BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,590,521	A→G	pseudogene (16/203 nt)	yneL ←	putative HTH‑type transcriptional regulator YneL

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,590,521	0	A	G	100.0%	410.9 / NA	110	pseudogene (16/203 nt)	yneL	putative HTH‑type transcriptional regulator YneL
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (49/61); total (49/61)

Only 100 of 111 total aligned reads displayed.

ACTCTCCAAACATCCGCGAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTC  >  NC_000913/1590384‑1590653

 ctctCCAAACATCCGCGAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCg                                                                                                                                   >  1:894472/1‑140 (MQ=255)

   ctcCAAACATCCGCGAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGa                                                                                                                                 >  2:96711/1‑140 (MQ=255)

   ctcCAAACATCCGCGAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGa                                                                                                                                 >  1:1112436/1‑140 (MQ=255)

    tcCAAACATCCGCGAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAg                                                                                                                                <  2:635519/140‑1 (MQ=255)

    tcCAAACATCCGCGAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAg                                                                                                                                <  1:720874/140‑1 (MQ=255)

      cAAACATCCGCGAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTg                                                                                                                              >  1:337824/1‑140 (MQ=255)

         aCATCCGCGAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGAc                                                                                                                           <  1:709217/140‑1 (MQ=255)

         aCATCCGCGAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGAc                                                                                                                           <  2:435288/140‑1 (MQ=255)

            tCCGCGAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCa                                                                                                                        >  2:1046026/1‑140 (MQ=255)

             ccGCGAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCAt                                                                                                                       >  2:815797/1‑140 (MQ=255)

              cgcgAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGAc                                                                                                                           <  1:114045/135‑1 (MQ=255)

              cgcgAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGAc                                                                                                                           >  2:114045/1‑135 (MQ=255)

              cgcgAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCAtt                                                                                                                      >  1:385985/1‑140 (MQ=255)

              cgcgAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCAtt                                                                                                                      >  1:776341/1‑140 (MQ=255)

              cgcgAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCAtt                                                                                                                      <  1:906006/140‑1 (MQ=255)

              cgcgAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCAtt                                                                                                                      >  2:1163106/1‑140 (MQ=255)

              cgcgAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCAtt                                                                                                                      >  2:339988/1‑140 (MQ=255)

              cgcgAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCAtt                                                                                                                      <  2:439892/140‑1 (MQ=255)

              cgcgAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCAtt                                                                                                                      <  2:616981/140‑1 (MQ=255)

               gcgAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTc                                                                                                                     <  2:337824/140‑1 (MQ=255)

                cgAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTcc                                                                                                                    >  1:228323/1‑140 (MQ=255)

                       tCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGa                                                                                                             >  2:273664/1‑140 (MQ=255)

                        cccGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGAt                                                                                                            <  1:896473/140‑1 (MQ=255)

                        cccGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGAt                                                                                                            <  1:1019400/140‑1 (MQ=255)

                         ccGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATc                                                                                                           <  1:610911/140‑1 (MQ=255)

                          cGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATcc                                                                                                          <  2:1132300/140‑1 (MQ=255)

                          cGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATcc                                                                                                          <  2:712886/140‑1 (MQ=255)

                            aCTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGt                                                                                                        <  2:776883/140‑1 (MQ=255)

                             cTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCt                                                                                                                >  2:764747/1‑131 (MQ=255)

                             cTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCt                                                                                                                <  1:764747/131‑1 (MQ=255)

                                   tGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTaaa                                                                                                 <  2:409061/140‑1 (MQ=255)

                                     ggATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATa                                                                                               <  1:402815/140‑1 (MQ=255)

                                     ggATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATa                                                                                               <  1:662415/140‑1 (MQ=255)

                                       aTAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAg                                                                                             <  1:815797/140‑1 (MQ=255)

                                        tAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGt                                                                                            >  2:94675/1‑140 (MQ=255)

                                        tAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGt                                                                                            >  1:1127320/1‑140 (MQ=255)

                                          gCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTaa                                                                                          >  1:104761/1‑140 (MQ=255)

                                          gCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTaa                                                                                          <  2:385985/140‑1 (MQ=255)

                                          gCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTaa                                                                                          <  1:339988/140‑1 (MQ=255)

                                           cTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAAc                                                                                         >  1:1210016/1‑140 (MQ=255)

                                            tttCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACa                                                                                        <  1:702728/140‑1 (MQ=255)

                                                gTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCAc                                                                                    >  1:307725/1‑140 (MQ=255)

                                                gTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCAc                                                                                    >  1:228618/1‑140 (MQ=255)

                                                 tAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCAcc                                                                                   <  2:675137/140‑1 (MQ=255)

                                                 tAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCAcc                                                                                   <  1:1209976/140‑1 (MQ=255)

                                                   aCCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCct                                                                                 <  2:1210016/140‑1 (MQ=255)

                                                    ccGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCctc                                                                                <  2:104761/140‑1 (MQ=255)

                                                    ccGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCctc                                                                                <  2:435249/140‑1 (MQ=255)

                                                    ccGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCctc                                                                                <  1:1046026/140‑1 (MQ=255)

                                                       aCAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTgg                                                                             >  2:467397/1‑140 (MQ=255)

                                                         aGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGgtg                                                                           <  1:204448/140‑1 (MQ=255)

                                                          gCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCGGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGgtgt                                                                          >  1:404048/1‑140 (MQ=255)

                                                              aGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCCGGTGTTTTc                                                                      >  1:823217/1‑140 (MQ=255)

                                                               ggCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCg                                                                     <  2:522538/140‑1 (MQ=255)

                                                                gctgctGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGt                                                                    <  2:228618/140‑1 (MQ=255)

                                                                gctgctGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGt                                                                    >  1:290343/1‑140 (MQ=255)

                                                                gctgctGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGt                                                                    >  2:692898/1‑140 (MQ=255)

                                                                   gctgTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATg                                                                 <  1:477656/140‑1 (MQ=255)

                                                                    ctgTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACTGCACCCTCTGGTGTTTTCGTATGc                                                                <  2:91354/140‑1 (MQ=255)

                                                                    ctgTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGc                                                                <  2:955135/140‑1 (MQ=255)

                                                                     tgtgGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCa                                                               <  1:153997/140‑1 (MQ=255)

                                                                     tgtgGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCa                                                               >  1:898480/1‑140 (MQ=255)

                                                                     tgtgGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCa                                                               >  2:274474/1‑140 (MQ=255)

                                                                           gACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCt                                                         <  1:1163106/140‑1 (MQ=255)

                                                                                 gTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTAt                                                       >  1:1145637/1‑136 (MQ=255)

                                                                                 gTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTAt                                                       <  2:1145637/136‑1 (MQ=255)

                                                                                 gTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCga                                                   >  2:499810/1‑140 (MQ=255)

                                                                                       ttcattcaGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATg                                                      >  2:235287/1‑131 (MQ=255)

                                                                                       ttcattcaGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATg                                                      <  1:235287/131‑1 (MQ=255)

                                                                                       ttcattcaGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCgacagaca                                             >  2:1155640/1‑140 (MQ=255)

                                                                                         cattcaGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACt                                           <  2:910730/140‑1 (MQ=255)

                                                                                         cattcaGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACt                                           <  1:705705/140‑1 (MQ=255)

                                                                                         cattcaGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACt                                           <  1:786471/140‑1 (MQ=255)

                                                                                          attcaGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTg                                          >  1:731229/1‑140 (MQ=255)

                                                                                            tcaGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTgcg                                        >  1:572363/1‑140 (MQ=255)

                                                                                            tcaGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTg                                          >  1:1008166/1‑138 (MQ=255)

                                                                                            tcaGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTg                                          <  2:1008166/138‑1 (MQ=255)

                                                                                                cATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGctct                                    >  1:59254/1‑140 (MQ=255)

                                                                                                cATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGctct                                    >  2:1052264/1‑140 (MQ=255)

                                                                                                cATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGctct                                    <  2:27275/140‑1 (MQ=255)

                                                                                                     gTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCa                               <  2:290343/140‑1 (MQ=255)

                                                                                                     gTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCa                               <  1:692898/140‑1 (MQ=255)

                                                                                                     gTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCa                               <  2:1127320/140‑1 (MQ=255)

                                                                                                     gTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCa                               >  1:538233/1‑140 (MQ=255)

                                                                                                      tCGCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACTCTGCGCTCTTAGCAt                              <  2:898480/140‑1 (MQ=255)

                                                                                                        gCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTg                                          <  2:1069806/126‑1 (MQ=255)

                                                                                                        gCCTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTg                                          >  1:1069806/1‑126 (MQ=255)

                                                                                                          cTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTgc                                         >  1:408360/1‑125 (MQ=255)

                                                                                                          cTGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTgc                                         <  2:408360/125‑1 (MQ=255)

                                                                                                           tGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGc                         <  1:1123584/140‑1 (MQ=255)

                                                                                                           tGACTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGc                         <  2:59254/140‑1 (MQ=255)

                                                                                                             aCTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAg                       >  2:202409/1‑140 (MQ=255)

                                                                                                             aCTTCATTGAGACGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAg                       >  1:1191844/1‑140 (MQ=255)

                                                                                                                        aCGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATgggg                          >  2:518396/1‑126 (MQ=255)

                                                                                                                         cGTAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAgg           <  2:829726/140‑1 (MQ=255)

                                                                                                                           tAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATgggg                          >  2:726720/1‑123 (MQ=255)

                                                                                                                           tAGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATgggg                          <  1:726720/123‑1 (MQ=255)

                                                                                                                            aGCCATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTa        >  2:690525/1‑140 (MQ=255)

                                                                                                                              ccATTTCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTAtt      <  2:1191844/140‑1 (MQ=255)

                                                                                                                                  ttCTGATGCCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTtctc  >  1:810228/1‑140 (MQ=255)

ACTCTCCAAACATCCGCGAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTC  >  NC_000913/1590384‑1590653

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`