BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,060,772	(T)_8→7	intergenic (+126/‑78)	argP → / → scpA	DNA‑binding transcriptional dual regulator ArgP/methylmalonyl‑CoA mutase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,060,765	0	T	.	100.0%	532.8 / NA	125	intergenic (+119/‑85)	argP/scpA	DNA‑binding transcriptional dual regulator ArgP/methylmalonyl‑CoA mutase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (70/55); total (70/55)

Only 100 of 129 total aligned reads displayed.

AAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCATTTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTAACGTGCAGGAGTGGCAACAGCTTGCCA  >  NC_000913/3060626‑3060883

aaaGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCAt                                                                                                                        >  2:1092461/1‑140 (MQ=255)

            cAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGc                                                                                                           >  1:376396/1‑140 (MQ=255)

              ggATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAGATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGa                                                                                                         >  1:82006/1‑140 (MQ=255)

              ggATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGa                                                                                                         >  2:1236540/1‑140 (MQ=255)

               gATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGC‑AAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACa                                                                                                       >  1:1155725/1‑140 (MQ=255)

                    aTCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCAtttttttgct                                                                                                               <  2:1478736/129‑4 (MQ=255)

                    aTCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCAtttttttgct                                                                                                               >  1:1478736/1‑126 (MQ=255)

                    aTCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAAcc                                                                                                   >  1:687568/1‑140 (MQ=255)

                    aTCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAAcc                                                                                                   >  1:688100/1‑140 (MQ=255)

                         tCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGt                                                                                              >  2:801377/1‑140 (MQ=255)

                         tCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGt                                                                                              >  1:554460/1‑140 (MQ=255)

                         tCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGt                                                                                              <  1:723546/140‑1 (MQ=255)

                          cAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTa                                                                                             <  1:681275/140‑1 (MQ=255)

                               aatGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAg                                                                                        <  2:567228/140‑1 (MQ=255)

                                atGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGc                                                                                       >  1:152370/1‑140 (MQ=255)

                                   ccTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAAccc                                                                                                  <  2:535717/126‑1 (MQ=255)

                                   ccTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAAccc                                                                                                  >  1:535717/1‑126 (MQ=255)

                                   ccTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCa                                                                                    >  1:820329/1‑140 (MQ=255)

                                          gCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAgg                                                                             <  2:27161/140‑1 (MQ=255)

                                           cacaTATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGgc                                                                            >  1:1163119/1‑140 (MQ=255)

                                               tatCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCaa                                                                        <  1:987374/140‑1 (MQ=255)

                                                atCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCaaa                                                                       <  2:820329/140‑1 (MQ=255)

                                                atCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCaaa                                                                       >  2:1292418/1‑140 (MQ=255)

                                                atCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCaaa                                                                       <  2:867630/140‑1 (MQ=255)

                                                 tCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCg                                                                                 <  1:263671/129‑1 (MQ=255)

                                                 tCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCg                                                                                 >  2:263671/1‑129 (MQ=255)

                                                    ggCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATAcc                                                                   <  1:1271515/140‑1 (MQ=255)

                                                    ggCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATAcc                                                                   <  2:439291/140‑1 (MQ=255)

                                                    ggCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATAcc                                                                   >  1:441061/1‑140 (MQ=255)

                                                    ggCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATAcc                                                                   <  2:376527/140‑1 (MQ=255)

                                                     gCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCg                                                                                 >  1:1231013/1‑125 (MQ=255)

                                                     gCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCg                                                                                 <  2:1231013/125‑1 (MQ=255)

                                                      cGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCt                                                                 >  1:1398643/1‑140 (MQ=255)

                                                        ttGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGgcg                                                                           <  1:120912/128‑1 (MQ=255)

                                                        ttGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCa                                                               >  1:938599/1‑140 (MQ=255)

                                                        ttGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCa                                                               >  2:1642853/1‑140 (MQ=255)

                                                        ttGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCa                                                               >  1:158229/1‑140 (MQ=255)

                                                          gTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCAtt                                                             >  1:650226/1‑140 (MQ=255)

                                                          gTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCAtt                                                             >  2:1641968/1‑140 (MQ=255)

                                                          gTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCAtt                                                             >  2:158251/1‑140 (MQ=255)

                                                          gTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCAtt                                                             >  1:883380/1‑140 (MQ=255)

                                                          gTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCAtt                                                             >  2:44840/1‑140 (MQ=255)

                                                          gTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCAtt                                                             >  2:1456095/1‑140 (MQ=255)

                                                          gTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCAtt                                                             >  1:864859/1‑140 (MQ=255)

                                                          gTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCAtt                                                             >  2:1427658/1‑140 (MQ=255)

                                                          gTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCAtt                                                             >  2:139768/1‑140 (MQ=255)

                                                          gTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCAtt                                                             >  2:564747/1‑140 (MQ=255)

                                                          gTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCAtt                                                             >  2:332049/1‑140 (MQ=255)

                                                          gTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCAtt                                                             >  1:199396/1‑140 (MQ=255)

                                                          gTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCAtt                                                             >  1:229415/1‑140 (MQ=255)

                                                          gTCCTCACTTCCTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATAcc                                                                   >  1:1246762/1‑134 (MQ=255)

                                                          gTCCTCACTTCCTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATAcc                                                                   <  2:1246762/134‑1 (MQ=255)

                                                              tCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGa                                                         <  1:1092461/140‑1 (MQ=255)

                                                              tCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGa                                                         <  1:1121620/140‑1 (MQ=255)

                                                                aCTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGAtt                                                       <  1:1443417/140‑1 (MQ=255)

                                                                  ttcttTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATAcc                                                                   <  2:1592625/126‑1 (MQ=255)

                                                                  ttcttTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATAcc                                                                   >  1:1592625/1‑126 (MQ=255)

                                                                   tcttTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCg                                                    <  1:405319/140‑1 (MQ=255)

                                                                         tGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTAc                                              <  1:620615/140‑1 (MQ=255)

                                                                         tGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTAc                                              <  2:199396/140‑1 (MQ=255)

                                                                         tGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTAc                                              <  2:650226/140‑1 (MQ=255)

                                                                         tGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTAc                                              <  2:1163119/140‑1 (MQ=255)

                                                                          gTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACg                                             >  2:625427/1‑140 (MQ=255)

                                                                             ttCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAg                                          <  2:864859/140‑1 (MQ=255)

                                                                             ttCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAg                                          <  1:1174478/140‑1 (MQ=255)

                                                                                cTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCaa                                       >  1:350667/1‑140 (MQ=255)

                                                                                  tGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAaat                                     <  1:1236540/140‑1 (MQ=255)

                                                                                  tGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAaat                                     >  2:235314/1‑140 (MQ=255)

                                                                                       cacatcacaAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGt                                <  2:229415/140‑1 (MQ=255)

                                                                                          atcacaAAATAGACAGATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTa                             <  2:82006/140‑1 (MQ=255)

                                                                                          atcacaAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTAc                                              >  2:1377562/1‑123 (MQ=255)

                                                                                          atcacaAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTAc                                              <  1:1377562/123‑1 (MQ=255)

                                                                                          atcacaAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCaa                                       >  2:1325571/1‑130 (MQ=255)

                                                                                          atcacaAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCaa                                       <  1:1325571/130‑1 (MQ=255)

                                                                                          atcacaAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTa                             >  1:964663/1‑140 (MQ=255)

                                                                                          atcacaAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTa                             <  2:410391/140‑1 (MQ=255)

                                                                                          atcacaAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTa                             <  1:1292418/140‑1 (MQ=255)

                                                                                          atcacaAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTa                             >  1:392340/1‑140 (MQ=255)

                                                                                          atcacaAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTa                             >  1:1135755/1‑140 (MQ=255)

                                                                                          atcacaAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTa                             <  1:728426/140‑1 (MQ=255)

                                                                                          atcacaAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTa                             <  1:1072894/140‑1 (MQ=255)

                                                                                              caAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTAACGt                         <  2:392340/140‑1 (MQ=255)

                                                                                               aaaaTAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTAACGTg                        >  1:1304379/1‑140 (MQ=255)

                                                                                               aaaaTAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTAACGTg                        <  1:1456095/140‑1 (MQ=255)

                                                                                                    aGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCACTTTGATTGCGTTTTACGGAGCAAATAATGTCTAACGTGCAGGa                   <  2:1474475/140‑1 (MQ=255)

                                                                                                     gACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTAACGTGCAGGAg                  <  2:907051/140‑1 (MQ=255)

                                                                                                      aCAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTAACGTGCAGGAGt                 >  1:643279/1‑140 (MQ=255)

                                                                                                        aaaTCTCAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTAACGTGCAGGAGTgg               >  1:873894/1‑140 (MQ=255)

                                                                                                           tctcAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTAACGTGCAGGAGTGGCaa            >  2:867375/1‑140 (MQ=255)

                                                                                                           tctcAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTAACGTGCAGGAGTGGCaa            >  2:1030214/1‑140 (MQ=255)

                                                                                                            ctcAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTAACGTGCAGGAGTGGCAAc           <  1:867375/140‑1 (MQ=255)

                                                                                                            ctcAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTAACGTGCAGGAGTGGCAAc           <  2:158229/140‑1 (MQ=255)

                                                                                                             tcAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTAACGTGCAgg                    <  2:1565231/130‑1 (MQ=255)

                                                                                                             tcAGGCGGCAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTAACGTGCAgg                    >  1:1565231/1‑130 (MQ=255)

                                                                                                                   ggcAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTAACGTGCAGGAGTGGCAACAGCTTGc    <  2:1398643/140‑1 (MQ=255)

                                                                                                                   ggcAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTAACGTGCAGGAGTGGCAACAGCTTGc    <  2:964663/140‑1 (MQ=255)

                                                                                                                   gacAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTAACGTGCAGGAGTGGCAACAGCTTGc    <  2:923991/138‑1 (MQ=255)

                                                                                                                    gcAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTAACGTGCAGGAGGGGCTACAGCTTGcc   >  2:1020971/1‑140 (MQ=255)

                                                                                                                     cAAAAAACGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTAACGTGCAGGAGTGGCAACAGCTTGCca  >  1:1288898/1‑140 (MQ=255)

                                                                                                                      aaaaaaCGACGTCTGAATGCA‑TTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTAACGTGCAGGAGTGGCAACAGc        <  2:1301716/133‑1 (MQ=255)

AAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCATTTTTTTTGCTGGCGACAAACCCACGTAAAAAGCTCACCGTAGGCGCAAATACCCTCATTTTGATTGCGTTTTACGGAGCAAATAATGTCTAACGTGCAGGAGTGGCAACAGCTTGCCA  >  NC_000913/3060626‑3060883

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`