| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3214947 = | 30 (0.310) | 35 (0.360) | 26/270 | 2.4 | 54.2% | intergenic (+59/+20) | rpoD/mug | RNA polymerase, sigma 70 (sigma D) factor/stationary phase mismatch/uracil DNA glycosylase |
| ? | NC_000913 | 4502090 = | NA (NA) | noncoding (1426/1426 nt) | IS4 | repeat region | |||||
Only 100 of 123 total aligned reads displayed.
TCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTTCTCCAGTGAAACGCGACTTAAACCGCTGGGATTTGGCAGCACCCAAATCTGCGTCGAACCAAT > NC_000913/3214810‑3215086 | tCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCAc < 2:800475/140‑1 (MQ=255) cAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCAcc > 2:843844/1‑140 (MQ=255) aGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCt > 2:708394/1‑140 (MQ=255) aTCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCttt > 2:168733/1‑140 (MQ=255) gaagcgaagGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCg < 2:1603184/140‑1 (MQ=255) gtatgggacaacttgtgaaattaccgacaagaagggaaagggccttcccgagagtggtaaaggagaggccctggaaataccccacagccccgaaaaagagccagtcagttgcttaactgactggcattaCACCTTTTCgg < 1:219748‑M1/11‑1 (MQ=255) tgggacaacttgtgaaattaccgacaagaagggaaagggccttcccgagagtggtaaaggagaggccctggaaataccccacagccccgaaaaagagccagtcagttgcttaactgactggcattacacctttttcgggg > 1:1588925‑M1/127‑134 (MQ=255) aGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaat > 1:602792‑M1/1‑136 (MQ=255) tGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgat < 1:1078013‑M1/140‑11 (MQ=255) tGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgat < 1:1427620‑M1/140‑11 (MQ=255) tGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgat < 1:735524‑M1/140‑11 (MQ=255) tgtgaaattaccgacaagaagggaaagggccttcccgagagtggtaaaggagaggccctggaaataccccacagccccgaaaaagagccagtcagttgcttaactgactggcattaCACCTTTTCGGTGGCGTTTTTTAt > 2:1298220‑M1/117‑140 (MQ=255) gcgcAAACTGCGTCCCCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatc < 2:662640‑M1/140‑12 (MQ=255) gcgcAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatc < 1:1008683‑M1/140‑12 (MQ=255) gcgcAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatc < 1:330692‑M1/140‑12 (MQ=255) gcgcAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatc < 1:1999‑M1/140‑12 (MQ=255) gcgcAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatc < 2:494903‑M1/140‑12 (MQ=255) gcgcAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatc < 2:1001953‑M1/140‑12 (MQ=255) gcgcAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTAt > 1:854247/1‑140 (MQ=255) cgcAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatca > 2:426083‑M1/1‑128 (MQ=255) gaaattaccgacaagaagggaaagggccttcccgagagtggtaaaggagaggccctggaaataccccacagccccgaaaaagagccagtcagttgcttaactgactggcattaCACCTTTTCGGTGGCGTTTTTTATCGc > 2:517535‑M1/114‑140 (MQ=255) cAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagt < 2:887557‑M1/140‑15 (MQ=255) attaccgacaagaagggaaagggccttcccgagagtggtaaaggagaggccctggaaataccccacagccccgaaaaagagccagtcagttgcttaactgactggcattaCACCTTTTCGGTGGCGTTTTTTATCGCCCa > 1:1163451‑M1/111‑140 (MQ=255) attaccgacaagaagggaaagggccttcacgagagtggtaaaggagaggccctggaaataccccacagccccgaaaaagagccagtcagttgcttaactgactggcattaCACCTTTTCGGTGGCGTTTTTTATCGCCCa > 2:1034084‑M1/111‑140 (MQ=255) tacgccacccgAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaagg < 1:391814‑M1/135‑20 (MQ=255) tGCGTCCCCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaagg < 2:1656264‑M1/140‑20 (MQ=255) gCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatc < 1:1150568‑M1/131‑12 (MQ=255) gCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatc > 2:1150568‑M1/1‑120 (MQ=255) ccgacaagaagggaaagggccttcccgagagtggtaaaggagaggccctggaaataccccacagccccgaaaaagagccagtcagttgcttaactgactggcattaCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCa > 1:351818‑M1/107‑140 (MQ=255) ccgacaagaagggaaagggccttcccgagagtggtaaaggagaggccctggaaataccccacagccccgaaaaagagccagtcagttgcttaactgactggcattaCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCa > 2:1634789‑M1/107‑140 (MQ=255) cGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggat < 2:602792‑M1/140‑22 (MQ=255) gTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgat < 1:309685‑M1/128‑11 (MQ=255) gTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgat > 2:309685‑M1/1‑118 (MQ=255) gTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATAAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggatc > 1:1497460‑M1/1‑118 (MQ=255) cACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggatcag < 1:1552527‑M1/140‑25 (MQ=255) cGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggatcagttga < 1:1341636‑M1/140‑29 (MQ=255) gAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggatcagttgac < 2:125894‑M1/140‑30 (MQ=255) gAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatc > 1:451907‑M1/1‑111 (MQ=255) gAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatc < 2:451907‑M1/122‑12 (MQ=255) aGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggatcagttgacc < 1:822497‑M1/140‑31 (MQ=255) aGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggatcagttgacc < 1:619188‑M1/140‑31 (MQ=255) aGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATAAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggatcagttgacc < 2:1497460‑M1/140‑31 (MQ=255) gCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTATGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAgcgc > 2:1448345/1‑140 (MQ=255) cTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggatcagttgaccgatccag < 1:426083‑M1/140‑38 (MQ=255) gAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCa < 1:1057919/140‑1 (MQ=255) aaGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggatcagttgaccgatccagtgg < 2:47333‑M1/140‑41 (MQ=255) aaGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggatcagttgaccgatccagtgg < 1:1319018‑M1/140‑41 (MQ=255) ttcccgagagtggtaaaggagaggccctggaaataccccacagccccgaaaaagagccagtcagttgcttaactgactggcattaCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCt < 1:224922‑M1/55‑1 (MQ=255) tgctgcGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggatcagttgaccgatccagtggctg < 1:1375782‑M1/140‑44 (MQ=255) ctgcGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggatcagttgaccgatccagtggctgtg > 1:810909‑M1/1‑95 (MQ=255) ctgcGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggatcagttgacc > 1:717612‑M1/1‑95 (MQ=255) ctgcGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggatcagttgacc < 1:597825‑M1/125‑31 (MQ=255) ctgcGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggatcagttgacc < 2:717612‑M1/125‑31 (MQ=255) ctgcGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggatcagttgacc > 2:597825‑M1/1‑95 (MQ=255) ctgcGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTcgc > 1:840769/1‑140 (MQ=255) gcGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggatcagttgaccgatccagtggctgtgta < 2:810909‑M1/140‑48 (MQ=255) agagtggtaaaggagaggccctggaaataccccacagccccgaaaaagagccagtcagttgcttaactgactggcattaCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGAt > 1:338186‑M1/80‑140 (MQ=255) cTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCt < 2:203962/140‑1 (MQ=255) gtaaaggagaggccctggaaataccccacagccccgaaaaagagccagtcagttgcttaactgactggcattaCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCtt < 1:91385‑M1/67‑1 (MQ=255) taaaggagaggccctggaaataccccacagccccgaaaaagagccagtcagttgcttaactgactggcattaCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTc < 1:1264218‑M1/68‑1 (MQ=255) cTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCaa < 1:843844/140‑1 (MQ=255) ggagaggccctggaaataccccacagccccgaaaaagagccagtcagttgcttaactgactggcattaCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAAcc > 2:224922‑M1/69‑140 (MQ=255) ggccctggaaataccccacagccccgaaaaagagccagtcagttgcttaactgactggcattaCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGttt < 2:1009219‑M1/77‑1 (MQ=255) ggccctggaaataccccacagccccgaaaaagagccagtcagttgcttaactgactggcattaCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGttt < 2:739120‑M1/77‑1 (MQ=255) ttAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTtc > 1:1512166/1‑140 (MQ=255) gccctggaaataccccacagccccgaaaaagagccagtcagttgcttaactgactggcattaCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTtc < 1:454551‑M1/78‑1 (MQ=255) gccctggaaataccccacagccccgaaaaagagccagtcagttgcttaactgactggcattaCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTtc < 1:792476‑M1/78‑1 (MQ=255) tAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCGCAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTtct > 2:959260/1‑140 (MQ=255) ccctggaaataccccacagccccgaaaaagagccagtcagttgcttaactgactggcattaCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTtct > 2:454551‑M1/62‑140 (MQ=255) ggCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGTCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTTCTCCAGTGaaa > 2:557781/1‑140 (MQ=255) ggCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggatcagttgaccgatccagtggctgtgtaagaatccggaaacgctcacttgtttccg > 2:1163203‑M1/1‑65 (MQ=255) ggCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggatcagttgaccgatccagtggctgtgtaagaatccggaaacgctcacttgtttccg > 1:754788‑M1/1‑65 (MQ=255) cGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTTCTCCAGTGAAAc > 1:473634/1‑138 (MQ=255) cGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTTCTCCAGTGAAAc < 2:473634/138‑1 (MQ=255) acagccccgaaaaagagccagtcagttgcttaactgactggcattaCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTTCTCCAGTGAAACGCGAc > 1:457400‑M1/47‑140 (MQ=255) tCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggatcagttgaccgatccagtggctgtgtaagaatccggaaacgctcacttgtttccggattttt < 2:805205‑M1/140‑83 (MQ=255) ccccgaaaaagagccagtcagttgcttaactgactggcattaCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTTCTCCAGTGAAACGCGACTTaa < 2:1433653‑M1/98‑1 (MQ=255) gCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggatcagttgaccgatccagtggctgtgtaagaatccggaaacgctcacttgtttccggatttttttat < 1:65376‑M1/140‑87 (MQ=255) gCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggatcagttgaccgatccagtggctgtgtaagaatccggaaacgctcacttgtttccggatttttttat < 1:1361513‑M1/140‑87 (MQ=255) gCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggatcagttgaccgatccagtggctgtgtaagaatccggaaacgctcacttgtttccggatttttttat > 2:648147‑M1/1‑54 (MQ=255) cccgaaaaagagccagtcagttgcttaactgactggcattaCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTTCTCCAGTGAAACGCGACTTaaa > 1:817851‑M1/42‑140 (MQ=255) cGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTTCTCCAGTGAAACGCGACTTAAAc > 1:949541/1‑140 (MQ=255) gaaaaagagccagtcagttgcttaactgactggcattaCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTTCTCCAGTGAAACGCGACTTAAACCg > 1:739120‑M1/39‑140 (MQ=255) aaaaagagccagtcagttgcttaactgactggcattaCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTTCTCCAGTGAAACGCGACTTAAACCGc > 2:219748‑M1/38‑140 (MQ=255) gccgcACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggatcagttgaccgatccagtggctgtgtaagaatccggaaacgctcacttgtttccggatttttttat > 2:1080944‑M1/1‑47 (MQ=255) gcACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggatcagttgaccgatccagtggctgtgtaagaatccggaaacgctcacttgtttccggatttttttatgcacattgga < 1:648147‑M1/140‑97 (MQ=255) gcACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTTCTCCAGTGAAACGCGACTTAAACCGCTGGGAt > 1:316466/1‑140 (MQ=255) cACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggatcagttgaccgatccagtggctgtgtaagaatccggaaacgctcacttgtttccggatttttttatgcacattggac < 2:754788‑M1/140‑98 (MQ=255) aCCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTTCTCCAGTGAAACGCGACTTAAACCGCTGGGAttt > 1:398621/1‑140 (MQ=255) ggCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTTCTCCAGTGAAACGCGACTTAAACCGCTGGGATTTGgca > 2:164512/1‑140 (MQ=255) ggCAATAGGCCCTCTGCACAAACGCCACCTTTTCGGTGtaatgccgatcagttaaggatcagttgaccgatccagtggctgtgtaagaagccggaaacgctcacttgtttccggatttttttatgcacattggacaggct > 2:1484705‑M1/1‑38 (MQ=255) ggCCCTCTGCACAAACGCCACCTTTTCGGCGtaatgccgatcagttaaggatcagttgaccgatccagtggctgtgtaagaatccggaaacgctcacttgtttccggatttttttatgcacattggacaggctcttgatc > 1:334579‑M1/1‑31 (MQ=255) aactgactggcattaCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTTCTCCAGTGAAACGCGACTTAAACCGCTGGGATTTGGCAGCACCCAAAt > 2:583511‑M1/16‑140 (MQ=255) aactgactggcattaCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTTCTCCAGTGAAACGCGACTTAAACCGCTGGGATTTGGCAGCACCCAAAt > 2:91385‑M1/16‑140 (MQ=255) tctGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTTCTCCAGTGAAACGCGACTTAAACCGCTGGGATTTGGCAGCACCCAAATCt > 1:108122/1‑140 (MQ=255) gactggcattaCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTTCTCCAGTGAAACGCGACTTAAACCGCTGGGATTTGGCAGCACCCAAATCTGc < 1:1042372‑M1/129‑1 (MQ=255) ctggcattaCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTTCTCCAGTGAAACGCGACTTAAACCGCTGGGATTTGGCAGCACCCAAATCTGCGt > 1:1009219‑M1/10‑140 (MQ=255) ctggcattaCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTTCTCCAGTGAAACACGACTTAAACCGCTGGGATTTGGCAGCACCCAAATCTGCGt > 1:1952‑M1/10‑140 (MQ=255) cGCCACCTTTTCGGTGtaatgccgatcagttaaggatcagttgaccgatccagtggctgtgtaagaatccggaaacgctcacttgtttccggatttttttatgcacattggacaggctcttgatctggtatcccgttacg > 2:554758‑M1/1‑16 (MQ=255) CACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTTCTCCAGTGAAACGCGACTTAAACCGCTGGGATTTGGCAGCACCCAAATCTGCGTCGAACCAAt < 2:944705‑M1/140‑1 (MQ=255) | TCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTTCTCCAGTGAAACGCGACTTAAACCGCTGGGATTTGGCAGCACCCAAATCTGCGTCGAACCAAT > NC_000913/3214810‑3215086 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |