Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,287,902	C→T	P47S (CCG→TCG)	nrfA →	cytochrome c552 nitrite reductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,287,902	0	C	T	100.0%	290.2 / NA	82	P47S (CCG→TCG)	nrfA	cytochrome c552 nitrite reductase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (33/49);  total (33/49)

ACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCCCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTGATCCTGTGGGCGGGGTATCCCTTCTCGCGCGATTACAACAAG  >  NC_000913/4287767‑4288033                                                                                                                                        |                                                                                                                                    aCAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCgca                                                                                                                                 <  2:352324/140‑1 (MQ=255) aCAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCgca                                                                                                                                 <  2:127896/140‑1 (MQ=255)   aaGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCgcagc                                                                                                                               <  2:508588/140‑1 (MQ=255)    aGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCgcagca                                                                                                                              >  2:612356/1‑140 (MQ=255)      ggataaaaTAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATc                                                                                                                            >  1:528064/5‑140 (MQ=255)      gATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATc                                                                                                                            >  2:524904/1‑140 (MQ=255)       gataaaaTAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATcc                                                                                                                           <  2:528064/137‑1 (MQ=255)       aTAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATcc                                                                                                                           >  1:397899/1‑140 (MQ=255)         aaaaaTAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCg                                                                                                                         <  1:554917/140‑1 (MQ=255)            aaTAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATc                                                                                                                      <  1:419131/140‑1 (MQ=255)               aaaCGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAat                                                                                                                   <  1:506902/140‑1 (MQ=255)               aaaCGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAat                                                                                                                   <  1:322562/140‑1 (MQ=255)                 acgcacgcCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAatat                                                                                                                 >  2:187786/1‑140 (MQ=255)                 acgcacgcCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAatat                                                                                                                 <  1:568776/140‑1 (MQ=255)                      cgcCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAatat                                                                                                                 <  1:10621/135‑1 (MQ=255)                      cgcCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAatat                                                                                                                 >  2:10621/1‑135 (MQ=255)                       gcCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTcc                                                                                                           >  2:1068113/1‑140 (MQ=255)                           tATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTg                                                                                                         >  1:609644/1‑138 (MQ=255)                           tATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTg                                                                                                         <  2:609644/138‑1 (MQ=255)                             tCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGaaa                                                                                                     <  1:934528/140‑1 (MQ=255)                              cTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAg                                                                                                    <  1:534525/140‑1 (MQ=255)                               ttCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGc                                                                                                   <  2:101986/140‑1 (MQ=255)                                 cAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCa                                                                                                 >  2:723460/1‑140 (MQ=255)                                 cAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCa                                                                                                 >  2:791207/1‑140 (MQ=255)                                   gCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCAcc                                                                                               >  1:475607/1‑140 (MQ=255)                                   gCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCAcc                                                                                               <  2:576181/140‑1 (MQ=255)                                     ttATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTc                                                                                             >  1:885031/1‑140 (MQ=255)                                     ttATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTc                                                                                             >  2:272193/1‑140 (MQ=255)                                     ttATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTc                                                                                             <  2:397899/140‑1 (MQ=255)                                       aTTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCa                                                                                                 >  1:1041487/1‑134 (MQ=255)                                       aTTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCgg                                                                                           >  1:17658/1‑140 (MQ=255)                                       aTTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAAAGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCa                                                                                                 <  2:1041487/134‑1 (MQ=255)                                             tCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGt                                                                                     <  1:967704/140‑1 (MQ=255)                                             tCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTACTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGt                                                                                     >  2:1036465/1‑140 (MQ=255)                                              ccTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGaa                                                                                         <  2:29621/135‑1 (MQ=255)                                              ccTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGaa                                                                                         >  1:29621/1‑135 (MQ=255)                                              ccTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTc                                                                                    <  2:338056/140‑1 (MQ=255)                                              ccTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTc                                                                                    <  1:272193/140‑1 (MQ=255)                                               cTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCa                                                                                   <  1:187786/140‑1 (MQ=255)                                                 tttttctttttcACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCaga                                                                                 >  2:153292/1‑140 (MQ=255)                                                 tttttctttttcACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCaga                                                                                 >  2:354673/1‑140 (MQ=255)                                                    ttctttttcACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCg                                                                              <  2:786772/140‑1 (MQ=255)                                                        ttttcACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGtt                                                                          <  1:171994/140‑1 (MQ=255)                                                           tcACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGAc                                                                       <  1:723460/140‑1 (MQ=255)                                                            cACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACg                                                                      <  1:620960/140‑1 (MQ=255)                                                              cTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGcc                                                                    <  2:475607/140‑1 (MQ=255)                                                              cTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGcc                                                                    <  2:219103/140‑1 (MQ=255)                                                                    ttCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCg                                                              >  1:190377/1‑140 (MQ=255)                                                                    ttCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCg                                                              >  2:895487/1‑140 (MQ=255)                                                                         gCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGa                                                         >  2:663362/1‑140 (MQ=255)                                                                         gCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGa                                                         >  2:943084/1‑140 (MQ=255)                                                                            gAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATcc                                                      >  2:784579/1‑140 (MQ=255)                                                                            gAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATcc                                                      >  1:838685/1‑140 (MQ=255)                                                                             aaCAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCa                                                     <  1:391088/140‑1 (MQ=255)                                                                              aCAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCAc                                                    <  1:1036465/140‑1 (MQ=255)                                                                               cAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACg                                                   <  2:17658/140‑1 (MQ=255)                                                                               cAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACg                                                   <  1:612356/140‑1 (MQ=255)                                                                                      ctgctCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTg                                            <  2:584514/140‑1 (MQ=255)                                                                                      ctgctCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTg                                            <  1:943084/140‑1 (MQ=255)                                                                                       tgctCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTGa                                           >  2:139546/1‑140 (MQ=255)                                                                                       tgctCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTGa                                           >  1:567255/1‑140 (MQ=255)                                                                                       tgctCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTGa                                           >  2:749187/1‑140 (MQ=255)                                                                                        gctCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTGAt                                          >  1:769497/1‑140 (MQ=255)                                                                                           cccGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTGATCCt                                       <  2:8776/140‑1 (MQ=255)                                                                                            ccGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTGATCCtg                                      >  2:759793/1‑140 (MQ=255)                                                                                                aaaaCCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTGATCCTGTggg                                  <  1:1068113/140‑1 (MQ=255)                                                                                                aaaaCCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTGATCCTGTggg                                  <  1:670493/140‑1 (MQ=255)                                                                                                aaaaCCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTGATCCTGTggg                                  <  1:453356/140‑1 (MQ=255)                                                                                                aaaaCCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTGATCCTGTggg                                  <  1:259851/140‑1 (MQ=255)                                                                                                   aCCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTGATCCTGTGGGCgg                               <  2:190377/140‑1 (MQ=255)                                                                                                    ccTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTGATCCTGTGGGCggg                              <  1:152906/140‑1 (MQ=255)                                                                                                    ccTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTGATCCTGTGGGCggg                              <  1:334748/140‑1 (MQ=255)                                                                                                    ccTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTGATCCTGTGGGCggg                              >  2:334748/1‑140 (MQ=255)                                                                                                    ccTATAACTGTGGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTGATCCTGTGGGCggg                              <  1:663362/140‑1 (MQ=255)                                                                                                              tgGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTGATCCTGTGGGCGGGGTATCCCTtc                    >  1:919196/1‑140 (MQ=255)                                                                                                              tgGAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTGATCCTGTGGGCGGGGTATCCCTtc                    >  2:251335/1‑140 (MQ=255)                                                                                                               ggAAGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTGATCCTGTGGGCGGGGTATCCCTtct                   <  2:608595/140‑1 (MQ=255)                                                                                                                  aGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTGATCCTGTGGGCGGGGTATCCCTTCTcgc                <  2:1003513/140‑1 (MQ=255)                                                                                                                  aGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTGATCCTGTGGGCGGGGTATCCCTTCTcgc                <  1:354673/140‑1 (MQ=255)                                                                                                                  aGCGAAGAATGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTGATCCTGTGGGCGGGGTATCCCTTCTcgc                <  1:759793/140‑1 (MQ=255)                                                                                                                          aTGAAACCTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTGATCCTGTGGGCGGGGTATCCCTTCTCGCGCGATTac        <  1:482124/140‑1 (MQ=255)                                                                                                                                ccTTTGCCTCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTGATCCTGTGGGCGGGGTATCCCTTCTCGCGCGATTACAACAAg  <  1:524904/140‑1 (MQ=255)                                                                                                                                        |                                                                                                                                    ACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCCCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTGATCCTGTGGGCGGGGTATCCCTTCTCGCGCGATTACAACAAG  >  NC_000913/4287767‑4288033

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑