BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,443,014	T→C	T362A (ACG→GCG)	secY ←	Sec translocon subunit SecY

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,443,014	0	T	C	100.0%	425.8 / NA	115	T362A (ACG→GCG)	secY	Sec translocon subunit SecY
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (61/54); total (61/54)

Only 100 of 120 total aligned reads displayed.

GAGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAA  >  NC_000913/3442884‑3443150

gAGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTcc                                                                                                                                 <  1:837802/140‑1 (MQ=255)

 aGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTccc                                                                                                                                >  1:659911/1‑140 (MQ=255)

    tCCCACCGAAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGa                                                                                                                             >  1:1041182/1‑140 (MQ=255)

      ccACCGAAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACg                                                                                                                           >  2:502291/1‑140 (MQ=255)

                  aaCGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTAc                                                                                                               >  1:460965/1‑140 (MQ=255)

                      gTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAAt                                                                                                           >  1:1039828/1‑140 (MQ=255)

                       tACTTTCATTGCATCGCGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGaa                                                                                                                         <  2:162264/125‑1 (MQ=255)

                       tACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGaa                                                                                                                         >  1:162264/1‑125 (MQ=255)

                       tACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAAtt                                                                                                                       >  2:362612/1‑127 (MQ=255)

                       tACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAAtt                                                                                                                       <  1:362612/127‑1 (MQ=255)

                       tACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTgg                                                                                                                  <  2:1120436/132‑1 (MQ=255)

                       tACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTgg                                                                                                                  >  1:1120436/1‑132 (MQ=255)

                       tACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATg                                                                                                          >  1:236831/1‑140 (MQ=255)

                       tACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATg                                                                                                          >  2:1008385/1‑140 (MQ=255)

                       tACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATg                                                                                                          >  2:722848/1‑140 (MQ=255)

                          tttCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCAc                                                                                                       <  2:625648/140‑1 (MQ=255)

                             cATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCgg                                                                                                    <  1:722848/140‑1 (MQ=255)

                              aTTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCTGGGTCAGGCGGGTCATTCCTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGa                                                                                                   <  2:1039828/140‑1 (MQ=255)

                              aTTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGa                                                                                                   <  2:137707/140‑1 (MQ=255)

                              aTTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGa                                                                                                   <  1:42323/140‑1 (MQ=255)

                              aTTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGa                                                                                                   <  2:236831/140‑1 (MQ=255)

                              aTTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGa                                                                                                   <  2:1020213/140‑1 (MQ=255)

                                 gCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGActt                                                                                                >  2:890102/1‑140 (MQ=255)

                                  cATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGActtc                                                                                               <  1:27304/140‑1 (MQ=255)

                                   aTCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGActtct                                                                                              >  2:835915/1‑140 (MQ=255)

                                   aTCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGActtct                                                                                              >  1:336134/1‑140 (MQ=255)

                                   aTCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGActtct                                                                                              >  1:638772/1‑140 (MQ=255)

                                    tCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGActtctt                                                                                             <  2:336134/140‑1 (MQ=255)

                                    tCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGActtctt                                                                                             <  2:638772/140‑1 (MQ=255)

                                    tCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGActtctt                                                                                             >  1:235183/1‑140 (MQ=255)

                                     cACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACttcttc                                                                                            >  2:109059/1‑140 (MQ=255)

                                      aCGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCa                                                                                           >  1:128447/1‑140 (MQ=255)

                                       cGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCgg                                                                                                    >  1:808628/1‑130 (MQ=255)

                                       cGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCgg                                                                                                    <  2:808628/130‑1 (MQ=255)

                                          aTGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGtt                                                                                       >  2:374148/1‑140 (MQ=255)

                                               cTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATctg                                                                                  <  2:548571/140‑1 (MQ=255)

                                                  cGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATctgctg                                                                               >  2:444728/1‑140 (MQ=255)

                                                         aGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCAcg                                                                        <  2:235183/140‑1 (MQ=255)

                                                         aGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCAcg                                                                        <  1:1008385/140‑1 (MQ=255)

                                                          ggCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCAcgc                                                                       >  1:571432/1‑140 (MQ=255)

                                                          ggCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCAcgc                                                                       >  1:79982/1‑140 (MQ=255)

                                                               aTAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGtt                                                                  >  2:388361/1‑140 (MQ=255)

                                                                         tataCAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAAc                                                        >  1:904088/1‑140 (MQ=255)

                                                                          ataCAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACg                                                       <  1:582040/140‑1 (MQ=255)

                                                                          ataCAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACg                                                       <  1:660832/140‑1 (MQ=255)

                                                                          ataCAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACg                                                       <  2:1687/140‑1 (MQ=255)

                                                                          ataCAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACg                                                       <  1:689257/140‑1 (MQ=255)

                                                                          ataCAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACg                                                       <  2:460965/140‑1 (MQ=255)

                                                                              aGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGcc                                                     >  1:1038318/1‑138 (MQ=255)

                                                                              aGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCgt                                                   <  1:374148/140‑1 (MQ=255)

                                                                              aGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGCTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGcc                                                     <  2:1038318/138‑1 (MQ=255)

                                                                               gcgcACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGcc                                                     >  2:758765/1‑137 (MQ=255)

                                                                               gcgcACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGcc                                                     <  1:758765/137‑1 (MQ=255)

                                                                               gcgcACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCgtg                                                  >  1:139159/1‑140 (MQ=255)

                                                                               gcgcACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCgtg                                                  >  1:410681/1‑140 (MQ=255)

                                                                               gcgcACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCgtg                                                  >  1:510607/1‑140 (MQ=255)

                                                                                  cACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTg                                                                 >  1:6452/1‑122 (MQ=255)

                                                                                  cACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTg                                                                 <  2:6452/122‑1 (MQ=255)

                                                                                  cACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTag                                               >  2:315551/1‑140 (MQ=255)

                                                                                   accaaccaGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCgt                                                   >  2:407888/1‑135 (MQ=255)

                                                                                   accaaccaGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCgt                                                   <  1:407888/135‑1 (MQ=255)

                                                                                     caaccaGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACg                                                       <  1:402363/129‑1 (MQ=255)

                                                                                     caaccaGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACg                                                       >  2:402363/1‑129 (MQ=255)

                                                                                     caaccaGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTagaag                                            >  2:672961/1‑140 (MQ=255)

                                                                                     caaccaGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCCGTTTCACGCGGGTTGAAAACCAACg                                                       <  2:512691/129‑1 (MQ=255)

                                                                                     caaccaGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCCGTTTCACGCGGGTTGAAAACCAACg                                                       >  1:512691/1‑129 (MQ=255)

                                                                                          aGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACa                                       >  1:816519/1‑140 (MQ=255)

                                                                                               cAGGCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACagaaga                                  >  1:334691/1‑140 (MQ=255)

                                                                                                 ggCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACagaagaag                                >  2:306612/1‑140 (MQ=255)

                                                                                                 ggCGGGTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACagaagaag                                <  2:571432/140‑1 (MQ=255)

                                                                                                 ggCGGGTAATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTaga                                              >  1:550117/1‑126 (MQ=255)

                                                                                                 ggCGGGTAATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTaga                                              <  2:550117/126‑1 (MQ=255)

                                                                                                     ggTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAgatga                            >  2:1053406/1‑140 (MQ=255)

                                                                                                      gTCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAgatgat                           <  1:1053406/140‑1 (MQ=255)

                                                                                                       tCATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGAtt                          >  1:197255/1‑140 (MQ=255)

                                                                                                        cATTACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTg                         <  1:407476/140‑1 (MQ=255)

                                                                                                          ttACTTCATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCa                       <  1:198677/140‑1 (MQ=255)

                                                                                                           tACTTTATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAg                      <  2:510607/140‑1 (MQ=255)

                                                                                                                tATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCa                       <  2:671532/134‑1 (MQ=255)

                                                                                                                tATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCa                       >  1:671532/1‑134 (MQ=255)

                                                                                                                tATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCa                 <  2:904088/140‑1 (MQ=255)

                                                                                                                tATCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCa                 <  2:659911/140‑1 (MQ=255)

                                                                                                                  tCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTg                         >  1:712287/1‑130 (MQ=255)

                                                                                                                  tCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTg                         <  2:712287/130‑1 (MQ=255)

                                                                                                                  tCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCa                 >  2:483717/1‑138 (MQ=255)

                                                                                                                  tCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCa                 <  1:483717/138‑1 (MQ=255)

                                                                                                                  tCGATATACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATa               <  1:490541/140‑1 (MQ=255)

                                                                                                                     atatACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATagag            >  2:128307/1‑140 (MQ=255)

                                                                                                                     atatACTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATagag            >  2:422618/1‑140 (MQ=255)

                                                                                                                        taCTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTaa         >  1:86583/1‑140 (MQ=255)

                                                                                                                          cTTCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAaca       <  2:86583/140‑1 (MQ=255)

                                                                                                                            tCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAAcaca     >  1:1155393/1‑140 (MQ=255)

                                                                                                                            tCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAAcaca     >  2:239241/1‑140 (MQ=255)

                                                                                                                            tCGCCGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAAcaca     >  2:160754/1‑140 (MQ=255)

                                                                                                                             cgccgcTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACAt    >  1:324402/1‑140 (MQ=255)

                                                                                                                             cgccgcTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACAt    >  1:77018/1‑140 (MQ=255)

                                                                                                                             cgccgcTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACAt    >  2:13772/1‑140 (MQ=255)

                                                                                                                             cgccgcTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACAt    >  1:502209/1‑140 (MQ=255)

                                                                                                                             cgccgcTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACAt    >  1:465110/1‑140 (MQ=255)

                                                                                                                               ccGCTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATaa  <  2:1155393/140‑1 (MQ=255)

GAGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAA  >  NC_000913/3442884‑3443150

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`