Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,668,544	(C)6→7	coding (645/1398 nt)	ccp ←	cytochrome c peroxidase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,668,538	1	.	C	94.1%	281.7 / 9.2	85	coding (651/1398 nt)	ccp	cytochrome c peroxidase
Reads supporting (aligned to +/- strand):  ref base . (3/2);  new base C (49/31);  total (52/33)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.29e-01

AGCCTGATCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACG‑CC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATGGGCTG  >  NC_000913/3668406‑3668669                                                                                                                                      |                                                                                                                                     aGCCTGATCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACG‑cc‑ccccc                                                                                                                              <  2:55783/140‑2 (MQ=255) aGCCTGATCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACG‑cc‑ccccc                                                                                                                              <  1:352622/140‑2 (MQ=255)          cTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACG‑cc                                                                                                                                    <  2:33198/126‑1 (MQ=255)          cTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACG‑cc                                                                                                                                    >  1:33198/1‑126 (MQ=255)           tGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACg                                                                                                                     >  2:1117404/1‑140 (MQ=255)            gCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGc                                                                                                                    <  2:1039703/140‑1 (MQ=255)            gCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGc                                                                                                                    >  2:1497946/1‑140 (MQ=255)            gCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGc                                                                                                                    >  2:26460/1‑140 (MQ=255)             cAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCa                                                                                                                   <  2:305651/140‑1 (MQ=255)                  ttGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCa                                                                                                              >  2:648289/1‑140 (MQ=255)                  ttGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCa                                                                                                              >  1:1444972/1‑140 (MQ=255)                  ttGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACG‑cc‑ccccc                                                                                                                              <  2:338181/123‑2 (MQ=255)                  ttGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACG‑cc‑ccccc                                                                                                                              >  1:338181/1‑122 (MQ=255)                     ccGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATg                                                                                                           >  1:1502174/1‑140 (MQ=255)                     ccGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATg                                                                                                           <  1:1497946/140‑1 (MQ=255)                        cACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAgc                                                                                                        <  1:495835/140‑1 (MQ=255)                           gACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCa                                                                                                     <  1:648289/140‑1 (MQ=255)                            aCCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCAt                                                                                                    >  1:1244119/1‑140 (MQ=255)                                tCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGaaa                                                                                                >  1:828771/1‑140 (MQ=255)                                tCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGaaa                                                                                                <  2:1444972/140‑1 (MQ=255)                                       aCTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCt                                                                                         >  2:1143321/1‑140 (MQ=255)                                          gCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGGTATc                                                                                      >  1:1072542/1‑140 (MQ=255)                                           cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATg                                                                                                   <  1:1359168/126‑1 (MQ=255)                                           cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATg                                                                                                   >  2:1359168/1‑126 (MQ=255)                                           cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                     >  2:1136968/1‑140 (MQ=255)                                           cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                     >  1:1095306/1‑140 (MQ=255)                                           cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                     >  1:850528/1‑140 (MQ=255)                                           cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                     >  2:114830/1‑140 (MQ=255)                                           cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                     >  1:76623/1‑140 (MQ=255)                                           cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                     >  2:1598881/1‑140 (MQ=255)                                           cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                     >  1:587974/1‑140 (MQ=255)                                           cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                     >  1:569501/1‑140 (MQ=255)                                           cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                     >  1:1037159/1‑140 (MQ=255)                                           cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                     >  2:682621/1‑140 (MQ=255)                                           cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                     >  2:440295/1‑140 (MQ=255)                                           cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACG‑CCGCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                     >  2:180370/1‑140 (MQ=255)                                            tCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAg                                                                                    <  1:114830/140‑1 (MQ=255)                                               aCGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCg                                                                                 <  2:1502174/140‑1 (MQ=255)                                                  ttAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATa                                                                              <  1:26460/140‑1 (MQ=255)                                                    aaaTACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATaaa                                                                            <  2:1244119/140‑1 (MQ=255)                                                        aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                        <  2:569501/140‑1 (MQ=255)                                                        aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                        <  2:1095306/140‑1 (MQ=255)                                                        aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                        <  1:1598881/140‑1 (MQ=255)                                                        aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                        <  2:208707/140‑1 (MQ=255)                                                        aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                        <  1:408740/140‑1 (MQ=255)                                                        aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                        <  1:1136968/140‑1 (MQ=255)                                                        aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                        <  1:1143321/140‑1 (MQ=255)                                                        aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACG‑CCGCCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                        <  1:180370/140‑1 (MQ=255)                                                          tGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGa                                                                      >  1:830828/1‑140 (MQ=255)                                                          tGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGa                                                                      <  1:709808/140‑1 (MQ=255)                                                          tGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGa                                                                      <  1:440295/140‑1 (MQ=255)                                                           gAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATc                                                                                      <  2:428918/123‑1 (MQ=255)                                                           gAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATc                                                                                      >  1:428918/1‑123 (MQ=255)                                                            aGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATc                                                                    >  2:1041651/1‑140 (MQ=255)                                                            aGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATc                                                                    >  1:1642190/1‑140 (MQ=255)                                                            aGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATc                                                                    >  2:580769/1‑140 (MQ=255)                                                              ttAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGt                                                                  >  1:757173/1‑140 (MQ=255)                                                                  aTACCGACGGCGCGGTAATCGGCCCAACTGCGCCACCAACACCAACCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCACGGCAACGAGCGCATGAAAAGGTGCTCTCAGCCGATAAACGCGGATCGTGATa                                                              >  2:197685/1‑140 (MQ=255)                                                                   tACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATAc                                                             >  1:1048775/1‑140 (MQ=255)                                                                      cGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                        >  2:1335108/1‑126 (MQ=255)                                                                      cGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                        >  1:698420/1‑126 (MQ=255)                                                                      cGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                        <  2:698420/126‑1 (MQ=255)                                                                      cGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                        <  1:1335108/126‑1 (MQ=255)                                                                      cGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAgc                                                          >  2:680462/1‑140 (MQ=255)                                                                      cGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAgc                                                          >  2:490917/1‑140 (MQ=255)                                                                      cGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAgc                                                          >  1:823504/1‑140 (MQ=255)                                                                      cGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATAAGCCGATAAACGGGGATCGTGATACAgc                                                          >  1:480992/1‑140 (MQ=255)                                                                        tCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAgcgc                                                        >  1:1103969/1‑140 (MQ=255)                                                                        tCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAgcgc                                                        >  2:1157514/1‑140 (MQ=255)                                                                           gcgcGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAGTGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCaaa                                                     >  2:308161/1‑140 (MQ=255)                                                                            cgcgTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCaaaa                                                    >  1:705237/1‑140 (MQ=255)                                                                                          cAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACttt                                      <  1:772598/140‑1 (MQ=255)                                                                                             cTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTg                                   >  2:399681/1‑140 (MQ=255)                                                                                                cgcCACCAACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTgcgc                                >  2:1524874/1‑140 (MQ=255)                                                                                                  ccaccaACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTgc                                  <  2:67279/136‑1 (MQ=255)                                                                                                  ccaccaACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTgc                                  >  1:67279/1‑136 (MQ=255)                                                                                                  ccaccaACACCAATCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCAt                              >  1:687443/1‑140 (MQ=255)                                                                                                     ccaacaccaaTCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCgg                           >  1:1659726/1‑140 (MQ=255)                                                                                                          accaaTCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGc                      >  2:1387846/1‑140 (MQ=255)                                                                                                               tCGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGttt                 >  2:892351/1‑140 (MQ=255)                                                                                                                cGATGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGtttt                >  2:176851/1‑140 (MQ=255)                                                                                                                cGATGTTTTTCTGCCATCGACG‑CC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGttttt               <  2:1606770/140‑1 (MQ=255)                                                                                                                cGATGTTTTTCTGCCATCGACG‑CC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGttttt               >  1:1606770/1‑140 (MQ=255)                                                                                                                cGATGTTTTTCTGCCATCGACG‑CC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGttttt               >  1:1482587/1‑140 (MQ=255)                                                                                                                  aTGTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTg              <  2:1037159/140‑1 (MQ=255)                                                                                                                    gTTTTTCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCg            >  2:203257/1‑140 (MQ=255)                                                                                                                      ttttCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCggg          <  2:1250977/140‑1 (MQ=255)                                                                                                                      ttttCTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCggg          <  2:1048775/140‑1 (MQ=255)                                                                                                                          cTGCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATgg      >  2:207378/1‑140 (MQ=255)                                                                                                                            gCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATGGGc    <  2:587974/140‑1 (MQ=255)                                                                                                                            gCCATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATGGGc    <  1:176851/140‑1 (MQ=255)                                                                                                                              cATCGACGCCC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATGGGCTg  <  1:1524874/140‑1 (MQ=255)                                                                                                                                      |                                                                                                                                     AGCCTGATCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACG‑CC‑CCCCGCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATGGGCTG  >  NC_000913/3668406‑3668669

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑