| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,905,639 | (A)9→10 | intergenic (‑42/+92) | bglF ← / ← bglG | beta‑glucoside specific PTS enzyme II/BglG kinase/BglG phosphatase/transcriptional antiterminator BglG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,905,630 | 1 | . | A | 96.2% | 273.4 / 2.2 | 80 | intergenic (‑33/+101) | bglF/bglG | beta‑glucoside specific PTS enzyme II/BglG kinase/BglG phosphatase/transcriptional antiterminator BglG |
| Reads supporting (aligned to +/- strand): ref base . (2/1); new base A (32/45); total (34/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.72e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
ATCCTTTAATTTAAAACGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCACGCGCTCTATATT > NC_000913/3905496‑3905760 | aTCCTTTAATTTAAAACGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑‑aaaaa > 2:1028225/1‑140 (MQ=255) ttaatttaaAACGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑‑aaaaaaaaaa > 1:413376/1‑139 (MQ=255) tAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACg > 1:322023/1‑140 (MQ=255) ttGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACg > 2:666970/1‑140 (MQ=255) aaTGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCAAAAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAAt < 1:557037/140‑1 (MQ=255) tGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCAAAAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCa > 1:65654/1‑140 (MQ=255) cAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAAt > 2:37175/1‑140 (MQ=255) cacaATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAAttttttt < 1:1028225/140‑1 (MQ=255) caATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCTCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCa > 1:624578/1‑140 (MQ=255) caATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCAAAAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTc > 1:834427/1‑140 (MQ=255) aaTGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGaa < 1:184493/122‑1 (MQ=255) aaTGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGaa > 2:184493/1‑122 (MQ=255) tATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGattt > 2:949284/1‑140 (MQ=255) aTCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAAt < 2:247170/125‑1 (MQ=255) aTCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAAt > 1:247170/1‑125 (MQ=255) gcgcCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCg > 2:357392/1‑140 (MQ=255) gcCCCCGGCTCCTGCCACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTTCCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCt < 1:990547/140‑1 (MQ=255) cccccGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCTCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCtt < 2:624578/140‑1 (MQ=255) cccccGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCtt > 2:337951/1‑140 (MQ=255) cccccGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCtt < 1:337951/140‑1 (MQ=255) cccccGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCtt > 1:138145/1‑140 (MQ=255) cccccGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCt > 1:254558/1‑138 (MQ=255) cccccGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCt < 2:254558/138‑1 (MQ=255) cccGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAg < 1:949284/140‑1 (MQ=255) cccGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAg < 1:465346/140‑1 (MQ=255) cGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTg < 2:864288/140‑1 (MQ=255) tGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACTGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAATGCGGTAAc > 1:686828/1‑140 (MQ=255) tGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAAc > 1:1014123/1‑140 (MQ=255) gCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACa < 2:322023/140‑1 (MQ=255) cGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACaa > 1:292948/1‑140 (MQ=255) cGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACa < 2:29199/139‑1 (MQ=255) cGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACa > 1:29199/1‑139 (MQ=255) aCTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATc > 2:877264/1‑140 (MQ=255) tATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTCCCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCt < 2:729310/140‑1 (MQ=255) aTTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCAAAAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCt < 2:65654/140‑1 (MQ=255) ttCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACt < 1:253001/140‑1 (MQ=255) ttCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACt < 2:396983/140‑1 (MQ=255) cTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCa < 2:138145/140‑1 (MQ=255) ggCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGTAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGt < 1:145422/140‑1 (MQ=255) ggCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGt < 2:554503/140‑1 (MQ=255) ggCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGt < 1:143880/140‑1 (MQ=255) tAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGtaat > 2:505638/1‑140 (MQ=255) cTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGGCGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCtt > 2:556807/1‑126 (MQ=255) cTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGGCGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCtt < 1:556807/126‑1 (MQ=255) cccGTCCTAACCTTCCCTCTACCCCCTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGGCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAataata < 2:231429/139‑1 (MQ=255) tCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATAttt > 1:390406/1‑140 (MQ=255) ttGCCCTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTc < 2:543707/140‑1 (MQ=255) gCCCTCTACCGCTTTGCGGCAAAACTCCAAAAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCt > 1:799155/1‑140 (MQ=255) cccTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCttt > 2:620404/1‑140 (MQ=255) cccTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCttt > 2:209794/1‑140 (MQ=255) cccTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCttt > 2:819905/1‑140 (MQ=255) cccTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCttt > 1:535848/1‑140 (MQ=255) cccTCTACCGCTTTGCGGCAAAACTCC‑‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTg > 1:21127/1‑140 (MQ=255) ccTCTACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTg < 1:819905/140‑1 (MQ=255) ctACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTgcgc < 1:404102/140‑1 (MQ=255) tACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCa < 1:1013446/140‑1 (MQ=255) tACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCa < 1:505638/140‑1 (MQ=255) tACCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCa < 1:877264/140‑1 (MQ=255) aCCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTGCTCAGTAATAATATTTCAGTGTTCTTTgcgccc < 1:557024/140‑3 (MQ=255) aCCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAc < 2:292948/140‑1 (MQ=255) aCCGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAc > 1:487089/1‑140 (MQ=255) ccGCTTTGCGGCAAAACTCCAAAAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAc < 2:819421/140‑1 (MQ=255) ccGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTGAAAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAc < 2:403232/140‑1 (MQ=255) ccGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcg < 2:313096/140‑1 (MQ=255) ccGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcg < 1:666970/140‑1 (MQ=255) ccGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcg < 1:761645/140‑1 (MQ=255) ccGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcg < 1:858289/140‑1 (MQ=255) ccGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcg < 2:487089/140‑1 (MQ=255) cGCTTTGCGGCAAAACTCCAAAAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcg < 2:49462/140‑1 (MQ=255) cGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcgc < 2:390894/140‑1 (MQ=255) cGCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcgc < 1:620404/140‑1 (MQ=255) cGCTTTGCGGCAAAACTCC‑‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAACAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcgcg < 2:21127/140‑1 (MQ=255) gCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcgcg < 2:1014123/140‑1 (MQ=255) gCTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcgcg < 1:209794/140‑1 (MQ=255) gCTTTGCGGAAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcgcg < 1:823528/140‑1 (MQ=255) cTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCACgcgc < 1:448760/140‑1 (MQ=255) cTTTGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCACgcgc > 1:1035145/1‑140 (MQ=255) tGCGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCACGCGctct > 2:377780/1‑140 (MQ=255) cGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcgcg > 2:244684/1‑134 (MQ=255) cGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCAcgcg < 1:244684/134‑1 (MQ=255) cGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCACGCGCTCtat > 2:722850/1‑140 (MQ=255) cGGCAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCACGCGCTCtat > 1:217602/1‑140 (MQ=255) cAAAACTCCA‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCACGCGCTCTATAtt > 1:318002/1‑140 (MQ=255) | ATCCTTTAATTTAAAACGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑‑AAAAAAAAACCTG‑AAAAAAACGGCCTGACGTGAATCAAGCAATTTTTTTCAGGTTTTGCCCGCTTAGTGCGGTAACAATCCTTTACTCAGTAATAATATTTCAGTGTTCTTTGCGCACGCGCTCTATATT > NC_000913/3905496‑3905760 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |