Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,772,546	T→C	pseudogene (637/1016 nt)	yfjV ←	CP4‑57 prophage; putative arsenite transporter, N‑terminal fragment

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,772,546	0	T	C	100.0%	246.7 / NA	68	pseudogene (637/1016 nt)	yfjV	CP4‑57 prophage; putative arsenite transporter, N‑terminal fragment
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (32/36);  total (32/36)

GTCAATCGACAGCGCACCAATCAGCACCGTCGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGTACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATAACGATCTGCCATGGCGCACCGCGCAGGACTTTTCCGGTGTTGATCGAATGACCTCTTTTCGCCACCACA  >  NC_000913/2772410‑2772677                                                                                                                                         |                                                                                                                                    gTCAATCGACAGCGCACCAATCAGCACCGTCGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGTAGATTCAGCACGCCAGACAGGCACt                                                                                                                                  >  2:969622/1‑140 (MQ=255)  tCAATCGACAGCGCACCAATCAGCACCGTCGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTc                                                                                                                                 >  1:392384/1‑140 (MQ=255)     aTCGACAGCGCACCAATCAGCACCGTCGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGt                                                                                                                              <  1:1023787/140‑1 (MQ=255)     aTCGACAGCGCACCAATCAGCACCGTCGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGt                                                                                                                              <  1:2192/140‑1 (MQ=255)     aTCGACAGCGCACCAATCAGCACCGTCGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGt                                                                                                                              <  2:252228/140‑1 (MQ=255)         aCAGCGCACCAATCGGCACCGTCGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAAc                                                                                                                          >  2:700872/1‑140 (MQ=255)         aCAGCGCACCAATCAGCACCGTCGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAAc                                                                                                                          >  2:372027/1‑140 (MQ=255)            gcgcACCAATCAGCACCGTCGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCt                                                                                                                       >  1:1038654/1‑140 (MQ=255)             cgcACCAATCAGCACCGTCGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTg                                                                                                                      >  2:369616/1‑140 (MQ=255)               cACCAATCAGCACCGTCGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCa                                                                                                                    <  2:1038654/140‑1 (MQ=255)               cACCAATCAGCACCGTCGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCa                                                                                                                    >  1:678331/1‑140 (MQ=255)                    aTCAGCACCGTCGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTcc                                                                                                                                >  2:692717/1‑123 (MQ=255)                    aTCAGCACCGTCGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTcc                                                                                                                                <  1:692717/123‑1 (MQ=255)                    aTCAGCACCGTCGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTgcg                                                                                                               <  2:934065/140‑1 (MQ=255)                    aTCAGCACCGTCGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTgcg                                                                                                               >  1:683783/1‑140 (MQ=255)                         cACCGTCGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGc                                                                                                          >  1:376033/1‑140 (MQ=255)                          aCCGTCGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGcc                                                                                                         <  1:372027/140‑1 (MQ=255)                            cGTCGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCAt                                                                                                       >  2:971822/1‑140 (MQ=255)                              tCGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAg                                                                                                     >  2:38021/1‑140 (MQ=255)                              tCGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAg                                                                                                     >  2:698553/1‑140 (MQ=255)                              tCGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAg                                                                                                     >  2:68081/1‑140 (MQ=255)                              tCGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAg                                                                                                     >  1:820600/1‑140 (MQ=255)                               cGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAgg                                                                                                           <  2:871966/133‑1 (MQ=255)                               cGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAgg                                                                                                           >  1:871966/1‑133 (MQ=255)                               cGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGa                                                                                                    >  2:916584/1‑140 (MQ=255)                               cGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGa                                                                                                    <  1:73829/140‑1 (MQ=255)                               cGGCATATTGTTCATCACTGATGAGAGAAATGACGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAgg                                                                                                           >  1:39738/1‑133 (MQ=255)                               cGGCATATTGTTCATCACTGATGAGAGAAATGACGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAgg                                                                                                           <  2:39738/133‑1 (MQ=255)                                ggCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGTAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGAc                                                                                                   <  1:969622/140‑1 (MQ=255)                                ggCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGAc                                                                                                   <  1:698553/140‑1 (MQ=255)                                 gCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCa                                                                                                             <  1:614191/129‑1 (MQ=255)                                 gCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCa                                                                                                             >  2:614191/1‑129 (MQ=255)                                  cATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCa                                                                                                 <  2:391885/140‑1 (MQ=255)                                    tatTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACg                                                                                               <  2:820600/140‑1 (MQ=255)                                     atTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGa                                                                                              <  1:554392/140‑1 (MQ=255)                                       tGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATg                                                                                            >  1:813391/1‑140 (MQ=255)                                        gTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGt                                                                                           >  2:736515/1‑140 (MQ=255)                                          tcatcaCTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTAc                                                                                         >  1:332228/1‑140 (MQ=255)                                              caCTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGc                                                                                     <  2:78671/140‑1 (MQ=255)                                                 tgatgaGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCa                                                                                  >  2:78117/1‑140 (MQ=255)                                                   atgaGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCAc                                                                                                >  1:541099/1‑124 (MQ=255)                                                   atgaGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCAc                                                                                                <  2:541099/124‑1 (MQ=255)                                                        agaAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGaa                                                                           >  2:189756/1‑140 (MQ=255)                                                             tGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATaa                                                                      >  2:915559/1‑140 (MQ=255)                                                               ccGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATAACg                                                                    <  1:369616/140‑1 (MQ=255)                                                               ccGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATAACg                                                                    <  2:813391/140‑1 (MQ=255)                                                                 gTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATAACGAt                                                                  <  2:951831/140‑1 (MQ=255)                                                                 gTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATAACGAt                                                                  <  1:700872/140‑1 (MQ=255)                                                                  tCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATAACGATc                                                                 <  2:782111/140‑1 (MQ=255)                                                                    aagaagCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATAACGATCTg                                                               >  2:548197/1‑140 (MQ=255)                                                                    aagaagCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATAACGATCTg                                                               <  1:835727/140‑1 (MQ=255)                                                                                   aaCGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATAACGATCTGCCATGGCGCACcgcg                                                <  1:877818/140‑1 (MQ=255)                                                                                         gCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATAACGATCTGCCATGGCGCACCGCGCAGGAc                                          <  1:38021/140‑1 (MQ=255)                                                                                         gCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATAACGATCTGCCATGGCGCACCGCGCAGGAc                                          <  1:548197/140‑1 (MQ=255)                                                                                                   aCCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATAACGATCTGCCATGGCGCACCGCGCAGGACTTTTCCGgtg                                <  1:736515/140‑1 (MQ=255)                                                                                                        ttGTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATAACGATCTGCCATGGCGCACCGCGCAGGACTTTTCCGGTGTTGAt                           <  1:78117/140‑1 (MQ=255)                                                                                                          gTCTGCCAGCAGATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATAACGATCTGCCATGGCGCACCGCGCAGGACTTTTCCGGTGTTGATCg                         >  1:29807/1‑140 (MQ=255)                                                                                                                  gcagATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATAACGATCTGCCATGGCGCACCGCGCAGGACTTTTCCGGTGTTGATCGAATGAc                   <  2:55585/138‑1 (MQ=255)                                                                                                                  gcagATTCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATAACGATCTGCCATGGCGCACCGCGCAGGACTTTTCCGGTGTTGATCGAATGAc                   >  1:55585/1‑138 (MQ=255)                                                                                                                       ttCAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATAACGATCTGCCATGGCGCACCGCGCAGGACTTTTCCGGTGTTGATCGAATGACCTCtttt            <  2:376033/140‑1 (MQ=255)                                                                                                                         cAGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATAACGATCTGCCATGGCGCACCGCGCAGGACTTTTCCGGTGTTGATCGAATGACCTCTTTTCg          <  1:187417/140‑1 (MQ=255)                                                                                                                          aGCACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATAACGATCTGCCATGGCGCACCGCGCAGGACTTTTCCGGTGTTGATCGAATGACCTCTTTTCGc         <  2:332228/140‑1 (MQ=255)                                                                                                                            cACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATAACGATCTGCCATGGCGCACCGCGCAGGACTTTTCCGGTGTTGATCGAATGACCTCTTTTCGcca       >  2:614830/1‑140 (MQ=255)                                                                                                                            cACGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATAACGATCTGCCATGGCGCACCGCGCAGGACTTTTCCGGTGTTGATCGAATGACCTCTTTTCGcca       >  2:36829/1‑140 (MQ=255)                                                                                                                              cGCCAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCGCGATGTACATGCCCAGTGAGAAAATAACGATCTGCCATGGCGCACCGCGCAGGACTTGTCCGGTGTTGATCGAATGACCTCTTTTCGccacc     <  2:931205/140‑1 (MQ=255)                                                                                                                                 cAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATAACGATCTGCCATGGCGCACCGCGCAGGACTTTTCCGGTGTTGATCGAATGACCTCTTTTCg          <  2:578525/132‑1 (MQ=255)                                                                                                                                 cAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATAACGATCTGCCATGGCGCACCGCGCAGGACTTTTCCGGTGTTGATCGAATGACCTCTTTTCg          >  1:578525/1‑132 (MQ=255)                                                                                                                                 cAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATAACGATCTGCCATGGCGCACCGCGCAGGACTTTTCCGGTGTTGATCGAATGACCTCTTTTCGCCACcaca  <  1:68081/140‑1 (MQ=255)                                                                                                                                 cAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATAACGATCTGCCATGGCGCACCGCGCAGGACTTTTCCGGTGTTGATCGAATGACCTCTTTTCGCCACcaca  >  2:491494/1‑140 (MQ=255)                                                                                                                                 cAGACAGGCACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATAACGATCTGCCATGGCGCACCGCGCAGGACTTTTCCGGTGTTGATCGAATGACCTCTTTTCGCCACcaca  <  2:392384/140‑1 (MQ=255)                                                                                                                                         |                                                                                                                                    GTCAATCGACAGCGCACCAATCAGCACCGTCGGCATATTGTTCATCACTGATGAGAGAAATGCCGTCAAGAAGCCGGTGCCGAACGTCGCTGCCCATAACCCCTTGTCTGCCAGCAGATTCAGCACGCCAGACAGGTACTCCGTGAACCCTGCATTGCGCAGGCCATAGACCACGATGTACATGCCCAGTGAGAAAATAACGATCTGCCATGGCGCACCGCGCAGGACTTTTCCGGTGTTGATCGAATGACCTCTTTTCGCCACCACA  >  NC_000913/2772410‑2772677

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑