BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,291,892	T→C	D184D (GAT→GAC)	yraK →	putative fimbrial adhesin YraK

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,291,892	0	T	C	100.0%	375.8 / NA	102	D184D (GAT→GAC)	yraK	putative fimbrial adhesin YraK
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (49/53); total (49/53)

Only 100 of 104 total aligned reads displayed.

TCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGATATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCACCGCCCCACAGTCGTGCAAAATTAATCAGGGCGAT  >  NC_000913/3291758‑3292024

tCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGc                                                                                                                                 >  1:758294/1‑140 (MQ=255)

 ctgctgCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGcc                                                                                                                                <  2:653958/140‑1 (MQ=255)

 ctgctgCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGcc                                                                                                                                <  1:848734/140‑1 (MQ=255)

   gctgcAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGcc                                                                                                                                <  2:97380/138‑1 (MQ=255)

   gctgcAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGt                                                                                                                              >  1:1124724/1‑140 (MQ=255)

   actgcAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGcc                                                                                                                                >  1:97380/2‑138 (MQ=255)

    ctgcAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTc                                                                                                                             >  1:897029/1‑140 (MQ=255)

     tgcAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCa                                                                                                                            >  1:334303/1‑140 (MQ=255)

     tgcAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCa                                                                                                                            >  1:329429/1‑140 (MQ=255)

     tgcAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCa                                                                                                                            >  2:329236/1‑140 (MQ=255)

       cAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCAtt                                                                                                                          >  1:1108783/1‑140 (MQ=255)

       cAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATA‑TGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGcc                                                                                                                                <  2:235763/133‑1 (MQ=255)

       cAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATA‑TGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGcc                                                                                                                                >  1:235763/1‑133 (MQ=255)

         aCCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGcc                                                                                                                                >  1:449132/1‑132 (MQ=255)

         aCCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGcc                                                                                                                                <  2:449132/132‑1 (MQ=255)

         aCCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTaa                                                                                                                        >  1:771615/1‑140 (MQ=255)

         aCCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTaa                                                                                                                        >  1:523698/1‑140 (MQ=255)

                      tttGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATTTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTc                                                                                                           <  2:854308/140‑1 (MQ=255)

                       ttGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGtag                                                                                                          <  2:770965/140‑3 (MQ=255)

                       ttGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCg                                                                                                          <  1:1172165/140‑1 (MQ=255)

                       ttGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCg                                                                                                          <  2:1054145/140‑1 (MQ=255)

                       ttGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCg                                                                                                          <  1:864783/140‑1 (MQ=255)

                       ttGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCg                                                                                                          <  1:566910/140‑1 (MQ=255)

                                  aTACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGa                                                                                               <  2:329429/140‑1 (MQ=255)

                                  aTACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGa                                                                                               <  2:334303/140‑1 (MQ=255)

                                  aTACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGa                                                                                               <  1:979241/140‑1 (MQ=255)

                                  aTACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGa                                                                                               <  1:482574/140‑1 (MQ=255)

                                  aTACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGa                                                                                               >  1:1120446/1‑140 (MQ=255)

                                     cGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGc                                                                                            <  1:128997/140‑1 (MQ=255)

                                     cGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTAACCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGc                                                                                            <  1:414309/140‑1 (MQ=255)

                                        ctcGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCg                                                                                         >  1:55698/1‑140 (MQ=255)

                                         tcGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGt                                                                                        >  1:1190361/1‑140 (MQ=255)

                                            ttATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTa                                                                                     >  1:455899/1‑140 (MQ=255)

                                                 gACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGt                                                                                >  1:464960/1‑140 (MQ=255)

                                                 gACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGt                                                                                >  1:985888/1‑140 (MQ=255)

                                                 gACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGt                                                                                <  1:329236/140‑1 (MQ=255)

                                                      gTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACtt                                                                           >  2:743572/1‑140 (MQ=255)

                                                       ttAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTc                                                                          >  2:190610/1‑140 (MQ=255)

                                                        tAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTcc                                                                         <  2:868134/140‑1 (MQ=255)

                                                         aaTATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCa                                                                        >  2:381561/1‑140 (MQ=255)

                                                                gTGCGAACACCACCTTTACCCTGTATGTCACCAAGTCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTa                                                                 >  1:1013401/1‑140 (MQ=255)

                                                                 tGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCa                                                                        >  1:60931/1‑132 (MQ=255)

                                                                 tGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCa                                                                        <  2:60931/132‑1 (MQ=255)

                                                                 tGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAg                                                                >  1:587336/1‑140 (MQ=255)

                                                                    gAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCa                                                             >  1:12547/1‑140 (MQ=255)

                                                                     aaCACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCaa                                                            >  1:588408/1‑140 (MQ=255)

                                                                          caccTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTAt                                                       <  2:947742/140‑1 (MQ=255)

                                                                               ttACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGAtt                                                  >  2:805854/1‑140 (MQ=255)

                                                                                   ccTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAgg                                              <  2:758294/140‑1 (MQ=255)

                                                                                    cTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAggg                                             <  1:805854/140‑1 (MQ=255)

                                                                                      gTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGaa                                           <  2:1190361/140‑1 (MQ=255)

                                                                                       tATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTa                                                        >  2:1075469/1‑126 (MQ=255)

                                                                                       tATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTa                                                        <  1:1075469/126‑1 (MQ=255)

                                                                                       tATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGaaa                                          >  1:1109822/1‑140 (MQ=255)

                                                                                       tATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGaaa                                          >  2:607669/1‑140 (MQ=255)

                                                                                       tATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGaaa                                          >  2:90572/1‑140 (MQ=255)

                                                                                            cACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCa                                     >  2:1147918/1‑140 (MQ=255)

                                                                                             cccAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCAc                                    <  1:174294/139‑1 (MQ=255)

                                                                                             aCCAAGTCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCAc                                    <  2:1013401/140‑1 (MQ=255)

                                                                                             aCCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCAc                                    <  1:381561/140‑1 (MQ=255)

                                                                                             aCCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCAc                                    <  1:607669/140‑1 (MQ=255)

                                                                                             aCCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCAc                                    <  2:455899/140‑1 (MQ=255)

                                                                                             aCCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCAc                                    <  1:314796/140‑1 (MQ=255)

                                                                                             aCCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCAc                                    <  2:771615/140‑1 (MQ=255)

                                                                                             aCCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCAc                                    >  2:335731/1‑140 (MQ=255)

                                                                                             aCCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCAc                                    <  2:1120446/140‑1 (MQ=255)

                                                                                             aCCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCAc                                    <  2:587336/140‑1 (MQ=255)

                                                                                             aCCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCAc                                    <  1:190610/140‑1 (MQ=255)

                                                                                             aCCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCAc                                    <  1:335731/140‑1 (MQ=255)

                                                                                             aCCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCAc                                    <  1:1146900/140‑1 (MQ=255)

                                                                                             aCCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCAc                                    <  2:1109822/140‑1 (MQ=255)

                                                                                               cAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGCCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGGTATCGATTCAGGGAAATCTCACCg                                  >  2:30964/1‑140 (MQ=255)

                                                                                                 aGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCTGGGAAAtct                                       >  2:1097701/1‑133 (MQ=255)

                                                                                                 aGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAAtct                                       <  1:1097701/133‑1 (MQ=255)

                                                                                                 aGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCACCg                                  <  1:350316/138‑1 (MQ=255)

                                                                                                 aGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCACCg                                  >  2:350316/1‑138 (MQ=255)

                                                                                                 aGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCACCGcc                                >  1:614940/1‑140 (MQ=255)

                                                                                                 aGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCACCGcc                                >  2:829792/1‑140 (MQ=255)

                                                                                                 aGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCACCGcc                                >  2:592665/1‑140 (MQ=255)

                                                                                                 aGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCACCGcc                                >  2:1203794/1‑140 (MQ=255)

                                                                                                 aGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCACCGcc                                >  2:702327/1‑140 (MQ=255)

                                                                                                 aGCCATTTCTCGGCTCGATGACCATTCCG‑AAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCAc                                    <  2:687907/135‑1 (MQ=255)

                                                                                                 aGCCATTTCTCGGCTCGATGACCATTCCG‑AAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCAc                                    >  1:687907/1‑135 (MQ=255)

                                                                                                       ttCTCGGCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCACCGCCCCACAg                          <  1:1067424/140‑1 (MQ=255)

                                                                                                            ggCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGCCTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCACCGCCCCCCAGTCGTg                     <  2:358269/140‑1 (MQ=255)

                                                                                                            ggCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCACCGCCCCACAGTCGTg                     <  2:560460/140‑1 (MQ=255)

                                                                                                            ggCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCACCGCCCCACAGTCGTg                     <  1:1013970/140‑1 (MQ=255)

                                                                                                            ggCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCACCGCCCCACAGTCGTg                     <  1:592665/140‑1 (MQ=255)

                                                                                                            ggCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCACCGCCCCACAGTCGTg                     >  1:846327/1‑140 (MQ=255)

                                                                                                            ggCTCGATGACCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCACCGCCCCACAGTCGTg                     <  2:1108783/140‑1 (MQ=255)

                                                                                                                     aCCATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCACCGCCCCACAGTCGTGCAAAATTaa            <  2:523698/140‑1 (MQ=255)

                                                                                                                      ccATTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCACCGCCCCACAGTCGTGCAAAATTAAt           <  2:897029/140‑1 (MQ=255)

                                                                                                                        aTTCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCACCGCCCCACAGTCGTGCAAAATTAATCa         >  2:476942/1‑140 (MQ=255)

                                                                                                                          tCCGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCACCGCCCCACAGTCGTGCAAAATTAATCAgg       >  2:833235/1‑140 (MQ=255)

                                                                                                                           ccGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCACCGCCCCACAGTCGTGCAAAATTAATCAggg      <  1:510387/140‑1 (MQ=255)

                                                                                                                           ccGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCACCGCCCCACAGTCGTGCAAAATTAATCAggg      >  1:1146815/1‑140 (MQ=255)

                                                                                                                           ccGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCACCGCCCCACAGTCGTGCAAAATTAATCAggg      <  2:1146815/140‑1 (MQ=255)

                                                                                                                           ccGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTAATCGATTCAGGGAAATCTCACCGCCCCACAGTCGTGCAAAATTAATCAggg      <  2:215191/140‑1 (MQ=255)

                                                                                                                            cGAAAACGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCACCGCCCCACAGTCGTGCAAAATTAATCAGGGc     >  1:102721/1‑140 (MQ=255)

                                                                                                                               aaaCGGACATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCACCGCCCCACAGTCGTGCAAAATTAATCAGGGCGAt  <  1:702327/140‑1 (MQ=255)

TCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGATATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCACCGCCCCACAGTCGTGCAAAATTAATCAGGGCGAT  >  NC_000913/3291758‑3292024

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`