BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,147,109	T→C	Y106H (TAT→CAT)	yceD →	DUF177 domain‑containing protein YceD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,147,109	0	T	C	100.0%	375.3 / NA	100	Y106H (TAT→CAT)	yceD	DUF177 domain‑containing protein YceD
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (44/56); total (44/56)

Only 100 of 101 total aligned reads displayed.

AAACGGCGATGCGAAGGTGACGGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGTATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCATGATTCTGAACACTGTGAAGTGTCCGAAGCGGACATGGT  >  NC_000913/1146976‑1147242

aaaCGGCGATGCGAAGGTGACGGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAAc                                                                                                                                 <  1:439767/140‑1 (MQ=255)

    ggCGATGCGAAGGTGACGGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGAt                                                                                                                             <  2:70688/140‑1 (MQ=255)

      cGATGCGAAGGTGACGGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTg                                                                                                                           <  2:647069/140‑1 (MQ=255)

        aTGCGAAGGTGACGGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGa                                                                                                                                   >  2:410914/1‑130 (MQ=255)

        aTGCGAAGGTGACGGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGa                                                                                                                                   <  1:410914/130‑1 (MQ=255)

        aTGCGAAGGTGACGGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGAt                                                                                                                             >  2:189432/1‑136 (MQ=255)

        aTGCGAAGGTGACGGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGAt                                                                                                                             <  1:189432/136‑1 (MQ=255)

        aTGCGAAGGTGACGGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAg                                                                                                                         >  1:537421/1‑140 (MQ=255)

        aTGCGAAGGTGACGGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAg                                                                                                                         >  1:638114/1‑140 (MQ=255)

        aTGCGAAGGTGACGGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAg                                                                                                                         >  1:355124/1‑140 (MQ=255)

        aTGCGAAGGTGACGGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAg                                                                                                                         >  1:601432/1‑140 (MQ=255)

        aTGCGAAGGTGACGGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAg                                                                                                                         >  1:574889/1‑140 (MQ=255)

                   aCGGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAAtt                                                                                                              >  1:971765/1‑140 (MQ=255)

                   aCGGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAAtt                                                                                                              >  1:62275/1‑140 (MQ=255)

                          cGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGaa                                                                                                       >  2:558147/1‑140 (MQ=255)

                            cTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAAt                                                                                                     >  2:711807/1‑140 (MQ=255)

                               gAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGa                                                                                                  <  1:953163/140‑1 (MQ=255)

                                aGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGAt                                                                                                 <  2:400626/140‑1 (MQ=255)

                                aGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGAt                                                                                                 <  2:377892/140‑1 (MQ=255)

                                aGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGAt                                                                                                 <  1:425472/140‑1 (MQ=255)

                                 gtgtCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATc                                                                                                <  2:836478/140‑1 (MQ=255)

                                 gtgtCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATc                                                                                                <  2:839381/140‑1 (MQ=255)

                                         gTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCa                                                                                        <  2:143511/140‑1 (MQ=255)

                                         gTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCa                                                                                        <  1:954361/140‑1 (MQ=255)

                                         gTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCa                                                                                        <  2:574889/140‑1 (MQ=255)

                                         gTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCa                                                                                        <  1:389039/140‑1 (MQ=255)

                                         gTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCa                                                                                        <  1:558147/140‑1 (MQ=255)

                                           tGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAAt                                                                                      >  2:89654/1‑140 (MQ=255)

                                           tGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAAt                                                                                      >  1:832859/1‑140 (MQ=255)

                                            gCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATg                                                                                     >  1:1028924/1‑140 (MQ=255)

                                            gCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATg                                                                                     >  2:90039/1‑140 (MQ=255)

                                             cGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATgg                                                                                    >  2:53268/1‑140 (MQ=255)

                                               ggAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGtt                                                                                  <  2:352652/140‑1 (MQ=255)

                                                gAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTg                                                                                 <  1:53268/140‑1 (MQ=255)

                                                gAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTg                                                                                 <  2:537421/140‑1 (MQ=255)

                                                gAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTg                                                                                 <  2:832859/140‑1 (MQ=255)

                                                gAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTACAATGGTTg                                                                                 <  2:355124/140‑1 (MQ=255)

                                                    ccGTTTACTCATCAGGTCTACACAGCGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGa                                                                             <  2:113202/140‑1 (MQ=255)

                                                    ccGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGa                                                                             <  2:601432/140‑1 (MQ=255)

                                                       tttACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGa                                                                          >  1:138686/1‑140 (MQ=255)

                                                         tACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTg                                                                                 <  1:654673/131‑1 (MQ=255)

                                                         tACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTg                                                                                 >  2:654673/1‑131 (MQ=255)

                                                         tACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGaaa                                                                        <  1:480665/140‑1 (MQ=255)

                                                               tcaGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATcc                                                                  >  1:229945/1‑140 (MQ=255)

                                                                 aGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTc                                                                >  1:712620/1‑140 (MQ=255)

                                                                   gTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGc                                                              <  1:201340/140‑1 (MQ=255)

                                                                    tCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGcc                                                             <  2:545224/140‑1 (MQ=255)

                                                                    tCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGcc                                                             >  2:63174/1‑140 (MQ=255)

                                                                      tACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCtt                                                           <  2:407853/140‑1 (MQ=255)

                                                                       acacAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTg                                                          <  2:138686/140‑1 (MQ=255)

                                                                            aCGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGt                                                     <  1:263519/140‑1 (MQ=255)

                                                                             cGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGTACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTa                                                    >  1:780459/1‑140 (MQ=255)

                                                                             cGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTa                                                    >  2:93205/1‑140 (MQ=255)

                                                                             cGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTa                                                    >  2:315612/1‑140 (MQ=255)

                                                                             cGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTa                                                    >  1:244914/1‑140 (MQ=255)

                                                                             cGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTa                                                    >  2:428692/1‑140 (MQ=255)

                                                                             cGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTa                                                    >  2:114293/1‑140 (MQ=255)

                                                                             cGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTa                                                    >  2:1051225/1‑140 (MQ=255)

                                                                             cGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTa                                                    >  1:875287/1‑140 (MQ=255)

                                                                             cGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTa                                                    >  2:624173/1‑140 (MQ=255)

                                                                             cGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTa                                                    >  1:354409/1‑140 (MQ=255)

                                                                              gTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAg                                                   <  2:106903/140‑1 (MQ=255)

                                                                                aTTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCgg                                                      <  2:473740/135‑1 (MQ=255)

                                                                                aTTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCgg                                                      <  2:952776/135‑1 (MQ=255)

                                                                                aTTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCgg                                                      >  1:473740/1‑135 (MQ=255)

                                                                                aTTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCgg                                                      >  1:952776/1‑135 (MQ=255)

                                                                                   gTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCg                                              <  2:155142/140‑1 (MQ=255)

                                                                                        aGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCa                                         <  1:1051225/140‑1 (MQ=255)

                                                                                        aGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCa                                         <  1:47343/140‑1 (MQ=255)

                                                                                        aGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCa                                         <  2:62275/140‑1 (MQ=255)

                                                                                        aGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGAAGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCa                                         <  1:90039/140‑1 (MQ=255)

                                                                                         gTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCa                                         <  1:915424/139‑1 (MQ=255)

                                                                                         gTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCa                                         >  2:915424/1‑139 (MQ=255)

                                                                                         gTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCAt                                        >  2:663598/1‑140 (MQ=255)

                                                                                         gTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCAt                                        >  2:913820/1‑140 (MQ=255)

                                                                                          tCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCATg                                       >  1:328206/1‑140 (MQ=255)

                                                                                              gtgCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCa                                         >  1:924018/1‑134 (MQ=255)

                                                                                              gtgCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCa                                         <  2:924018/134‑1 (MQ=255)

                                                                                              gtgCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCATGATTc                                   >  2:924314/1‑140 (MQ=255)

                                                                                                 cGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCATGCTTCTGa                                <  2:875287/140‑1 (MQ=255)

                                                                                                 cGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCATGATTCTGa                                <  1:63174/140‑1 (MQ=255)

                                                                                                  gTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCATGATTCTGaa                               <  1:663598/140‑1 (MQ=255)

                                                                                                  gTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCATGATTCTGaa                               <  1:924314/140‑1 (MQ=255)

                                                                                                  gTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCATGATTCTGaa                               <  1:428692/140‑1 (MQ=255)

                                                                                                  gTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCATGATTCTGaa                               <  1:114293/140‑1 (MQ=255)

                                                                                                   ttCAGACGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCATGATTCTGAac                              <  1:467745/140‑1 (MQ=255)

                                                                                                        aCGAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCATGATTCTGAACACtgt                         <  1:451360/140‑1 (MQ=255)

                                                                                                          gAACAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCATGATTCTGAACACTGTGa                       <  2:1028924/140‑1 (MQ=255)

                                                                                                           aaCAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCATGATTCTGAACACTGTGaa                      >  2:421618/1‑140 (MQ=255)

                                                                                                            aCAGGCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCATGATTCTGAACACTGTGAAg                     <  1:913820/140‑1 (MQ=255)

                                                                                                                gCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCATGATTCTGAACACTGTGAAGTGTc                 <  2:186825/140‑1 (MQ=255)

                                                                                                                gCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCATGATTCTGAACACTGTGAAGTGTc                 >  2:675328/1‑140 (MQ=255)

                                                                                                                gCTGAAGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCATGATTCTGAACACTGTGAAGTGTc                 >  2:285286/1‑140 (MQ=255)

                                                                                                                     aGCACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCATGATTCTGAACACTGTGAAGTGTCCGAAg            >  2:637199/1‑140 (MQ=255)

                                                                                                                       cACTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCATGATTCTGAACACTGTGAAGTGTCCGAAGCg          <  1:872388/140‑1 (MQ=255)

                                                                                                                        aCTGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCATGATTCTGAACACTGTGAAGTGTCCGAAGCgg         >  2:164535/1‑140 (MQ=255)

                                                                                                                          tGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCATGATTCTGAACACTGTGAAGTGTCCGAAGCGGAc       <  2:644071/140‑1 (MQ=255)

                                                                                                                          tGCCGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCATGATTCTGAACACTGTGAAGTGTCCGAAGCGGAc       <  1:675328/140‑1 (MQ=255)

                                                                                                                             cGGAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCATGATTCTGAACACTGTGAAGTGTCCGAAGCGGACATg    <  2:712620/140‑1 (MQ=255)

                                                                                                                               gAAGCGCATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCATGATTCTGAACACTGTGAAGTGTCCGAAGCGGACATGGt  <  1:637199/140‑1 (MQ=255)

AAACGGCGATGCGAAGGTGACGGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGTATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCATGATTCTGAACACTGTGAAGTGTCCGAAGCGGACATGGT  >  NC_000913/1146976‑1147242

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`