BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,541,444	A→G	D163G (GAT→GGT)	fimB →	regulator for fimA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,541,444	0	A	G	100.0%	488.4 / NA	132	D163G (GAT→GGT)	fimB	regulator for fimA
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (56/76); total (56/76)

Only 100 of 133 total aligned reads displayed.

GCAACAGTTTTACCATATTATCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATAGTTGAGATACCAGGGA  >  NC_000913/4541310‑4541580

     aGTTTTACCATATTATCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTggg                                                                                                                                <  1:595639/140‑1 (MQ=255)

         ttACCATATTATCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATc                                                                                                                            >  1:500756/1‑140 (MQ=255)

            ccATATTATCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCa                                                                                                                         <  2:300019/140‑1 (MQ=255)

              atatTATCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAat                                                                                                                       <  2:175039/140‑1 (MQ=255)

              atatTATCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAat                                                                                                                       <  1:412347/140‑1 (MQ=255)

               tattatCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAata                                                                                                                      >  2:663795/1‑140 (MQ=255)

               tattatCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAata                                                                                                                      >  2:71392/1‑140 (MQ=255)

                attatCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAatat                                                                                                                     <  2:595191/140‑1 (MQ=255)

                 ttatCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCg                                                                                                                           >  1:385016/1‑133 (MQ=255)

                 ttatCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCg                                                                                                                           <  2:385016/133‑1 (MQ=255)

                    tctcGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAat                                                                                                                       <  2:244154/134‑1 (MQ=255)

                    tctcGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAat                                                                                                                       >  1:244154/1‑134 (MQ=255)

                      tcGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCa                                                                                                               <  1:554366/140‑1 (MQ=255)

                      tcGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCa                                                                                                               <  2:648705/140‑1 (MQ=255)

                      tcGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCa                                                                                                               >  1:28307/1‑140 (MQ=255)

                       cGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCAt                                                                                                              >  1:784362/1‑140 (MQ=255)

                        gACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATATGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATa                                                                                                             <  2:134859/140‑1 (MQ=255)

                        gACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATa                                                                                                             <  1:757169/140‑1 (MQ=255)

                        gACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATa                                                                                                             <  1:929395/140‑1 (MQ=255)

                         aCTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATAc                                                                                                            >  2:643081/1‑140 (MQ=255)

                         aCTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATAc                                                                                                            >  2:108536/1‑140 (MQ=255)

                          cTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAat                                                                                                                       <  1:751860/128‑1 (MQ=255)

                          cTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACt                                                                                                           <  2:784362/140‑1 (MQ=255)

                          cTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACt                                                                                                           <  2:841421/140‑1 (MQ=255)

                          cTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACt                                                                                                           <  1:71392/140‑1 (MQ=255)

                           ttCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTg                                                                                                          >  1:1052505/1‑140 (MQ=255)

                             ccGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTc                                                                                                        >  1:936182/1‑140 (MQ=255)

                                 tggtAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGt                                                                                                    <  1:1019040/140‑1 (MQ=255)

                                 tggtAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGt                                                                                                    <  1:671511/140‑1 (MQ=255)

                                  ggtAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGta                                                                                                   <  2:152477/140‑1 (MQ=255)

                                      aTGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATAcc                                                                                               >  2:238014/1‑140 (MQ=255)

                                      aTGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATAcc                                                                                               <  2:684065/140‑1 (MQ=255)

                                      aTGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATAcc                                                                                               <  2:396593/140‑1 (MQ=255)

                                        gCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATAcc                                                                                               >  2:1026757/1‑138 (MQ=255)

                                             gTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGt                                                                                                    <  1:1015244/128‑1 (MQ=255)

                                             gTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCa                                                                                        >  1:1002740/1‑140 (MQ=255)

                                             gTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCa                                                                                        >  2:176046/1‑140 (MQ=255)

                                                 tCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGc                                                                                    >  1:24542/1‑140 (MQ=255)

                                                       gagaTTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCg                                                                              >  2:42824/1‑140 (MQ=255)

                                                       gagaTTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCg                                                                              >  2:892831/1‑140 (MQ=255)

                                                       gagaTTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCg                                                                              <  2:778690/140‑1 (MQ=255)

                                                              aTCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTAc                                                                       >  2:149205/1‑140 (MQ=255)

                                                               tCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACg                                                                      >  2:1005851/1‑140 (MQ=255)

                                                               tCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACg                                                                      <  2:101977/140‑1 (MQ=255)

                                                               tCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACg                                                                      <  2:883194/140‑1 (MQ=255)

                                                               tCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACg                                                                      <  2:297138/140‑1 (MQ=255)

                                                               tCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACg                                                                      <  1:720598/140‑1 (MQ=255)

                                                               tCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACg                                                                      <  1:169868/140‑1 (MQ=255)

                                                               tCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACg                                                                      <  1:176046/140‑1 (MQ=255)

                                                               tCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACg                                                                      <  2:726649/140‑1 (MQ=255)

                                                                   cacaTGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCAt                                                                  >  2:823058/1‑140 (MQ=255)

                                                                   cacaTGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCAt                                                                  <  1:1005851/140‑1 (MQ=255)

                                                                    acaTGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATc                                                                 <  2:1002740/140‑1 (MQ=255)

                                                                     taTGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGGGTCTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCt                                                                <  2:500756/139‑1 (MQ=255)

                                                                     caTGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCt                                                                <  2:113101/140‑1 (MQ=255)

                                                                      aTGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTg                                                               >  2:200328/1‑140 (MQ=255)

                                                                         ttACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGa                                                            <  1:242820/140‑1 (MQ=255)

                                                                              ccATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATagag                                                       >  1:64599/1‑140 (MQ=255)

                                                                               cATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGc                                                      <  2:398870/140‑1 (MQ=255)

                                                                                aTTCGTGTGGTTTTGCTTTGGCCAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGcc                                                     >  1:870828/1‑140 (MQ=255)

                                                                                 ttCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGc                                                                    <  1:639770/124‑1 (MQ=255)

                                                                                 ttCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCa                                                    >  2:600967/1‑140 (MQ=255)

                                                                                 ttCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCa                                                    >  1:1028301/1‑140 (MQ=255)

                                                                                  tCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATa                                                          <  2:801263/133‑1 (MQ=255)

                                                                                  tCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATa                                                          >  1:801263/1‑133 (MQ=255)

                                                                                  tCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCag                                                   >  2:212568/1‑140 (MQ=255)

                                                                                  tCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCag                                                   >  1:933132/1‑140 (MQ=255)

                                                                                         gTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGgacga                                            >  1:349979/1‑140 (MQ=255)

                                                                                              gCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCg                                       <  2:1052505/140‑1 (MQ=255)

                                                                                                   ggCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACg                                  <  2:349979/140‑1 (MQ=255)

                                                                                                   ggCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACg                                  <  1:326599/140‑1 (MQ=255)

                                                                                                   ggCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACg                                  <  1:799412/140‑1 (MQ=255)

                                                                                                   ggCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACg                                  <  2:24542/140‑1 (MQ=255)

                                                                                                   ggCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACg                                  <  2:399131/140‑1 (MQ=255)

                                                                                                   ggCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACg                                  >  1:926569/1‑140 (MQ=255)

                                                                                                   ggCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACg                                  >  1:367693/1‑140 (MQ=255)

                                                                                                   ggCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACg                                  <  1:855658/140‑1 (MQ=255)

                                                                                                   ggCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACg                                  <  2:186807/140‑1 (MQ=255)

                                                                                                    gCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGc                                 >  2:825034/1‑140 (MQ=255)

                                                                                                    gCGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGc                                 >  1:440981/1‑140 (MQ=255)

                                                                                                     cGAATATGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCt                                <  1:212568/140‑1 (MQ=255)

                                                                                                         tatGGGAATAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGttt                            <  1:815705/140‑1 (MQ=255)

                                                                                                                aTAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATagag                     <  2:440981/140‑1 (MQ=255)

                                                                                                                 tAGATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAgaga                    <  2:926569/140‑1 (MQ=255)

                                                                                                                   gATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCa                                    >  2:585961/1‑122 (MQ=255)

                                                                                                                   gATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCa                                    <  1:585961/122‑1 (MQ=255)

                                                                                                                   gATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATa                  >  1:197392/1‑140 (MQ=255)

                                                                                                                   gATACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATa                  <  2:1028301/140‑1 (MQ=255)

                                                                                                                    aTACGCGACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATAg                 >  1:1063356/1‑140 (MQ=255)

                                                                                                                        gcgACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATAGTTga             <  1:199798/140‑1 (MQ=255)

                                                                                                                        gcgACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATAGTTga             <  1:42824/140‑1 (MQ=255)

                                                                                                                        gcgACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATAGTTga             <  1:149205/140‑1 (MQ=255)

                                                                                                                         cgACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAgaga                    <  2:935400/132‑1 (MQ=255)

                                                                                                                         cgACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATAGTTgag            <  2:367693/140‑1 (MQ=255)

                                                                                                                         cgACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATAGTTgag            <  1:767233/140‑1 (MQ=255)

                                                                                                                         cgACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATAGTTgag            <  2:870828/140‑1 (MQ=255)

                                                                                                                         cgACTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATAGTTgag            <  2:246037/140‑1 (MQ=255)

                                                                                                                           aCTTATCCAGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATAGTTGAGAt          <  1:328125/140‑1 (MQ=255)

                                                                                                                                   aGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATAGTTGAGATACCAGGGa  <  2:28307/140‑1 (MQ=255)

                                                                                                                                   aGGGTTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATAGTTGAGATACCAGGGa  <  2:933132/140‑1 (MQ=255)

GCAACAGTTTTACCATATTATCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATAGTTGAGATACCAGGGA  >  NC_000913/4541310‑4541580

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`