Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,409,506 C→T R78C (CGT→TGT)  rlmB → 23S rRNA 2'‑O‑ribose G2251 methyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,409,5060CT100.0% 235.8 / NA 66R78C (CGT→TGT) rlmB23S rRNA 2'‑O‑ribose G2251 methyltransferase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (33/33);  total (33/33)

TAAACGTCTGTTACCGCTGATTCACGCCCTTGAGTCTCAGGGCGTGGTTATCCAGTTGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGACGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCA  >  NC_000913/4409373‑4409639
                                                                                                                                     |                                                                                                                                     
tAAACGTCTGTTCCCGCTGATTCACGCCCTTGAGTCTCAGGGCGTGGTTATCCAGTTGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTACCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGt                                                                                                                                 <  2:721905/140‑1 (MQ=255)
      tCTGTTACCGCTGATTCACGCCCTTGAGTCTCAGGGCGTGGTTATCCAGTTGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAgg                                                                                                                           >  2:1045661/1‑140 (MQ=255)
      tCTGTTACCGCTGATTCACGCCCTTGAGTCTCAGGGCGTGGTTATCCAGTTGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAgg                                                                                                                           >  2:426285/1‑140 (MQ=255)
             ccGATGATTCCCGCCTTTGAGTCTCAGGGCGTGGTTACCCAGTTGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGa                                                                                                                    <  2:250388/140‑1 (MQ=255)
                 tGATTCACGCCCTTGAGTCTCAGGGCGTGGTTATCCAGTTGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTg                                                                                                                <  1:778076/140‑1 (MQ=255)
                  gATTCACGCCCTTGAGTCTCAGGGCGTGGTTATCCAGTTGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGc                                                                                                               >  2:933950/1‑140 (MQ=255)
                  aaTTCCCCCCTTTGAGTCTCAGGGCGTGTTTACCCATTTGGAAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGc                                                                                                               <  1:1043855/139‑1 (MQ=255)
                    ttCACGCCCTTGAGTCTCAGGGCGTGGTTATCCAGTTGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCg                                                                                                             >  2:530990/1‑140 (MQ=255)
                             ttGAGTCTCAGGGCGTGGTTATCCAGTTGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGAtc                                                                                                    >  1:223836/1‑140 (MQ=255)
                              tGAGTCTCAGGGCGTGGTTATCCAGTTGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGAtcg                                                                                                   <  1:201832/140‑1 (MQ=255)
                                    tcAGGGCGTGGTTATCCAGTTGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGAtcgcttcgc                                                                                             >  1:981905/1‑140 (MQ=255)
                                     cAGGGCGTGGTTATCCAGTTGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGAtcgcttcgct                                                                                            >  2:934385/1‑140 (MQ=255)
                                     cAGGGCGTGGCTATCCAGTTGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGAtcgcttcgct                                                                                            >  1:203725/1‑140 (MQ=255)
                                       gggCGTGGTTATCCAGTTGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGAtcgcttcgc                                                                                             >  1:133552/1‑137 (MQ=255)
                                       gggCGTGGTTATCCAGTTGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGAtcgcttcgc                                                                                             <  2:133552/137‑1 (MQ=255)
                                            tGGTTATCCAGTTGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTTTCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCaa                                                                                     >  1:509089/1‑140 (MQ=255)
                                            tGGTTATCCAGTTGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCaa                                                                                     >  1:634008/1‑140 (MQ=255)
                                            tGGTTATCCAGTTGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCaa                                                                                     >  1:1019217/1‑140 (MQ=255)
                                             ggTTATCCAGTTGGTAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAAc                                                                                    <  1:426285/140‑1 (MQ=255)
                                             ggTTATCCAGTTGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAAc                                                                                    >  2:519680/1‑140 (MQ=255)
                                              gTTATCCAGTTGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAAcc                                                                                   >  1:851659/1‑140 (MQ=255)
                                                tATCCAGTTGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGt                                                                                 <  1:934385/140‑1 (MQ=255)
                                                tATCCAGTTGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGt                                                                                 <  1:933950/140‑1 (MQ=255)
                                                 aTCCAGTTGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGtt                                                                                <  1:932112/140‑1 (MQ=255)
                                                      gTTGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCTCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCctgc                                                                           <  1:549401/140‑1 (MQ=255)
                                                       ttGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCctgct                                                                          >  2:342531/1‑140 (MQ=255)
                                                       ttGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCctgct                                                                          >  2:451354/1‑140 (MQ=255)
                                                         ggCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGa                                                                        >  1:956808/1‑140 (MQ=255)
                                                         ggCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGa                                                                        >  1:1007793/1‑140 (MQ=255)
                                                         ggCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGa                                                                        >  1:390341/1‑140 (MQ=255)
                                                              aCCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTc                                                                   <  1:1004637/140‑1 (MQ=255)
                                                                   cAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACgg                                                              <  2:981905/140‑1 (MQ=255)
                                                                   cAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACgg                                                              <  1:519680/140‑1 (MQ=255)
                                                                     atatCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCg                                                            <  2:1007793/140‑1 (MQ=255)
                                                                            gacgaGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCg                                                                  >  1:153737/1‑127 (MQ=255)
                                                                            gacgaGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCg                                                                  <  2:153737/127‑1 (MQ=255)
                                                                            gacgaGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGa                                                     <  1:342531/140‑1 (MQ=255)
                                                                             acgaGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGAt                                                    >  1:325762/1‑140 (MQ=255)
                                                                                agaAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCg                                                 >  2:477867/1‑140 (MQ=255)
                                                                                agaAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGACCCg                                                 >  2:238470/1‑140 (MQ=255)
                                                                                        gACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCt                                         <  2:325762/140‑1 (MQ=255)
                                                                                             tGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGgcg                                    <  1:530990/140‑1 (MQ=255)
                                                                                             tGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGgcg                                    <  2:851659/140‑1 (MQ=255)
                                                                                             tGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGgcg                                    <  1:1045661/140‑1 (MQ=255)
                                                                                             tGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGgcg                                    <  2:634008/140‑1 (MQ=255)
                                                                                                  tGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTTTCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGTACAACCTCGGCGCGTGc                               <  2:509089/140‑1 (MQ=255)
                                                                                                  tGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGc                               >  2:1045949/1‑140 (MQ=255)
                                                                                                    cATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTg                                >  2:46726/1‑137 (MQ=255)
                                                                                                    cATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTg                                <  1:46726/137‑1 (MQ=255)
                                                                                                    cATCAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCt                             <  2:223836/140‑1 (MQ=255)
                                                                                                       cAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCg                          >  2:498107/1‑140 (MQ=255)
                                                                                                       cAGGGCATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCg                          >  1:803142/1‑140 (MQ=255)
                                                                                                         gggCATTACCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTa                        <  2:479327/140‑1 (MQ=255)
                                                                                                         gggCATTACCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTa                        >  1:479327/1‑140 (MQ=255)
                                                                                                            cATTATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTAGTg                     >  1:743564/1‑140 (MQ=255)
                                                                                                              ttATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTAGTGCg                   <  2:324604/140‑1 (MQ=255)
                                                                                                               tATCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTAGTGCgg                  >  2:1032820/1‑140 (MQ=255)
                                                                                                                aTCGCCCGCGTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTAGTGCGGa                 <  2:743564/140‑1 (MQ=255)
                                                                                                                       gcgTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTAGTGCGGACGCcaca          >  1:485596/1‑140 (MQ=255)
                                                                                                                         gTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAgg        >  2:584733/1‑140 (MQ=255)
                                                                                                                         gTGAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAgg        <  2:1019217/140‑1 (MQ=255)
                                                                                                                           gAAGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCg      <  1:498107/140‑1 (MQ=255)
                                                                                                                            aaGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGt     >  2:377105/1‑140 (MQ=255)
                                                                                                                             aGCCAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGtt    <  1:793310/140‑1 (MQ=255)
                                                                                                                               ccAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCa  <  1:287403/140‑1 (MQ=255)
                                                                                                                               ccAGGATGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCa  <  1:1032820/140‑1 (MQ=255)
                                                                                                                                     |                                                                                                                                     
TAAACGTCTGTTACCGCTGATTCACGCCCTTGAGTCTCAGGGCGTGGTTATCCAGTTGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGACGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCA  >  NC_000913/4409373‑4409639

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: