Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,039,599	T→C	T49A (ACG→GCG)	xerD ←	site‑specific recombinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,039,599	0	T	C	100.0%	221.8 / NA	61	T49A (ACG→GCG)	xerD	site‑specific recombinase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (25/36);  total (25/36)

TCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGTCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCACAGAGCATCAAGAAACTGCTCGATGCGTGCCAGATC  >  NC_000913/3039463‑3039734                                                                                                                                         |                                                                                                                                        tCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGcgccgccgc                                                                                                                                      >  2:791538/1‑140 (MQ=255) tCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGcgccgccgc                                                                                                                                      <  2:532067/140‑1 (MQ=255) tCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGcgccgccgc                                                                                                                                      >  1:345412/1‑140 (MQ=255) tCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGcgccgccgc                                                                                                                                      >  2:55756/1‑140 (MQ=255) tCTTCACGAAACTTTGCGCGATAAAGATACTGGAACAATCGGCGCATTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGcgccgccgc                                                                                                                                      >  2:34437/1‑140 (MQ=255)   ttCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCa                                                                                                                                    >  1:42297/1‑140 (MQ=255)          aaCTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCaa                                                                                                                             >  2:341463/1‑140 (MQ=255)            cTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAAcc                                                                                                                           <  1:21658/140‑1 (MQ=255)            cTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAAcc                                                                                                                           >  2:922068/1‑140 (MQ=255)            cTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAAcc                                                                                                                           <  1:922068/140‑1 (MQ=255)                tCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGCGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGTCAGCGTCAACCcgcg                                                                                                                       <  2:1089024/140‑1 (MQ=255)                tCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCcgcg                                                                                                                       <  2:749616/140‑1 (MQ=255)                tCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCcgcg                                                                                                                       <  2:42297/140‑1 (MQ=255)                tCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCcgcg                                                                                                                       <  2:1094941/140‑1 (MQ=255)                  gcgATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGt                                                                                                                     <  2:1082681/140‑1 (MQ=255)                  gcgATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCAGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGt                                                                                                                     <  2:724160/140‑1 (MQ=255)                     aTAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGAt                                                                                                                  <  2:134353/140‑1 (MQ=255)                         aGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCaa                                                                                                              <  1:822339/140‑1 (MQ=255)                          gATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAAc                                                                                                             <  2:460245/140‑1 (MQ=255)                             aCTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCAc                                                                                                          <  2:345412/140‑1 (MQ=255)                                ggAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTcc                                                                                                       >  2:790737/1‑140 (MQ=255)                                 gAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTcca                                                                                                      <  1:34437/140‑1 (MQ=255)                                 gAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTcca                                                                                                      <  1:341463/140‑1 (MQ=255)                                  aaCAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTccac                                                                                                     >  1:55218/1‑140 (MQ=255)                                  aaCAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTc                                                                                                        <  2:1088970/137‑1 (MQ=255)                                  aaCAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTc                                                                                                        >  1:1088970/1‑137 (MQ=255)                                   aCAATCGGCGCACTGCCCTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCCTCCCTTCGCGCCGCCGGCGGCGTCACCCCGCGGTGAGGCAACCGCTccacc                                                                                                    <  2:530416/140‑1 (MQ=255)                                   aCAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTccacc                                                                                                    <  2:31090/140‑1 (MQ=255)                                   aCAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTccacc                                                                                                    <  1:791538/140‑1 (MQ=255)                                   aCAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTccacc                                                                                                    <  2:55218/140‑1 (MQ=255)                                       tCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTcca                                                                                                      <  1:575656/134‑1 (MQ=255)                                       tCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTcca                                                                                                      >  2:575656/1‑134 (MQ=255)                                           cgcACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGa                                                                                            >  2:581141/1‑140 (MQ=255)                                               ctgcactCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGa                                                                                        >  2:829156/1‑140 (MQ=255)                                                tgcactCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTccacc                                                                                                    >  1:598257/1‑127 (MQ=255)                                                tgcactCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTccacc                                                                                                    <  2:598257/127‑1 (MQ=255)                                                 gcactCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCCGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCGTTGACAGATc                                                                                      >  1:750721/1‑140 (MQ=255)                                                   actCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTcca                                                                                                      >  2:1053729/1‑122 (MQ=255)                                                   actCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTcca                                                                                                      <  1:1053729/122‑1 (MQ=255)                                                        gCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACgg                                                                               <  1:970080/140‑1 (MQ=255)                                                             cgcgCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGc                                                                          <  2:564545/140‑1 (MQ=255)                                                              gcgcTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCg                                                                         <  1:479193/140‑1 (MQ=255)                                                                              tttATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAg                                                         >  1:708808/1‑140 (MQ=255)                                                                                        cccTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGAttttt                                               >  2:613273/1‑140 (MQ=255)                                                                                        cccTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGAttttt                                               >  1:383483/1‑140 (MQ=255)                                                                                                   ttCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCcaca                                    >  2:771948/1‑140 (MQ=255)                                                                                                   ttCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCcaca                                    >  1:356770/1‑140 (MQ=255)                                                                                                   ttCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCcaca                                    <  1:854307/140‑1 (MQ=255)                                                                                                   ttCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCcaca                                    >  1:961841/1‑140 (MQ=255)                                                                                                     cTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCACaga                                  >  1:326833/1‑140 (MQ=255)                                                                                                      tGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCACagag                                 <  2:383483/140‑1 (MQ=255)                                                                                                      tGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCACagag                                 <  1:771948/140‑1 (MQ=255)                                                                                                      tGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCACagag                                 <  1:613273/140‑1 (MQ=255)                                                                                                      tGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCACagag                                 <  1:55756/140‑1 (MQ=255)                                                                                                      tGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCACagag                                 <  2:708808/140‑1 (MQ=255)                                                                                                      tGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCACagag                                 <  1:217761/140‑1 (MQ=255)                                                                                                      tGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCACagag                                 <  2:326833/140‑1 (MQ=255)                                                                                                               tGCCTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCACAGAGCATCAAGaa                        >  2:386166/1‑140 (MQ=255)                                                                                                                gCCTGCAAATCGTCCCTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACCCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCACAGAGCATCAAGaaa                       <  2:817915/140‑1 (MQ=255)                                                                                                                 ccTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCACAGAGCATCAAGAAAc                      >  2:1057968/1‑140 (MQ=255)                                                                                                                  cTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCACAGAGCATCAAGAAACt                     >  2:936710/1‑140 (MQ=255)                                                                                                                  cTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCACAGAGCATCAAGAAACt                     >  2:651204/1‑140 (MQ=255)                                                                                                                  cTGCAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCACAGAGCATCAAGAAACt                     >  2:596038/1‑140 (MQ=255)                                                                                                                     cAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCACAGAGCATCAAGAAACTGCt                  <  1:829156/140‑1 (MQ=255)                                                                                                                     cAAATCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCACAGAGCATCAAGAAACTGCt                  <  1:1057968/140‑1 (MQ=255)                                                                                                                      aaaTCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCACAGAGCATCAAGAAACTGCTc                 >  2:369419/1‑140 (MQ=255)                                                                                                                         tCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCACAGAGCATCAAGAAACTGCTCGAt              <  2:356770/140‑1 (MQ=255)                                                                                                                         tCGTCACTTTGCGCCGCCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCACAGAGCATCAAGAAACTGCTCGAt              <  1:596038/140‑1 (MQ=255)                                                                                                                                    cgccgccgcCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCACAGAGCATCAAGAAACTGCTCGAt              <  2:331294/129‑1 (MQ=255)                                                                                                                                    cgccgccgcCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCACAGAGCATCAAGAAACTGCTCGAt              >  1:331294/1‑129 (MQ=255)                                                                                                                                    cgccgccgcCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCACAGAGCATCAAGAAACTGCTCGATGCGTGCCAGAt   >  2:712747/1‑140 (MQ=255)                                                                                                                                    cgccgccgcCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCACAGAGCATCAAGAAACTGCTCGATGCGTGCCAGAt   <  1:651204/140‑1 (MQ=255)                                                                                                                                     gccgccgccAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCACAGAGCATCAAGAAACTGCTCGATGCGTGCCAGATc  <  2:255763/140‑1 (MQ=255)                                                                                                                                         |                                                                                                                                        TCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCCGCCCTCCAGCCGTTCTGCCAGTAATGCCTGCAAATCGTCACTTTGCGCCGTCGCCAGCGTCAACCCGCGGTGATGCAACCACTCCACCATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCACAGAGCATCAAGAAACTGCTCGATGCGTGCCAGATC  >  NC_000913/3039463‑3039734

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑