BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,456,195	A→G	L206L (CTA→CTG)	gspC →	Type II secretion system protein GspC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,456,195	0	A	G	100.0%	348.4 / NA	95	L206L (CTA→CTG)	gspC	Type II secretion system protein GspC
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (53/42); total (53/42)

Only 100 of 102 total aligned reads displayed.

TCAAGCAGCCTGATTCAGAAAGTCAAAATGTACTCGCTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTACAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCAACGGCGTACCCCGCTTG  >  NC_000913/3456059‑3456330

tcaAGCAGCCTGATTCAGAAAGTCAAAATGTACTCGCTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCaa                                                                                                                                      >  2:853180/1‑140 (MQ=255)

 caAGCAGCCTGATTCAGAAAGTCAAAATGTACTCGCTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAAc                                                                                                                                     <  2:786893/140‑1 (MQ=255)

        ccTGATTCAGAAAGTCAAAATGTACTCGCTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAg                                                                                                                                  <  1:804618/136‑1 (MQ=255)

        ccTGATTCAGAAAGTCAAAATGTACTCGCTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAg                                                                                                                                  >  2:804618/1‑136 (MQ=255)

        ccTGATTCAGAAAGTCAAAATGTACTCGCTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGa                                                                                                                              >  1:935535/1‑140 (MQ=255)

        ccTGATTCAGAAAGTCAAAATGTACTCGCTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGa                                                                                                                              >  1:856039/1‑140 (MQ=255)

         cTGATTCAGAAAGTCAAAATGTACTCGCTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGat                                                                                                                             >  1:328640/1‑140 (MQ=255)

           gATTCAGAAAGTCAAAATGTACTCGCTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGatat                                                                                                                           <  2:484398/140‑1 (MQ=255)

           gATTCAGAAAGTCAAAATGTACTCGCTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGatat                                                                                                                           <  2:683716/140‑1 (MQ=255)

                  aaaGTCAAAATGTACTCGCTGATTATATTATCGCCACGCCTATACGTGATTGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATc                                                                                                                          <  1:621788/134‑1 (MQ=255)

                  aaaGTCAAAATGTACTCGCTGATTATATTATCGCCACGCCTATACGTGATTGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATc                                                                                                                          >  2:621788/1‑134 (MQ=255)

                  aaaGTCAAAATGTACTCGCTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTc                                                                                                                    >  1:820400/1‑140 (MQ=255)

                  aaaGTCAAAATGTACTCGCTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTc                                                                                                                    >  2:898026/1‑140 (MQ=255)

                   aaGTCAAAATGTACTCGCTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCa                                                                                                                   <  1:483206/140‑1 (MQ=255)

                    aGTCAAAATGTACTCGCTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAg                                                                                                                  <  1:65405/140‑1 (MQ=255)

                      tCAAAATGTACTCGCTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGcc                                                                                                                       <  1:1042062/133‑1 (MQ=255)

                      tCAAAATGTACTCGCTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGcc                                                                                                                       >  2:1042062/1‑133 (MQ=255)

                       cAAAATGTACTCGCTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGAt                                                                                                               <  2:611481/140‑1 (MQ=255)

                       cAAAATGTACTCGCTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGAt                                                                                                               >  1:623796/1‑140 (MQ=255)

                        aaaaTGCACTCGCTGATTCTATTATCGCCACGCCTATCCGTGATCGCGAACAGATCTACGGCCTTCGCTCGAACCCTCGTAAGGGCCTCAATGCATTTACCCCCAGCTTCCTGCAACCAGGGCATATCGCCCCCAGGCTc                                                                                                              >  2:845790/1‑140 (MQ=255)

                          aaTGTACTCGCTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCaa                                                                                                            <  2:328640/140‑1 (MQ=255)

                                   gCTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCa                                                                                                                   >  1:899758/1‑124 (MQ=255)

                                   gCTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCa                                                                                                                   <  2:899758/124‑1 (MQ=255)

                                    cTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCg                                                                                                  <  2:1043319/140‑1 (MQ=255)

                                    cTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCg                                                                                                  <  2:623796/140‑1 (MQ=255)

                                          atattatCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGacc                                                                                            <  2:820400/140‑1 (MQ=255)

                                           tattatCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGaccc                                                                                           <  2:856039/140‑1 (MQ=255)

                                            attatCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGaccca                                                                                          <  2:1050933/140‑1 (MQ=255)

                                            attatCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGaccca                                                                                          <  1:597568/140‑1 (MQ=255)

                                               atCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGacccaccc                                                                                       >  1:303541/1‑140 (MQ=255)

                                               atCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGacccaccc                                                                                       >  1:280714/1‑140 (MQ=255)

                                                 cGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGacc                                                                                            >  2:283873/1‑133 (MQ=255)

                                                 cGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGacc                                                                                            <  1:283873/133‑1 (MQ=255)

                                                 cGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCtg                                                                                     >  2:513261/1‑140 (MQ=255)

                                                 cGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCtg                                                                                     >  1:844411/1‑140 (MQ=255)

                                                  gCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGac                                                                                             >  2:1003364/1‑131 (MQ=255)

                                                  gCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGac                                                                                             <  1:1003364/131‑1 (MQ=255)

                                                   ccACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCtgat                                                                                   >  2:519416/1‑140 (MQ=255)

                                                   ccACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCtgat                                                                                   <  2:690660/140‑1 (MQ=255)

                                                     aCGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCtgatga                                                                                 >  1:165358/1‑140 (MQ=255)

                                                            taCGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTca                                                                          >  2:43142/1‑140 (MQ=255)

                                                                 gATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCtgat                                                                                   >  2:918698/1‑126 (MQ=255)

                                                                 gATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCtgat                                                                                   <  1:918698/126‑1 (MQ=255)

                                                                 gATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGc                                                                     >  2:945306/1‑140 (MQ=255)

                                                                  aTGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCa                                                                    >  2:974200/1‑140 (MQ=255)

                                                                   tGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCtga                                                                                    >  1:663206/1‑123 (MQ=255)

                                                                   tGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCtga                                                                                    <  2:663206/123‑1 (MQ=255)

                                                                   tGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCAt                                                                   >  1:485168/1‑140 (MQ=255)

                                                                    ggAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCAtt                                                                  <  1:519416/140‑1 (MQ=255)

                                                                      agaACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTcac                                                                         >  1:590064/1‑131 (MQ=255)

                                                                      agaACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTcac                                                                         <  2:590064/131‑1 (MQ=255)

                                                                        aaCAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGt                                                              >  1:452081/1‑140 (MQ=255)

                                                                               ataCGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGc                                                       <  1:845790/140‑1 (MQ=255)

                                                                               ataCGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGc                                                       <  2:889043/140‑1 (MQ=255)

                                                                                  cGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTaa                                                    >  1:982205/1‑140 (MQ=255)

                                                                                   gggTTTCGTTTG‑ACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACt                                                  <  1:1471/140‑1 (MQ=255)

                                                                                     gCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCAtt                                                                  >  1:367003/1‑123 (MQ=255)

                                                                                     gCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCAtt                                                                  <  2:367003/123‑1 (MQ=255)

                                                                                     gCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTc                                                 >  1:255438/1‑140 (MQ=255)

                                                                                     gCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTc                                                 >  2:615365/1‑140 (MQ=255)

                                                                                     gCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTc                                                 >  2:497567/1‑140 (MQ=255)

                                                                                       ttCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTcaa                                               >  2:435432/1‑140 (MQ=255)

                                                                                       ctCGATAGAACCCTCGTAAGGGCATCAATGCATTTACCACCAGCTTGCTGCAACCAGAGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACACACCCTGATGAGATTTCACAGGCATTAAGTTTACTGCTAACTcaa                                               >  2:515245/2‑140 (MQ=255)

                                                                                        tCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTa                                                     >  2:1000346/1‑133 (MQ=255)

                                                                                        tCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTa                                                     <  1:1000346/133‑1 (MQ=255)

                                                                                         cGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTcaaca                                             <  1:513261/140‑1 (MQ=255)

                                                                                                aCCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGTTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGTCCCCCCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCt                                      <  1:403508/140‑1 (MQ=255)

                                                                                                           ggCCTCAATGCATTTACCACCAGCTTGCTGCAACCA‑GGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAAtt                          >  1:293457/1‑140 (MQ=255)

                                                                                                            gCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAAtt                          >  1:982373/1‑140 (MQ=255)

                                                                                                            gCCTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAAtt                          >  2:169086/1‑140 (MQ=255)

                                                                                                              cTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATtcg                        >  1:134456/1‑140 (MQ=255)

                                                                                                              cTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATtcg                        >  1:328551/1‑140 (MQ=255)

                                                                                                              cTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATtcg                        >  2:726129/1‑140 (MQ=255)

                                                                                                              cTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATtcg                        >  2:686225/1‑140 (MQ=255)

                                                                                                              cTCAATGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATtcg                        >  1:48141/1‑140 (MQ=255)

                                                                                                                   tGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCa                   <  1:974200/140‑1 (MQ=255)

                                                                                                                   tGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCa                   <  2:566606/140‑1 (MQ=255)

                                                                                                                   tGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCa                   <  1:945306/140‑1 (MQ=255)

                                                                                                                   tGCATTTACCACCAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCa                   <  2:255438/140‑1 (MQ=255)

                                                                                                                          accaccAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCAACGGCGt            >  1:807876/1‑140 (MQ=255)

                                                                                                                          accaccAGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCAACGGCGt            <  1:686225/140‑1 (MQ=255)

                                                                                                                           ccaccaGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCAACGGCGTa           >  2:73893/1‑140 (MQ=255)

                                                                                                                            caccaGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCa                   >  1:747019/1‑131 (MQ=255)

                                                                                                                            caccaGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCa                   <  2:747019/131‑1 (MQ=255)

                                                                                                                               caGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCAACGGCGTAcccc       >  2:216658/1‑140 (MQ=255)

                                                                                                                               caGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCAACGGCGTAcccc       >  2:344635/1‑140 (MQ=255)

                                                                                                                                aGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCAACGGCGTACCCCg      <  1:615365/140‑1 (MQ=255)

                                                                                                                                aGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCAACGGCGTACCCCg      <  1:139573/140‑1 (MQ=255)

                                                                                                                                aGCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCAACGGCGTACCCCg      >  1:923525/1‑140 (MQ=255)

                                                                                                                                 gCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCAACGGCGTACCCCGc     <  2:48141/140‑1 (MQ=255)

                                                                                                                                 gCTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCAACGGCGTACCCCGc     >  1:1058318/1‑140 (MQ=255)

                                                                                                                                  cTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCAACGGCGTACCCCGCt    <  2:844411/140‑1 (MQ=255)

                                                                                                                                  cTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCAACGGCGTACCCCGCt    >  2:864623/1‑140 (MQ=255)

                                                                                                                                  cTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCAACGGCGTACCCCGCt    >  2:382803/1‑140 (MQ=255)

                                                                                                                                  cTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCAACGGCGTACCCCGCt    >  1:1073956/1‑140 (MQ=255)

                                                                                                                                  cTTGCTGCAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCAACGGCGTACCCCGCt    >  2:172088/1‑140 (MQ=255)

                                                                                                                                    tgctgcAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCAACGGCGTACCCCg      <  2:112720/136‑1 (MQ=255)

                                                                                                                                    tgctgcAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCAACGGCGTACCCCg      >  1:112720/1‑136 (MQ=255)

                                                                                                                                    tgctgcAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCAACGGCGTACCCCGCTTg  >  1:988056/1‑140 (MQ=255)

                                                                                                                                    tgctgcAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCAACGGCGTACCCCGCTTg  >  1:137277/1‑140 (MQ=255)

TCAAGCAGCCTGATTCAGAAAGTCAAAATGTACTCGCTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTACAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCAACGGCGTACCCCGCTTG  >  NC_000913/3456059‑3456330

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`