Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	202,830	C→T	R91C (CGC→TGC)	lpxA →	UDP‑N‑acetylglucosamine acyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	202,830	0	C	T	100.0%	310.1 / NA	87	R91C (CGC→TGC)	lpxA	UDP‑N‑acetylglucosamine acyltransferase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (40/47);  total (40/47)

TCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACTTACTGATGATCAACGCGCACATTGCGCACGATTGTACGGTAGGTAACCGCTGTATTCTC  >  NC_000913/202697‑202964                                                                                                                                      |                                                                                                                                       tcACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTc                                                                                                                                  >  1:350010/1‑140 (MQ=255) tcACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTc                                                                                                                                  >  1:200365/1‑140 (MQ=255)   aCGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTcgc                                                                                                                                <  1:1077077/140‑1 (MQ=255)    cGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTcgcg                                                                                                                               >  1:919761/1‑140 (MQ=255)    cGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTcgcg                                                                                                                               >  1:532647/1‑140 (MQ=255)          cGTGAATGGTCATACTAAAATTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCg                                                                                                                         <  1:1015681/140‑1 (MQ=255)           gTGAATGGTCATACTAAAATTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCGGTGTGGAAATCGGCGATCGTAACTGCATTCGTGAAAGCgg                                                                                                                        <  2:748512/140‑2 (MQ=255)           gTGAATGGTCATACTAAAATTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGt                                                                                                                        <  2:63810/140‑1 (MQ=255)           gTGAATGGTCATACTAAAATTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGt                                                                                                                        >  2:431459/1‑140 (MQ=255)                   tCATACTAAAATTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTc                                                                                                                >  2:503873/1‑140 (MQ=255)                   tCATACTAAAATTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTc                                                                                                                >  1:639819/1‑140 (MQ=255)                      tACTAAAATTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATc                                                                                                             >  2:423970/1‑140 (MQ=255)                       aCTAAAATTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCg                                                                                                            >  1:938426/1‑140 (MQ=255)                       aCTAAAATTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCg                                                                                                            >  2:350646/1‑140 (MQ=255)                       aCTAAAATTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCg                                                                                                            <  1:423970/140‑1 (MQ=255)                        cTAAAATTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGt                                                                                                           >  1:322158/1‑140 (MQ=255)                        cTAAAATTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGt                                                                                                           >  1:719527/1‑140 (MQ=255)                         tAAAATTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTg                                                                                                          <  1:1187484/140‑1 (MQ=255)                           aaaTTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGc                                                                                                        >  2:649366/1‑140 (MQ=255)                            aaTTGGCCGCGATAGTGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGca                                                                                                       <  1:258306/140‑1 (MQ=255)                            aaTTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGTACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGca                                                                                                       <  1:1155874/140‑1 (MQ=255)                            aaTTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGca                                                                                                       <  2:938426/140‑1 (MQ=255)                            aaTTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGca                                                                                                       <  2:645492/140‑1 (MQ=255)                            aaTTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGca                                                                                                       <  2:602290/140‑1 (MQ=255)                            aaTTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGca                                                                                                       <  2:350010/140‑1 (MQ=255)                            aaTTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGca                                                                                                       <  1:649366/140‑1 (MQ=255)                            aaTTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGca                                                                                                       <  1:431459/140‑1 (MQ=255)                            aaTTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGca                                                                                                       <  1:144206/140‑1 (MQ=255)                            aaTTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGca                                                                                                       <  1:350646/140‑1 (MQ=255)                             aTTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGcac                                                                                                      >  2:1004920/1‑140 (MQ=255)                             aTTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGcac                                                                                                      >  2:251365/1‑140 (MQ=255)                             aTTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGca                                                                                                       >  1:502653/1‑139 (MQ=255)                             aTTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGca                                                                                                       <  2:502653/139‑1 (MQ=255)                                 gCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGca                                                                                                       >  1:533121/1‑135 (MQ=255)                                 gCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGca                                                                                                       <  2:842077/135‑1 (MQ=255)                                 gCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGca                                                                                                       <  2:800897/135‑1 (MQ=255)                                 gCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGca                                                                                                       >  1:800897/1‑135 (MQ=255)                                 gCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGca                                                                                                       >  1:842077/1‑135 (MQ=255)                                 gCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGca                                                                                                       <  2:533121/135‑1 (MQ=255)                                 gCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTc                                                                                                  >  1:558175/1‑140 (MQ=255)                                 gCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTc                                                                                                  >  1:45685/1‑140 (MQ=255)                                     cgATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGca                                                                                                       >  1:1035612/1‑131 (MQ=255)                                     cgATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGca                                                                                                       <  2:1035612/131‑1 (MQ=255)                                       aTAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGc                                                                                            >  2:893901/1‑140 (MQ=255)                                               aTTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTgg                                                                                       >  1:261764/1‑137 (MQ=255)                                               aTTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTgg                                                                                       <  2:261764/137‑1 (MQ=255)                                                  tATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGAc                                                                                 >  1:744840/1‑140 (MQ=255)                                                  tATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGAc                                                                                 >  1:376795/1‑140 (MQ=255)                                                    tCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGa                                                                               >  1:1054508/1‑140 (MQ=255)                                                    tCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGa                                                                               >  2:156221/1‑140 (MQ=255)                                                          cGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGTGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTgg                                                                         <  2:720824/140‑1 (MQ=255)                                                          cGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTgg                                                                         >  1:419544/1‑140 (MQ=255)                                                             cTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCa                                                                      >  2:398014/1‑140 (MQ=255)                                                               ccATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGc                                                                    <  2:719527/140‑1 (MQ=255)                                                               ccATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGc                                                                    <  2:322158/140‑1 (MQ=255)                                                                 aacGGCGAAGTTAACCCGGATCTGAAATATGCTGGCGAACCGGCCCGTGTGGAAATCGGCGAACGTAACCGCATTCGCGAAAGCGTCCCCAATCATCGTGGCCCAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGa                                                                  <  2:532647/138‑1 (MQ=255)                                                                 aTCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAATCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGACAGCGa                                                                  <  2:1104126/140‑1 (MQ=255)                                                                 aTCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGa                                                                  <  2:45685/140‑1 (MQ=255)                                                                 aTCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGa                                                                  <  2:200365/140‑1 (MQ=255)                                                                 aTCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGa                                                                  <  2:1054508/140‑1 (MQ=255)                                                                 aTCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGa                                                                  <  2:752805/140‑1 (MQ=255)                                                                 aTCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGa                                                                  <  1:893901/140‑1 (MQ=255)                                                                 aTCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGa                                                                  <  2:919761/140‑1 (MQ=255)                                                                     gCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCACGGCGGTGGATTGACGAAGGTGGGCAGCGACAAc                                                              <  2:1116748/140‑1 (MQ=255)                                                                      cGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACt                                                             >  2:3424/1‑140 (MQ=255)                                                                      cGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACt                                                             <  1:1164721/140‑1 (MQ=255)                                                                                 aGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACTTACTGATGATc                                                  <  1:251365/140‑1 (MQ=255)                                                                                   gATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACTTACTGATGATCaa                                                >  1:385945/1‑140 (MQ=255)                                                                                    aTCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACTTACTGATGATCAAc                                               <  2:419544/140‑1 (MQ=255)                                                                                         aaaTATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACTTACTGATGATCAACGCGca                                          >  1:161451/1‑140 (MQ=255)                                                                                           atatGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTGACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACTTACTGATGATCAACGCGcaca                                        <  2:885560/140‑1 (MQ=255)                                                                                           atatGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACTTACTGATGATCAACGCGcaca                                        <  1:1033694/140‑1 (MQ=255)                                                                                              tGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACTTACTGATGATCAACGCGCACATTg                                     >  2:162223/1‑140 (MQ=255)                                                                                              tGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACTTACTGATGATCAACGCGCACATTg                                     >  2:1176577/1‑140 (MQ=255)                                                                                                  ggCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACTTACTGATGATCAACGCGCACATTGCGCa                                 <  1:1176577/140‑1 (MQ=255)                                                                                                  ggCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACTTACTGATGATCAACGCGCACATTGCGCa                                 <  1:3424/140‑1 (MQ=255)                                                                                                  ggCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACTTACTGATGATCAACGCGCACATTGCGCa                                 <  2:1181674/140‑1 (MQ=255)                                                                                                   gCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACTTACTGATGATCAACGCGCACATTGCGCAc                                >  1:1114036/1‑140 (MQ=255)                                                                                                   gCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACTTACTGATGATCAACGCGCACATTGCGCAc                                >  1:534949/1‑140 (MQ=255)                                                                                                   gCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACTTACTGATGATCAACGCGCACATTGCGCAc                                >  1:737849/1‑140 (MQ=255)                                                                                                   gCGAACCGACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACTTACTGATGATCAACGCGCACATTGCGCAc                                <  2:639819/140‑1 (MQ=255)                                                                                                          gACCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGTACAGTCCAGGGCGGTGGCTTGACGAAGGTGGGCAGCGACAACTTACTGATGATCAACGCGCACATTGCGCACGATTGTa                         <  2:1095270/140‑1 (MQ=255)                                                                                                           aCCCGTGTGGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACTTACTGATGATCAACGCGCACATTGCGCACGATTGTAc                        <  1:1004920/140‑1 (MQ=255)                                                                                                                tgtgGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACTTACTGATGATCAACGCGCACATTGCGCACGATTGTACggtag                   >  1:455598/1‑140 (MQ=255)                                                                                                                  tgGAAATCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACTTACTGATGATCAACGCGCACATTGCGCACGATTGTACggtaggt                 <  1:1107886/140‑1 (MQ=255)                                                                                                                     aaaTCGGCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACTTACTGATGATCAACGCGCACATTGCGCACGATTGTACGGTAGGTAAc              <  2:376795/140‑1 (MQ=255)                                                                                                                          ggCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACTTACTGATGATCAACGCGCACATTGCGCACGATTGTACggtaggt                 >  1:349946/1‑132 (MQ=255)                                                                                                                          ggCGATCGTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACTTACTGATGATCAACGCGCACATTGCGCACGATTGTACggtaggt                 <  2:349946/132‑1 (MQ=255)                                                                                                                                 gTAACTGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACTTACTGATGATCAACGCGCACATTGCGCACGATTGTACGGTAGGTAACCGCTGTATtctc  <  2:744840/140‑1 (MQ=255)                                                                                                                                      |                                                                                                                                       TCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACTTACTGATGATCAACGCGCACATTGCGCACGATTGTACGGTAGGTAACCGCTGTATTCTC  >  NC_000913/202697‑202964

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑