BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,250,041	T→C	L120S (TTA→TCA)	yqjE →	conserved inner membrane protein YqjE

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,250,041	0	T	C	100.0%	358.5 / NA	101	L120S (TTA→TCA)	yqjE	conserved inner membrane protein YqjE
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (55/46); total (55/46)

Only 100 of 101 total aligned reads displayed.

GTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTGGATCTTTCCGCCAGTCGTCGTGAATGGCTGGA  >  NC_000913/3249908‑3250177

gTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCaaa                                                                                                                                    >  2:8367/1‑140 (MQ=255)

gTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCaaa                                                                                                                                    >  2:1249348/1‑140 (MQ=255)

       cGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCgg                                                                                                                             <  1:170556/140‑1 (MQ=255)

         cAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCa                                                                                                                           >  2:1614430/1‑140 (MQ=255)

          aaTATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAg                                                                                                                          <  1:446727/140‑1 (MQ=255)

           atatCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAg                                                                                                                          <  2:530316/139‑1 (MQ=255)

           atatCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAg                                                                                                                          >  1:530316/1‑139 (MQ=255)

               cGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAgctgct                                                                                                                     >  2:1574475/1‑140 (MQ=255)

               cGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAgctgct                                                                                                                     >  2:1276222/1‑140 (MQ=255)

                gCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTc                                                                                                                    >  1:758305/1‑140 (MQ=255)

                 ccTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCg                                                                                                                   <  2:1202842/140‑1 (MQ=255)

                   tGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCgag                                                                                                                 >  2:270875/1‑140 (MQ=255)

                     aaTGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCgagga                                                                                                               <  1:8367/140‑1 (MQ=255)

                      aTGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAgc                                                                                                                         >  1:1051853/1‑129 (MQ=255)

                      aTGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAgc                                                                                                                         <  2:1051853/129‑1 (MQ=255)

                      aTGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCgaggag                                                                                                              <  2:758305/140‑1 (MQ=255)

                       tGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCgaggagg                                                                                                             >  1:1452685/1‑140 (MQ=255)

                          gatgatTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGt                                                                                                          >  2:840376/1‑140 (MQ=255)

                           atgatTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTc                                                                                                         <  2:174213/140‑1 (MQ=255)

                             gatTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTccc                                                                                                       <  2:643534/140‑1 (MQ=255)

                               ttGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTccc                                                                                                       >  2:1331738/1‑138 (MQ=255)

                               ttGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTccc                                                                                                       <  1:1331738/138‑1 (MQ=255)

                               ttGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGt                                                                                                     >  1:981459/1‑140 (MQ=255)

                               ttGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGt                                                                                                     >  2:1644722/1‑140 (MQ=255)

                                tGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTg                                                                                                    <  2:433734/140‑1 (MQ=255)

                                 gCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGGTCGGCAGCTGCTCGAGGAGGAGTCCCGTGa                                                                                                   >  1:747447/1‑140 (MQ=255)

                                  ccaccaCCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAg                                                                                                  <  1:270875/140‑1 (MQ=255)

                                  ccaccaCCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAg                                                                                                  <  2:7143/140‑1 (MQ=255)

                                      caccGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGt                                                                                              <  2:1268645/140‑1 (MQ=255)

                                        ccGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTaa                                                                                            >  2:859920/1‑140 (MQ=255)

                                        ccGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTaa                                                                                            >  1:774045/1‑140 (MQ=255)

                                        ccGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTaa                                                                                            >  2:494914/1‑140 (MQ=255)

                                        ccGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTaa                                                                                            >  2:601082/1‑140 (MQ=255)

                                        ccGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTaa                                                                                            >  2:270173/1‑140 (MQ=255)

                                           tggtgTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGt                                                                                         >  1:1247352/1‑140 (MQ=255)

                                           tggtgTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGt                                                                                         <  1:322895/140‑1 (MQ=255)

                                           tggtgTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGt                                                                                         <  1:840376/140‑1 (MQ=255)

                                           tggtgTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGt                                                                                         <  1:998604/140‑1 (MQ=255)

                                             gtgtTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCg                                                                                       <  1:1249348/140‑1 (MQ=255)

                                                ttGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAAc                                                                                    <  1:1614430/140‑1 (MQ=255)

                                                 tgctgcTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACg                                                                                   <  1:270173/140‑1 (MQ=255)

                                                  gctgctACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACgg                                                                                  >  2:218144/1‑139 (MQ=255)

                                                   ctgctACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTg                                                                                 >  1:413305/1‑140 (MQ=255)

                                                    tgctACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGa                                                                                <  2:975414/140‑1 (MQ=255)

                                                      ctACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAac                                                                              >  1:479664/1‑140 (MQ=255)

                                                          tGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGa                                                                                <  1:845420/134‑1 (MQ=255)

                                                          tGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGa                                                                                >  2:845420/1‑134 (MQ=255)

                                                                 gATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGgcg                                                                   >  2:1024726/1‑140 (MQ=255)

                                                                 gATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGgcg                                                                   >  1:306767/1‑140 (MQ=255)

                                                                  aTTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGgcgc                                                                  >  1:1203723/1‑140 (MQ=255)

                                                                  aTTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGACCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGgcgc                                                                  >  1:38436/1‑140 (MQ=255)

                                                                       cGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGGTCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTg                                                             <  2:747447/140‑1 (MQ=255)

                                                                         gTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCt                                                           <  1:1277346/140‑1 (MQ=255)

                                                                         gTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCt                                                           <  2:479664/140‑1 (MQ=255)

                                                                            tCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAg                                                        >  2:223679/1‑140 (MQ=255)

                                                                                    cTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATcc                                                >  2:1131998/1‑140 (MQ=255)

                                                                                    cTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATcc                                                >  1:487589/1‑140 (MQ=255)

                                                                                    cTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGG‑GGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCa                                               >  1:861736/1‑140 (MQ=255)

                                                                                    cTACGTAAATCGCGTAAGTCTACGTTGCTGCACCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATcc                                                >  2:1347209/1‑140 (MQ=255)

                                                                                     tACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCa                                               >  1:404309/1‑140 (MQ=255)

                                                                                      aCGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAg                                              >  1:673396/1‑140 (MQ=255)

                                                                                      aCGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGG‑GGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGc                                             <  2:861736/140‑1 (MQ=255)

                                                                                       cGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCCGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGc                                             <  2:1452685/140‑1 (MQ=255)

                                                                                          aaaTCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGcaac                                          <  2:487589/140‑1 (MQ=255)

                                                                                           aaTCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGcaaca                                         <  1:601082/140‑1 (MQ=255)

                                                                                               gcgTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACgg                                     >  2:1374708/1‑140 (MQ=255)

                                                                                                 gTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGcaaca                                         >  2:913012/1‑134 (MQ=255)

                                                                                                 gTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGcaaca                                         <  1:25116/134‑1 (MQ=255)

                                                                                                 gTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGcaaca                                         >  2:25116/1‑134 (MQ=255)

                                                                                                 gTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGcaaca                                         <  1:913012/134‑1 (MQ=255)

                                                                                                 gTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGcaac                                          <  2:790586/133‑1 (MQ=255)

                                                                                                 gTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGcaac                                          >  1:790586/1‑133 (MQ=255)

                                                                                                 gTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCt                                   >  2:433098/1‑140 (MQ=255)

                                                                                                 gTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCt                                   >  2:33074/1‑140 (MQ=255)

                                                                                                   aaGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTgg                                 <  1:223679/140‑1 (MQ=255)

                                                                                                   aaGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTgg                                 >  1:37542/1‑140 (MQ=255)

                                                                                                   aaGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTgg                                 <  1:1574475/140‑1 (MQ=255)

                                                                                                   aaGTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTgg                                 <  2:737247/140‑1 (MQ=255)

                                                                                                     gTCTACGTTGCTGCGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTGGAt                               <  2:37542/140‑1 (MQ=255)

                                                                                                             tgctgcGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTGGATCTTTCCGc                       <  2:44050/140‑1 (MQ=255)

                                                                                                               ctgcGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTgg                                 <  2:200685/128‑1 (MQ=255)

                                                                                                               ctgcGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTgg                                 >  1:200685/1‑128 (MQ=255)

                                                                                                               ctgcGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTGGATCTTTCCGCCa                     >  1:78010/1‑140 (MQ=255)

                                                                                                                tgcGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTGGATCTTTCCGCCAg                    >  2:1596848/1‑140 (MQ=255)

                                                                                                                tgcGCCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTGGATCTTTCCGCCAg                    >  1:576761/1‑140 (MQ=255)

                                                                                                                  cgcCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTGGATCTTTCCGCCAgtc                  >  1:614591/1‑140 (MQ=255)

                                                                                                                   gcCATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTGGATCTTTCCGCCAgtcg                 <  2:981459/140‑1 (MQ=255)

                                                                                                                    ccATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTGGATCTTTCCGCCAgtcgt                >  1:14542/1‑140 (MQ=255)

                                                                                                                    ccATACACGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTGGATCTTTCCGCCAgtcgt                >  1:1293258/1‑140 (MQ=255)

                                                                                                                          acGCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTGGATCTTTCCGCCAGTCGTCGTGaa          <  1:218144/140‑1 (MQ=255)

                                                                                                                            gCCATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTGGATCTTTCCGCCAGTCGTCGTGAATg        >  2:212512/1‑140 (MQ=255)

                                                                                                                             ccATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTGGATCTTTCCGCCAGTCGTCGTGAATgg       <  2:413305/140‑1 (MQ=255)

                                                                                                                             ccATGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTGGATCTTTCCGCCAGTCGTCGTGAATgg       <  2:306767/140‑1 (MQ=255)

                                                                                                                                tGAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTGGATCTTTCCGCCAGTCGTCGTGAATGGCTg    <  1:1024726/140‑1 (MQ=255)

                                                                                                                                 gAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGCGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTGGATCTTTCCTCCAGTCTTCGTGAATGGCggg   >  2:1095599/1‑140 (MQ=255)

                                                                                                                                 gAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTGGATCTTTCCGCCAGTCGTCGTGAATGGCTgg   >  2:667973/1‑140 (MQ=255)

                                                                                                                                 gAGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTGGATCTTTCCGCCAGTCGTCGTGAATGGCTgg   >  2:1165400/1‑140 (MQ=255)

                                                                                                                                  aGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTGGATCTTTCCGCCAGTCGTCGTGAATGGCTGga  <  2:78010/140‑1 (MQ=255)

                                                                                                                                  aGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTGGATCTTTCCGCCAGTCGTCGTGAATGGCTGga  <  2:673396/140‑1 (MQ=255)

                                                                                                                                  aGTCAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTGGATCTTTCCGCCAGTCGTCGTGAATGGCTGga  <  2:614591/140‑1 (MQ=255)

GTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTGGATCTTTCCGCCAGTCGTCGTGAATGGCTGGA  >  NC_000913/3249908‑3250177

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`