Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,770,058	T→C	V119A (GTT→GCT)	yfjR →	CP4‑57 prophage; putative DNA‑binding transcriptional regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,770,058	0	T	C	100.0%	236.2 / NA	65	V119A (GTT→GCT)	yfjR	CP4‑57 prophage; putative DNA‑binding transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (32/33);  total (32/33)

AGATGGTGCCCGACGTGCTTATCTTTGCCCACCGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGTTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGACGCTGTGAGCGCCTAGCTCCCTGCCGGTTACTCATCCACCAGCAGAC  >  NC_000913/2769923‑2770193                                                                                                                                        |                                                                                                                                        aGATGGTGCCCGACGTGCTTATCTTTGCCCACCGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCt                                                                                                                                     <  2:616609/140‑1 (MQ=255)   aTGGTGCCCGACGTGCTTATCTTTGCCCACCGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTc                                                                                                                                   >  2:49033/1‑140 (MQ=255)    tGGTGCCCGACGTGCTTATCTTTGCCCACCGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCg                                                                                                                                  <  1:885001/140‑1 (MQ=255)       tGCCCGACGTGCTTATCTTTGCCCACCGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCt                                                                                                                               >  1:173771/1‑140 (MQ=255)       tGCCCGACGTGCTTATCTTTGCCCACCGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCt                                                                                                                               >  1:316114/1‑140 (MQ=255)        gCCCGACGTGCTTATCTTTGCCCACCGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCtt                                                                                                                              >  1:354534/1‑140 (MQ=255)         cccGACGTGCTTATCTTTGCCCACCGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTc                                                                                                                             >  2:241947/1‑140 (MQ=255)         cccGACGTGCTTATCTTTGCCCACCGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTc                                                                                                                             >  2:430306/1‑140 (MQ=255)          ccGACGTGCTTATCTTTGCCCACCGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCa                                                                                                                            <  2:734935/140‑1 (MQ=255)             aCGTGCTTATCTTTGCCCACCGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGa                                                                                                                         >  2:176508/1‑140 (MQ=255)              cGTGCTTATCTTTGCCCACCGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAg                                                                                                                        <  1:241947/140‑1 (MQ=255)                 gCTTATCTTTGCCCACCGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCAt                                                                                                                     >  1:176886/1‑140 (MQ=255)                 gCTTATCTTTGCCCACCGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCAt                                                                                                                     <  1:749214/140‑1 (MQ=255)                     aTCTTTGCCCACCGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTc                                                                                                                 <  2:880692/140‑1 (MQ=255)                     aTCTTTGCCCACCGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTc                                                                                                                 <  2:316114/140‑1 (MQ=255)                          tGCCCACCGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCt                                                                                                            >  2:416693/1‑140 (MQ=255)                          tGCCCACCGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCt                                                                                                            >  2:834488/1‑140 (MQ=255)                           gCCCACCGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTg                                                                                                           <  1:49033/140‑1 (MQ=255)                               aCCGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCt                                                                                                                <  2:643159/131‑1 (MQ=255)                               aCCGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCt                                                                                                                >  1:643159/1‑131 (MQ=255)                               aCCGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGgaga                                                                                                       <  1:421698/140‑1 (MQ=255)                               aCCGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGgaga                                                                                                       >  2:667756/1‑140 (MQ=255)                                ccGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGAc                                                                                                      <  2:336011/140‑1 (MQ=255)                                ccGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGAc                                                                                                      <  1:834488/140‑1 (MQ=255)                                         gCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAgg                                                                                             <  1:338250/140‑1 (MQ=255)                                             gCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCAt                                                                                         >  2:799879/1‑140 (MQ=255)                                                       ttCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGgcgc                                                                               <  1:430306/140‑1 (MQ=255)                                                                    ccgccgTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGc                                                                  <  2:176886/140‑1 (MQ=255)                                                                     cgccgTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCt                                                                 <  1:486648/140‑1 (MQ=255)                                                                     cgccgTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCt                                                                 <  2:390643/140‑1 (MQ=255)                                                                        cgTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCt                                                                 <  1:175477/137‑1 (MQ=255)                                                                        cgTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCt                                                                 >  2:175477/1‑137 (MQ=255)                                                                        cgTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGAt                                                              >  2:422470/1‑140 (MQ=255)                                                                          tCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTg                                                            >  1:449306/1‑140 (MQ=255)                                                                               tGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCagag                                                       <  2:449306/140‑1 (MQ=255)                                                                                 aaTGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAggg                                                     <  1:422470/140‑1 (MQ=255)                                                                                   tGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGc                                                   <  1:422848/140‑1 (MQ=255)                                                                                    gCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCg                                                  <  1:667756/140‑1 (MQ=255)                                                                                      aCTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGAc                                                >  2:222569/1‑140 (MQ=255)                                                                                      aCTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGAc                                                <  2:173771/140‑1 (MQ=255)                                                                                      aCTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGAc                                                >  1:654593/1‑140 (MQ=255)                                                                                        tgctgATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGACGc                                              >  2:7653/1‑140 (MQ=255)                                                                                         gctgATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGACGCt                                             >  2:673924/1‑140 (MQ=255)                                                                                            gATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGACGCtgtg                                          <  1:176508/140‑1 (MQ=255)                                                                                            gATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGACGCtgtg                                          <  2:293641/140‑1 (MQ=255)                                                                                             aTGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGTGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGACGCTGTGa                                         >  2:906647/1‑140 (MQ=255)                                                                                             aTGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGACGCTGTGa                                         >  2:219992/1‑140 (MQ=255)                                                                                                  cGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGACGCTGTGAGCGcc                                    >  1:80454/1‑140 (MQ=255)                                                                                                         tctcCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGACGCtgt                                           <  1:52064/126‑1 (MQ=255)                                                                                                         tctcCCTGCGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGACGCtgt                                           >  2:52064/1‑126 (MQ=255)                                                                                                                 cGTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGACGCTGTGAGCGCCTAGCTCCCTGCCGGt                     >  1:932917/1‑140 (MQ=255)                                                                                                                  gTGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGACGCTGTGAGCGCCTAGCTCCCTGCCGGtt                    >  2:642422/1‑140 (MQ=255)                                                                                                                   tGATAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGACGCTGTGAGCGCCTAGCTCCCTGCCGGTTa                   >  2:384017/1‑140 (MQ=255)                                                                                                                     aTAGCACCAGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGACGCTGTGAGCGCCTAGCTCCCTGCCGGTTACt                 <  1:227317/140‑1 (MQ=255)                                                                                                                             aGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGACGCTGTGAGCGCCTAGCTCCCTGCCGGtt                    <  2:463063/129‑1 (MQ=255)                                                                                                                             aGCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGACGCTGTGAGCGCCTAGCTCCCTGCCGGtt                    >  1:463063/1‑129 (MQ=255)                                                                                                                              gCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGACGCTGTGAGCGCCTAGCTCCCTGCCGGTTACt                 >  1:583503/1‑131 (MQ=255)                                                                                                                              gCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGACGCTGTGAGCGCCTAGCTCCCTGCCGGTTACt                 <  2:583503/131‑1 (MQ=255)                                                                                                                              gCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGACGCTGTGAGCGCCTAGCTCCCTGCCGGTTACTCATccacca        >  2:558259/1‑140 (MQ=255)                                                                                                                              gCCAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGACGCTGTGAGCGCCTAGCTCCCTGCCGGTTACTCATccacca        >  2:493524/1‑140 (MQ=255)                                                                                                                               ccAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGACGCTGTGAGCGCCTAGCTCCCTGCCGGTTACTCATCCACcag       <  1:815362/140‑1 (MQ=255)                                                                                                                                cAATCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGAGACGCTGATTGCAGAGGGGCGACCCTGTGAGCGCCTAGCTCCCTGCCGGTTACTCATCCACcagc      >  2:332793/1‑140 (MQ=255)                                                                                                                                 aaTCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGACGCTGTGAGCGCCTAGCTCCCTGCCGGTTACTCATCCACcagca     <  2:354534/140‑1 (MQ=255)                                                                                                                                  aTCCGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGACGCTGTGAGCGCCTAGCTCCCTGCCGGTTACTCATCCACcagcag    <  2:932917/140‑1 (MQ=255)                                                                                                                                    ccGGCTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGACGCTGTGAGCGCCTAGCTCCCTGCCGGTTACTCATCCACCAGCAGAc  <  1:799879/140‑1 (MQ=255)                                                                                                                                        |                                                                                                                                        AGATGGTGCCCGACGTGCTTATCTTTGCCCACCGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGTTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGACGCTGTGAGCGCCTAGCTCCCTGCCGGTTACTCATCCACCAGCAGAC  >  NC_000913/2769923‑2770193

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑