Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	607,587	(A)7→8	intergenic (‑204/‑147)	ybdK ← / → sokE	carboxylate‑amine ligase/small RNA SokE

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	607,580	1	.	A	100.0%	221.6 / NA	62	intergenic (‑197/‑154)	ybdK/sokE	carboxylate‑amine ligase/small RNA SokE
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base A (29/33);  total (29/33)

GAAGTTCTGGAATGTTTCTTTTTTTTGGTGATGGTGAACTGATGGTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAG‑‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCGGGTGCCTGAAGCTTTCCGGTTT  >  NC_000913/607447‑607711                                                                                                                                       |                                                                                                                                     gAAGTTCTGGAATGTTTCTTTTTTTTGGTGATGGTGAACTGATGGTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAG‑‑aaaaaa                                                                                                                               >  1:2307/1‑140 (MQ=255)    gTTCTGGAATGTTTCTTTTTTTTGGTGATGGTGAACTGATGGTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAG‑‑aaaaaaaac                                                                                                                            <  1:49456/140‑3 (MQ=255)         ggAATGTTTCTTTTTTTTGGTGATGGTGAACTGATGGTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAG‑‑aaaaaaaaacgggt                                                                                                                       <  1:527397/140‑8 (MQ=255)            aTGTTTCTTTTTTTTGGTGATGGTGAACTGATGGTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAg                                                                                                                     >  1:259603/1‑140 (MQ=255)               tttCTTTTTTTTGGTGATGGTGAACTGATGGTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCtt                                                                                                                  >  1:878328/1‑140 (MQ=255)               tttCTTTTTTTTGGTGATGGTGAACTGATGGTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCtt                                                                                                                  >  1:589522/1‑140 (MQ=255)               tttCTTTTTTTTGGTGATGGTGAACTGATGGTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCtt                                                                                                                  >  1:538771/1‑140 (MQ=255)                   ttttttttGGTGATGGTGAACTGATGGTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGCTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGt                                                                                                              <  1:570257/140‑1 (MQ=255)                       ttttGGTGATGGTGAACTGATGGTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGAt                                                                                                          <  1:540419/140‑1 (MQ=255)                            gtgatggtgaACTGATGGTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTaatg                                                                                                     <  2:589522/140‑3 (MQ=255)                            gtgatggtgaACTGATGGTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAAt                                                                                                     <  2:538771/140‑1 (MQ=255)                                      aCTGATGGTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTgag                                                                                           <  2:622017/140‑1 (MQ=255)                                         gATGGTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAg                                                                                        >  2:360456/1‑140 (MQ=255)                                          aTGGTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGt                                                                                       >  1:317173/1‑140 (MQ=255)                                          aTGGTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGt                                                                                       >  2:693962/1‑140 (MQ=255)                                          aTGGTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGt                                                                                       >  1:1027174/1‑140 (MQ=255)                                          aTGGTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTAGGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGt                                                                                       >  1:973321/1‑140 (MQ=255)                                           tGGTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTc                                                                                      <  2:737470/140‑1 (MQ=255)                                           tGGTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTc                                                                                      >  2:575246/1‑140 (MQ=255)                                            ggTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTcc                                                                                     >  2:1020954/1‑140 (MQ=255)                                               gCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGaa                                                                                  >  2:596779/1‑140 (MQ=255)                                               gCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGaa                                                                                  <  2:1027174/140‑1 (MQ=255)                                                 cTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAAc                                                                                <  1:799754/140‑1 (MQ=255)                                                 cTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAAc                                                                                >  1:559682/1‑140 (MQ=255)                                                 cTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAAc                                                                                <  1:511113/140‑1 (MQ=255)                                                    aaGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTc                                                                                      <  1:588827/131‑1 (MQ=255)                                                    aaGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTc                                                                                      >  2:588827/1‑131 (MQ=255)                                                    aaGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAgg                                                                             >  2:765982/1‑140 (MQ=255)                                                    aaGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAgg                                                                             <  2:341738/140‑1 (MQ=255)                                                     aGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGa                                                                            <  1:1020954/140‑1 (MQ=255)                                                     aGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGa                                                                            <  2:43482/140‑1 (MQ=255)                                                     aGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGa                                                                            <  2:224836/140‑1 (MQ=255)                                                     aGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGa                                                                            <  1:353271/140‑1 (MQ=255)                                                     aGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGa                                                                            <  2:878328/140‑1 (MQ=255)                                                       cAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGGGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACt                                                                          <  1:788598/140‑1 (MQ=255)                                                       cAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACt                                                                          <  2:271564/140‑1 (MQ=255)                                                         aTTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCa                                                                        <  1:701160/140‑1 (MQ=255)                                                         aTTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCa                                                                        <  2:711090/140‑1 (MQ=255)                                                          tttGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCAc                                                                       >  1:859467/1‑140 (MQ=255)                                                            tGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTg                                                                     <  1:667923/140‑1 (MQ=255)                                                            tGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGAGTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCGGAAACAGGACTCACTg                                                                     <  2:270074/140‑1 (MQ=255)                                                                  cTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGAAAAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTataa                                                                >  1:905825/1‑140 (MQ=255)                                                                             tgACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTg                                                                     <  2:6013/123‑1 (MQ=255)                                                                             tgACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTg                                                                     >  1:6013/1‑123 (MQ=255)                                                                             tgACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTAt                                                    >  1:1023545/1‑140 (MQ=255)                                                                                     tATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGa                                            <  1:360456/140‑1 (MQ=255)                                                                                       tGGCAGTGCTTGCTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGATCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGCCCGAAACAGGACCCACTGTATAAATAAACAGCTATTTTGTTGAgg                                          >  2:914262/1‑140 (MQ=255)                                                                                       tGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAgg                                          <  2:689678/140‑1 (MQ=255)                                                                                       gggCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAgg                                          <  2:973321/139‑1 (MQ=255)                                                                                        ggCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGa                                         <  2:905587/140‑1 (MQ=255)                                                                                            gTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAggg                                     <  1:765982/140‑1 (MQ=255)                                                                                             tGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGt                                    >  2:193111/1‑140 (MQ=255)                                                                                             tGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGt                                    >  1:891886/1‑140 (MQ=255)                                                                                             tGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGt                                    >  1:855405/1‑140 (MQ=255)                                                                                             tGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGt                                    >  2:366972/1‑140 (MQ=255)                                                                                             tGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGt                                    >  1:998570/1‑140 (MQ=255)                                                                                              gCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTa                                   >  1:447507/1‑140 (MQ=255)                                                                                              gCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGCTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTa                                   >  1:679389/1‑140 (MQ=255)                                                                                                       tggCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAggg                                     >  1:1068309/1‑129 (MQ=255)                                                                                                       tggCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAggg                                     <  2:1068309/129‑1 (MQ=255)                                                                                                       tggCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAAcgg                          >  2:135313/1‑140 (MQ=255)                                                                                                         gCGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAAcggcg                        >  2:840827/1‑140 (MQ=255)                                                                                                          cGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAAcggcgg                       <  1:596779/140‑1 (MQ=255)                                                                                                          cGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAAcggcgg                       <  1:366972/140‑1 (MQ=255)                                                                                                          cGAAGAATTTTGACGATTGAGTCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAAcggcgg                       <  2:861981/140‑1 (MQ=255)                                                                                                                               tCATGCAGA‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCGGGTGCCTGAAGCTTTCCGGttt  <  1:897816/140‑1 (MQ=255)                                                                                                                                       |                                                                                                                                     GAAGTTCTGGAATGTTTCTTTTTTTTGGTGATGGTGAACTGATGGTGCCTGAAGCAATTTGGCTACTTTTGCAATGTGACAAGTTATGGCAGTGCTGACTGGTGGCGAAGAATTTTGACGATTGAGTCATGCAG‑‑AAAAAAACGGGTTCAGCTTCAGTTGATTAAATGAGGAGTGAGAAGTCCGAAACAGGACTCACTGTATAAATAAACAGCTATTTTGTTGAGGAAGGGTAAGATAACGGCGGGTGCCTGAAGCTTTCCGGTTT  >  NC_000913/607447‑607711

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑