Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,939,203 A→G E326G (GAA→GGA) 
V470V (GTT→GTC
rbsR →
hsrA ←
DNA‑binding transcriptional dual regulator RbsR
putative transporter HsrA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,939,2030AG100.0% 337.9 / NA 91E326G (GAA→GGA) 
V470V (GTT→GTC
rbsR
hsrA
DNA‑binding transcriptional dual regulator RbsR
putative transporter HsrA
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (48/43);  total (48/43)

TGACGCCACCATTAACCACTATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGAACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGTAATAATGCCCATTGTGATAAACGTATAGTGGAATTGTTC  >  NC_000913/3939071‑3939334
                                                                                                                                    |                                                                                                                                   
tGACGCCACCATTAACCACTATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGt                                                                                                                              <  1:615647/140‑1 (MQ=255)
tGACGCCACCATTAACCACTATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGt                                                                                                                              >  1:527793/1‑140 (MQ=255)
tGACGCCACCATTAACCACTATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGt                                                                                                                              >  2:615647/1‑140 (MQ=255)
      caccaTTAACCACTATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCt                                                                                                                        <  1:1018810/140‑1 (MQ=255)
              aCCACTATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTa                                                                                                                >  2:684430/1‑140 (MQ=255)
                cACTATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACg                                                                                                              <  2:522982/140‑1 (MQ=255)
                   tATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCt                                                                                                                        <  1:620265/127‑1 (MQ=255)
                   tATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCt                                                                                                                        <  1:466738/127‑1 (MQ=255)
                   tATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCt                                                                                                                        >  2:466738/1‑127 (MQ=255)
                   tATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCt                                                                                                                        >  2:620265/1‑127 (MQ=255)
                    aTCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGt                                                                                                          >  1:1071909/1‑140 (MQ=255)
                     tCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCt                                                                                                                        <  1:418131/125‑1 (MQ=255)
                     tCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCt                                                                                                                        >  2:418131/1‑125 (MQ=255)
                         ccaACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCtttt                                                                                                     >  1:179239/1‑140 (MQ=255)
                          caACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTg                                                                                                    >  1:689503/1‑140 (MQ=255)
                            aCCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTATGCTGTCTTTTGAt                                                                                                  <  2:897591/140‑1 (MQ=255)
                            aCCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGAt                                                                                                  <  1:790709/140‑1 (MQ=255)
                            aCCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGAt                                                                                                  >  1:1058738/1‑140 (MQ=255)
                            aCCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGAt                                                                                                  <  1:31648/140‑1 (MQ=255)
                             ccGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATc                                                                                                 <  2:945684/140‑1 (MQ=255)
                             ccGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATc                                                                                                 >  1:1219421/1‑140 (MQ=255)
                               gAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCaa                                                                                               >  2:1031474/1‑140 (MQ=255)
                                aaaGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCaaa                                                                                              <  1:684430/140‑1 (MQ=255)
                                               gAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGgtt                                                                               <  1:675629/140‑1 (MQ=255)
                                                 gCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCgg                                                                                 <  1:119016/136‑1 (MQ=255)
                                                 gCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCgg                                                                                 >  2:119016/1‑136 (MQ=255)
                                                 gCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGgttgt                                                                             >  2:356681/1‑140 (MQ=255)
                                                  cTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGgttgtt                                                                            >  1:740892/1‑140 (MQ=255)
                                                    ggCGATTGATGTACTCATCCATCGGATAACCAAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGtttt                                                                          >  1:652651/1‑140 (MQ=255)
                                                      cGATTGATGTACTCATCCATCGGATATCCCAGCCGATCTTTCAGCAACAACGATTACAACGTTCTCCGATTCTGATGGGACGCGGTTCGTCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCa                                                                        <  2:179239/140‑1 (MQ=255)
                                                      cGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAattatt                                                                                         <  1:401107/123‑1 (MQ=255)
                                                      cGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAattatt                                                                                         >  2:401107/1‑123 (MQ=255)
                                                      cGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCa                                                                        >  1:1185127/1‑140 (MQ=255)
                                                      cGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCa                                                                        <  2:909797/140‑1 (MQ=255)
                                                      cGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCa                                                                        <  1:892177/140‑1 (MQ=255)
                                                      cGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCa                                                                        <  2:527793/140‑1 (MQ=255)
                                                           gATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGc                                                                   <  2:1058738/140‑1 (MQ=255)
                                                            aTGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCa                                                                        <  1:255094/134‑1 (MQ=255)
                                                            aTGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCa                                                                        >  2:255094/1‑134 (MQ=255)
                                                              gTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATg                                                                <  2:579343/140‑1 (MQ=255)
                                                                   catccatcGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACAt                                                           >  2:1220124/1‑140 (MQ=255)
                                                                   catccatcGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACAt                                                           >  2:438176/1‑140 (MQ=255)
                                                                    atccatcGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACAtt                                                          >  2:1191032/1‑140 (MQ=255)
                                                                      ccatcGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATtgc                                                        >  1:642023/1‑140 (MQ=255)
                                                                      ccatcGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATtgc                                                        >  1:153593/1‑140 (MQ=255)
                                                                         tcGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATg                                                                <  1:889052/129‑1 (MQ=255)
                                                                         tcGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATg                                                                >  2:889052/1‑129 (MQ=255)
                                                                         tcGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATtgctgc                                                     >  1:868879/1‑140 (MQ=255)
                                                                         tcGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATtgctgc                                                     >  2:566217/1‑140 (MQ=255)
                                                                          cGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTgctgct                                                    <  2:1219421/140‑1 (MQ=255)
                                                                          cGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTgctgct                                                    >  2:958341/1‑140 (MQ=255)
                                                                            gATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGa                                                  <  2:642023/140‑1 (MQ=255)
                                                                              tAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAg                                                <  2:868879/140‑1 (MQ=255)
                                                                               aaCCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGc                                               <  2:1071909/140‑1 (MQ=255)
                                                                               aaCCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGc                                               <  1:337308/140‑1 (MQ=255)
                                                                               aaCCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGc                                               <  1:438176/140‑1 (MQ=255)
                                                                                aCCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGa                                                  >  1:414058/1‑136 (MQ=255)
                                                                                aCCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGa                                                  <  2:414058/136‑1 (MQ=255)
                                                                                aCCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCa                                              >  1:199295/1‑140 (MQ=255)
                                                                                aCCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCa                                              <  1:566217/140‑1 (MQ=255)
                                                                                    aGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGc                                               >  1:1055742/1‑135 (MQ=255)
                                                                                    aGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGc                                               <  2:1055742/135‑1 (MQ=255)
                                                                                    aGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAg                                          <  1:1191032/140‑1 (MQ=255)
                                                                                    aGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAg                                          <  1:650241/140‑1 (MQ=255)
                                                                                        gACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGtaat                                      <  2:652651/140‑1 (MQ=255)
                                                                                         aCCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGtaata                                     >  2:110945/1‑140 (MQ=255)
                                                                                         aCCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGtaata                                     >  2:93673/1‑140 (MQ=255)
                                                                                           ccTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGTaataat                                   >  1:459228/1‑140 (MQ=255)
                                                                                           ccTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGTaataat                                   >  2:1186487/1‑140 (MQ=255)
                                                                                           ccTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGTaataat                                   >  1:89180/1‑140 (MQ=255)
                                                                                           ccTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGTaataat                                   >  1:599424/1‑140 (MQ=255)
                                                                                           ccTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGAAACAGTattaat                                   >  2:239642/1‑140 (MQ=255)
                                                                                               cAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGTAATAATGccc                               <  1:356681/140‑1 (MQ=255)
                                                                                               cAGCAACAACGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGTAATAATGccc                               >  1:1201873/1‑140 (MQ=255)
                                                                                                    acaacGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGTAATAATGc                                 <  2:274323/133‑1 (MQ=255)
                                                                                                    acaacGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGTAATAATGc                                 >  1:274323/1‑133 (MQ=255)
                                                                                                    acaacGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGTAATAATGCCCATtgt                          <  2:1201873/140‑1 (MQ=255)
                                                                                                     caacGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGTAATAATGCCCATtgtg                         >  2:701061/1‑140 (MQ=255)
                                                                                                      aacGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGTAATAATGCCCATTGTGa                        <  1:1186487/140‑1 (MQ=255)
                                                                                                      aacGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGTAATAATGCCCATTGTGa                        <  2:459228/140‑1 (MQ=255)
                                                                                                       acGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGTAATAATGCCCATTGTGAt                       >  1:387446/1‑140 (MQ=255)
                                                                                                        cGATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGTAATAATGCCCATTGTGATa                      >  2:889762/1‑140 (MQ=255)
                                                                                                         gATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGTAATAATGCCCATTGTGATaa                     <  1:110945/140‑1 (MQ=255)
                                                                                                         gATTACAACTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGTAATAATGCCCATTGTGATaa                     <  1:1220124/140‑1 (MQ=255)
                                                                                                                aCTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGTAATAATGCCCATTGTGATaa                     <  2:713662/133‑1 (MQ=255)
                                                                                                                aCTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGTAATAATGCCCATTGTGATaa                     >  1:713662/1‑133 (MQ=255)
                                                                                                                 cTTACTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGTAATAATGCCCATTGTGATAAACGTATAg             <  1:958341/140‑1 (MQ=255)
                                                                                                                    aCTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGTAATAATGCCCATTGTGATAAACGTATAGTgg          >  2:944589/1‑140 (MQ=255)
                                                                                                                    aCTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGTAATAATGCCCATTGTGATAAACGTATAGTgg          <  2:1185127/140‑1 (MQ=255)
                                                                                                                    aCTCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGTAATAATGCCCATTGTGATAAACGTATAGTgg          >  1:380942/1‑140 (MQ=255)
                                                                                                                      tCCGATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGTAATAATGCCCATTGTGATAAACGTATAGTGGaa        >  2:400328/1‑140 (MQ=255)
                                                                                                                         gATTCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGTAATAATGCCCATTGTGATAAACGTATAGTGGAATTg     >  1:115305/1‑140 (MQ=255)
                                                                                                                            tCTGATGGGACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGTAATAATGCCCATTGTGATAAACGTATAGTGGAATTGTTc  <  2:380942/140‑1 (MQ=255)
                                                                                                                                    |                                                                                                                                   
TGACGCCACCATTAACCACTATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGAACGCGGTTCGGCTTAGATTTACGCTGTCTTTTGATCAAATTATTACCATCGGTTGTTTTCAGAAGCATGAACATTGCTGCTGAAGCAACAGTAATAATGCCCATTGTGATAAACGTATAGTGGAATTGTTC  >  NC_000913/3939071‑3939334

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: