| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 371,588 | (G)6→7 | coding (350/867 nt) | mhpC → | 2‑hydroxy‑6‑ketonona‑2,4‑dienedioate hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 371,582 | 1 | . | G | 98.5% | 230.2 / ‑3.4 | 65 | coding (344/867 nt) | mhpC | 2‑hydroxy‑6‑ketonona‑2,4‑dienedioate hydrolase |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base G (36/28); total (37/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.41e-01 | |||||||||||
ATCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGAT‑‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAAT > NC_000913/371443‑371715 | aTCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGAt > 2:559553/1‑140 (MQ=255)aTCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGAt > 1:275147/1‑140 (MQ=255) ctgctgGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGAT‑‑ggg > 1:999248/1‑140 (MQ=255) ctgctgGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCATTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGAT‑‑ggg < 2:246996/140‑1 (MQ=255) tgGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGAT‑‑gggg‑ggg < 1:517864/140‑2 (MQ=255) ttGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGAT‑‑gggg‑gggccat > 2:883745/1‑135 (MQ=255) ttGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGAT‑‑gggg‑gggccat > 1:474484/1‑135 (MQ=255) tCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGt > 1:1092973/1‑140 (MQ=255) gTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGAT‑‑gggg > 2:933025/1‑125 (MQ=255) gTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGAT‑‑gggg < 1:933025/125‑1 (MQ=255) ggCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGt < 2:312472/140‑1 (MQ=255) ggCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGt > 2:116403/1‑140 (MQ=255) gCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGtt < 1:151052/140‑1 (MQ=255) gCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGtt < 2:1092973/140‑1 (MQ=255) aTTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTaa > 1:1138749/1‑140 (MQ=255) aTTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTaa > 2:412647/1‑140 (MQ=255) tAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAg < 1:116403/140‑1 (MQ=255) aTAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAgcg < 2:208870/140‑1 (MQ=255) tGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTc > 1:532184/1‑140 (MQ=255) gTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCgg > 1:997135/1‑140 (MQ=255) gTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCgg > 1:1173096/1‑140 (MQ=255) cgcgATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCaa < 1:559553/140‑1 (MQ=255) gcgATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGTAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCaaa < 2:1138749/140‑1 (MQ=255) gcgATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCaaa < 2:532184/140‑1 (MQ=255) gATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGAT‑‑GGGGAGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACt > 1:838764/1‑140 (MQ=255) tCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTgg > 1:716362/1‑140 (MQ=255) aTGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAAc > 2:824185/1‑127 (MQ=255) aTGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAAc < 1:824185/127‑1 (MQ=255) aTGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATggg > 1:1073156/1‑140 (MQ=255) aTGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATggg < 1:883745/140‑1 (MQ=255) aCGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGggcggc > 2:549601/1‑140 (MQ=255) aCGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGggcggc > 2:345877/1‑140 (MQ=255) aCGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGggcggc < 2:999248/140‑1 (MQ=255) aCGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGggcggc > 1:726015/1‑140 (MQ=255) cGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGgcggcg > 2:641480/1‑140 (MQ=255) cGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGgcggcg > 2:930727/1‑140 (MQ=255) tCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTAc > 1:1157894/1‑140 (MQ=255) cTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACgg < 2:1073156/140‑1 (MQ=255) aaaaGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGggcg > 1:594951/1‑140 (MQ=255) aaaGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGggcgg < 1:549601/140‑1 (MQ=255) aaGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGggcggc < 2:997135/140‑1 (MQ=255) cGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGggcgg > 1:632497/1‑124 (MQ=255) cGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGggcgg < 2:632497/124‑1 (MQ=255) cGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGggcg < 2:1048257/135‑1 (MQ=255) cGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGggcg > 1:1048257/1‑135 (MQ=255) cGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATg > 2:317137/1‑140 (MQ=255) tggtggATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGa > 1:997715/1‑140 (MQ=255) ggtggATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAgt < 2:570124/140‑1 (MQ=255) ggtggATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAgt < 1:641480/140‑1 (MQ=255) tCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAgtttgttt > 2:1104168/1‑140 (MQ=255) cAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTa > 2:363200/1‑140 (MQ=255) atatCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGAt > 1:1170072/1‑140 (MQ=255) tatCGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATg > 2:152289/1‑140 (MQ=255) cGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAAGTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCa > 2:1067958/1‑140 (MQ=255) cGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAgt < 1:696913/122‑1 (MQ=255) cGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAgt > 2:696913/1‑122 (MQ=255) cGCCAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCa < 1:1104168/140‑1 (MQ=255) ccAAAATCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAAc > 1:1066001/1‑140 (MQ=255) aaaaTCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCg < 1:345877/140‑1 (MQ=255) aaaaTCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCg < 2:1170072/140‑1 (MQ=255) aaTCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGaa > 2:1037982/1‑140 (MQ=255) tCCACCTGCTGGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAgg < 1:1037982/140‑1 (MQ=255) tgctgGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTaa < 1:502278/140‑1 (MQ=255) gctgGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCg < 1:258082/129‑1 (MQ=255) gctgGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCg > 2:258082/1‑129 (MQ=255) ctgGGCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGc > 1:816950/1‑140 (MQ=255) gggCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCg < 2:405172/126‑1 (MQ=255) gggCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCg > 1:405172/1‑126 (MQ=255) gggCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGa < 1:1153404/140‑1 (MQ=255) gggCAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGa > 2:1202491/1‑140 (MQ=255) cAACTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTg > 1:1174767/1‑140 (MQ=255) cTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGAc > 2:929367/1‑135 (MQ=255) cTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGAc < 1:929367/135‑1 (MQ=255) cTCGATG‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAAt > 1:539163/1‑140 (MQ=255) | ATCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGAT‑‑GGGG‑GGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAAT > NC_000913/371443‑371715 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |