630/1‑131 (MQ=255) gggCGACAAAAAGTTGAAGACGGTTTGGGCGACCTCAACAAGCCGCTGAGTAATCAGAACTTAGTTACCTGGAAAGATGCGCCGGTCTATAACGCGCCGAGTGCGGGAAGTGCGCCATTTGGGGTACTGGCGGACAAttt > 2:299109/1‑140 (MQ=255) ttGGGCGACCTCAACAAGCCGCTGAGTAATCAGAACTTAGTTACCTGGAAAGATGCGCCGGTCTATAACGCGCCGAGTGCGGGAAGTGCGCCATTTGGGGTACTGGCGGACAATTTGCGCTACCCGATTTTGCATAAACt > 1:298046/1‑140 (MQ=255) cGACCTCAACAAGCCGCTGAGTAATCAGAACTTAGTTACCTGGAAAGATGCGCCGGTCTATAACGCGCCGAGTGCGGGAAGTGCGCCATTTGGGGTACTGGCGGACAATTTGCGCTACCCGATTTTGCATAAACTGAAAg > 2:327040/1‑140 (MQ=255) cTCAACAAGCCGCTGAGTAATCAGAACTTAGTTACCTGGAAAGATGCGCCGGTCTATAACGCGCCGAGTGCGGGAAGTGCGCCATTTGGGGTACTGGCGGACAATTTGCGCTACCCGATTTTGCATAAACTGAAAGACAg > 1:368758/1‑140 (MQ=255) cTCAACAAGCCGCTGAGTAATCAGAACTTAGTTACCTGGAAAGATGCGCCGGTCTATAACGCGCCGAGTGCGGGAAGTGCGCCATTTGGGGTACTGGCGGACAATTTGCGCTACCCGATTTTGCATAAACTGAAAGACAg > 1:377558/1‑140 (MQ=255) caacaaGCCGCTGAGTAATCAGAACTTAGTTACCTGGAAAGATGCGCCGGTCTATAACGCGCCGAGTGCGGGAAGTGCGCCATTTGGGGTACTGGCGGACAATTTGCGCTACCCGATTTTGCATAAACTGAAAGACAGGt < 2:377558/140‑1 (MQ=255) ccGCTGAGTAATCAGAACTTAGTTACCTGGAAAGATGCGCCGGTCTATAACGCGCCGAGTGCGGGAAGTGCGCCATTTGGGGTACTGGCGGACAATTTGCGCTACCCGATTTTGCATAAACTGAAAGACAGGTTAAATCa > 2:166872/1‑140 (MQ=255) ccGCTGAGTAATCAGAACTTAGTTACCTGGAAAGATGCGCCGGTCTATAACGCGCCGAGTGCGGGAAGTGCGCCATTTGGGGTACTGGCGGACAATTTGCGCTACCCGATTTTGCATAAACTGAAAGACAGGTTAAATCa < 1:327040/140‑1 (MQ=255) aTCAGAACTTAGTTACCTGGAAAGATGCGCCGGTCTATAACGCGCCGAGTGCGGGAAGTGCGCCATTTGGGGTACTGGCGGACAATTTGCGCTACCCGATTTTGCATAAACTGAAAGACAGGTTAAATCAAACCTGGTAt < 2:383025/140‑1 (MQ=255) tCAGAACTTAGTTACCTGGAAAGATGCGCCGGTCTATAACGCGCCGAGTGCGGGAAGTGCGCCATTTGGGGTACTGGCGGACAATTTGCGCTACCCGATTTTGCATAAACTGAAAGACAGGTTAAATCAAACCTGGTATc < 1:346945/140‑1 (MQ=255) ccTGGAAAGATGCGCCGGTCTATAACGCGCCGAGTGCGGGAAGTGCGCCATTTGGGGTACTGGCGGACAATTTGCGCTACCCGATTTTGCATAAACTGAAAGACAGGTTAAATCAAACCTGGTATCAGATCCGTATTGGc > 2:289554/1‑140 (MQ=255) aGATGCGCCGGTCTATAACGCGCCGAGTGCGGGAAGTGCGCCATTTGGGGTACTGGCGGACAATTTGCGCTACCCGATTTTGCATAAACTGAAAGACAGGTTAAATCAAACCTGGTATCAGATCCGTATTGGCGATCGAc < 2:306741/140‑1 (MQ=255) aGATGCGCCGGTCTATAACGCGCCGAGTGCGGGAAGTGCGCCATTTGGGGTACTGGCGGACAATTTGCGCTACCCGATTTTGCATAAACTGAAAGACAGGTTAAATCAAACCTGGTATCAGATCCGTATTGGCGATCGAc < 1:289554/140‑1 (MQ=255) | ATTTAATTTTGGCTTTGGCAAAGGTTTTATCGATAAAGGTCATCTCGAGCCGGTTCAGGGGCGACAAAAAGTTGAAGACGGTTTGGGCGACCTCAACAAGCCGCTGAGTAATCAGAACTTAGTTACCTGGAAAGATACGCCGGTCTATAACGCGCCGAGTGCGGGAAGTGCGCCATTTGGGGTACTGGCGGACAATTTGCGCTACCCGATTTTGCATAAACTGAAAGACAGGTTAAATCAAACCTGGTATCAGATCCGTATTGGCGATCGAC > NC_000913/145275‑145546 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |