Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,205,652	Δ1 bp	coding (605/933 nt)	ttdR ←	DNA‑binding transcriptional activator Dan

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,205,650	0	G	.	100.0%	262.1 / NA	61	coding (607/933 nt)	ttdR	DNA‑binding transcriptional activator Dan
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base . (24/37);  total (24/37)

CATCCCACTCGGAACGCAGCATAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGTGCTGCGCATAATATTCTTTTATTTTTTGTCAAAAGATGCG  >  NC_000913/3205512‑3205781                                                                                                                                           |                                                                                                                                    caTCCCACTCGGAACGCAGCATAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCATgg                                                                                                                                    <  1:46879/140‑1 (MQ=255)   tCCCACTCGGAACGCAGCATAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTTCCATATTCCATggtc                                                                                                                                  <  2:579621/140‑3 (MQ=255)   tCCCACTCGGAACGCAGCATAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCATggtc                                                                                                                                  <  2:438643/140‑3 (MQ=255)         tCGGAACGCAGCATAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATcg                                                                                                                           <  2:69528/140‑1 (MQ=255)            gAACGCAGCATAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCgcgc                                                                                                                        >  2:356323/1‑140 (MQ=255)             aaCGCAGCATAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGct                                                                                                                       <  1:252505/140‑1 (MQ=255)                  agcaTAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTg                                                                                                                  >  2:813608/1‑140 (MQ=255)                  agcaTAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTg                                                                                                                  >  2:302889/1‑140 (MQ=255)                     aTAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTc                                                                                                               >  1:10754/1‑140 (MQ=255)                     aTAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTc                                                                                                               <  1:644412/140‑1 (MQ=255)                      tAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCa                                                                                                              <  1:588074/140‑1 (MQ=255)                         tCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCa                                                                                                           >  1:457542/1‑140 (MQ=255)                           ccTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGa                                                                                                         <  1:302889/140‑1 (MQ=255)                           ccTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGa                                                                                                         <  1:813608/140‑1 (MQ=255)                              ttGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAg                                                                                                      >  1:798036/1‑140 (MQ=255)                                    tCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATga                                                                                                <  2:798036/140‑1 (MQ=255)                                    tCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATga                                                                                                >  1:123494/1‑140 (MQ=255)                                    tCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATga                                                                                                <  1:405556/140‑1 (MQ=255)                                      cAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATgacg                                                                                              >  1:435816/1‑140 (MQ=255)                                       aGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATgacga                                                                                             >  1:474670/1‑140 (MQ=255)                                        gcgcCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATgacgac                                                                                            <  1:213894/140‑1 (MQ=255)                                        gcgcCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATgacgac                                                                                            <  1:693725/140‑1 (MQ=255)                                           cccATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTa                                                                                         >  1:497766/1‑140 (MQ=255)                                           cccATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTa                                                                                         >  1:545869/1‑140 (MQ=255)                                           cccATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTa                                                                                         >  1:307106/1‑140 (MQ=255)                                            ccATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTaa                                                                                        <  2:519355/140‑1 (MQ=255)                                            ccATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTaa                                                                                        <  2:422747/140‑1 (MQ=255)                                             cATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAAt                                                                                       <  2:307106/140‑1 (MQ=255)                                             cATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAAt                                                                                       <  1:327160/140‑1 (MQ=255)                                              aTTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAAtt                                                                                      >  1:810031/1‑140 (MQ=255)                                                tGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTcc                                                                                    >  1:531193/1‑140 (MQ=255)                                                   agcaCAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGt                                                                                 <  1:166331/140‑1 (MQ=255)                                                        aaTCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAAtt                                                                                      >  1:266882/1‑130 (MQ=255)                                                        aaTCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAAtt                                                                                      <  2:266882/130‑1 (MQ=255)                                                          tctcGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAAt                                                                                       <  2:874513/127‑1 (MQ=255)                                                          tctcGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAAt                                                                                       <  2:203541/127‑1 (MQ=255)                                                          tctcGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAAt                                                                                       >  1:203541/1‑127 (MQ=255)                                                          tctcGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAAt                                                                                       >  1:874513/1‑127 (MQ=255)                                                          tctcGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGAtt                                                                          >  2:675397/1‑140 (MQ=255)                                                          tctcGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGAtt                                                                          >  2:488498/1‑140 (MQ=255)                                                                cgcTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCt                                                                    <  1:855843/140‑1 (MQ=255)                                                                         aggaAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATAtt                                                           <  1:389448/140‑1 (MQ=255)                                                                           gaAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATAtttt                                                         <  2:109241/140‑1 (MQ=255)                                                                             aaGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTg                                                       <  2:545869/140‑1 (MQ=255)                                                                             aaGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTg                                                       >  2:698831/1‑140 (MQ=255)                                                                              aGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGTCTTAATGCCTGTAGGGATTGTGGCTGCGGATATTTTTGc                                                      <  2:474670/140‑1 (MQ=255)                                                                              aGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGc                                                      <  2:123494/140‑1 (MQ=255)                                                                                 tGCCCGCTTTCCCTCACCGATTTTTGCTCCTGACCGTTCCCCAACTCCCATATTTCCT‑TGTCATATCGCGCTCTTTGGTCCCCAGACAGTCATGACGACTTAATTTCTGTCGGGATTGTGGCTTCGGATATTTTTGCAGa                                                   <  2:512479/140‑1 (MQ=255)                                                                                   cccGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGCCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATa                                                 >  1:404118/1‑140 (MQ=255)                                                                                      gCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTc                                              <  1:212358/140‑1 (MQ=255)                                                                                           ccTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGtg                                         <  2:404118/140‑1 (MQ=255)                                                                                           ccTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGtg                                         <  2:363819/140‑1 (MQ=255)                                                                                           ccTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGtg                                         >  1:363819/1‑140 (MQ=255)                                                                                             ttCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGtgct                                       <  2:379258/140‑1 (MQ=255)                                                                                               cACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGtgctgc                                     <  1:698831/140‑1 (MQ=255)                                                                                                                                ccATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGTGCTGCGCATAATATTCTTTTATTTTTTGTCAAAAGATg    <  1:488498/140‑1 (MQ=255)                                                                                                                                ccATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGTGCTGCGCATAATATTCTTTTATTTTTTGTCAAAAGATg    >  1:127202/1‑140 (MQ=255)                                                                                                                                ccATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGTGCTGCGCATAATATTCTTTTATTTTTTGTCAAAAGATg    <  2:435816/140‑1 (MQ=255)                                                                                                                                ccATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGTGCTGCGCATAATATTCTTTTATTTTTTGTCAAAAGATg    >  1:603504/1‑140 (MQ=255)                                                                                                                                ccATATTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGTGCTGCGCATAATATTCTTTTATTTTTTGTCAAAAGATg    <  1:715811/140‑1 (MQ=255)                                                                                                                                  atatTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGTGCTGCGCATAATATTCTTTTATTTTTTGTCAAAAGATgcg  <  2:603504/140‑1 (MQ=255)                                                                                                                                  atatTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGTGCTGCGCATAATATTCTTTTATTTTTTGTCAAAAGATgcg  <  2:497766/140‑1 (MQ=255)                                                                                                                                  atatTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGTGCTGCGCATAATATTCTTTTATTTTTTGTCAAAAGATgcg  <  2:182581/140‑1 (MQ=255)                                                                                                                                  atatTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGTGCTGCGCATAATATTCTTTTATTTTTTGTCAAAAGATgcg  <  2:127202/140‑1 (MQ=255)                                                                                                                                  atatTCCAT‑GGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGTGCTGCGCATAATATTCTTTTATTTTTTGTCAAAAGATgcg  <  2:10754/140‑1 (MQ=255)                                                                                                                                           |                                                                                                                                    CATCCCACTCGGAACGCAGCATAATCCCTTTGCCCTCCAGCGCCCATTGCAGCACAATCTCGCCGCTATTGGAGGAAAGATGCCCGCTTACCTTCACCGATTTTTTCTCCTGACCGTTCCCCAACTCCCATATTCCATGGGTCATATCGCGCTCTTTGGTCACCAGACAGTCATGACGACTTAATTCCTGTAGGGATTGTGGCTGCGGATATTTTTGCAGATACTCAGGTGCTGCGCATAATATTCTTTTATTTTTTGTCAAAAGATGCG  >  NC_000913/3205512‑3205781

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑