BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,362,022	T→C	intergenic (+82/‑90)	gltF → / → yhcA	periplasmic protein GltF/putative fimbrial chaperone YhcA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,362,022	0	T	C	100.0%	405.1 / NA	113	intergenic (+82/‑90)	gltF/yhcA	periplasmic protein GltF/putative fimbrial chaperone YhcA
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (52/61); total (52/61)

Only 100 of 118 total aligned reads displayed.

TGATGAAACGATCAAACTGGATGGTAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGTCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAA  >  NC_000913/3361886‑3362158

tgatgaAACGATCAAACTGGATGGTAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCtt                                                                                                                                       >  1:1338675/1‑140 (MQ=255)

 gatgaAACGATCAAACTGGATGGTAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTa                                                                                                                                      <  1:1077416/140‑1 (MQ=255)

  atgaAACGATCAAACTGGATGGTAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTaa                                                                                                                                     >  2:1187280/1‑140 (MQ=255)

       aCGATCAAACTGGATGGTAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTaatcaat                                                                                                                                >  1:743998/1‑140 (MQ=255)

        cGATCAAACTGGATGGTAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTaatcaatc                                                                                                                               <  1:1589863/140‑1 (MQ=255)

          aTCAAACTGGATGGTAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAAtctc                                                                                                                             >  1:765498/1‑140 (MQ=255)

               aCTGGATGGTAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGc                                                                                                                        <  2:507221/140‑1 (MQ=255)

               aCTGGATGGTAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGc                                                                                                                        <  1:1613800/140‑1 (MQ=255)

                cTGGATGGTAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCa                                                                                                                       <  2:1498434/140‑1 (MQ=255)

                  ggATGGTAACGTCACTATCAGCGTTCAGTATTTATAAGTACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCaaa                                                                                                                     <  2:864448/140‑1 (MQ=255)

                  ggATGGTAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCaaa                                                                                                                     <  2:4390/140‑1 (MQ=255)

                  ggATGGTAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCaaa                                                                                                                     <  1:122762/140‑1 (MQ=255)

                  ggATGGTAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCaaa                                                                                                                     <  2:195248/140‑1 (MQ=255)

                    aTGGTAACGTCACTATCAGCGTTCTGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCaaa                                                                                                                     <  2:1469171/138‑1 (MQ=255)

                    aTGGTAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCaaa                                                                                                                     >  1:1469171/1‑138 (MQ=255)

                    aTGGTAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACa                                                                                                                   <  2:1103473/140‑1 (MQ=255)

                    aTGGTAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACa                                                                                                                   <  1:898451/140‑1 (MQ=255)

                    aTGGTAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACa                                                                                                                   <  2:476284/140‑1 (MQ=255)

                    aTGGTAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACa                                                                                                                   <  2:687021/140‑1 (MQ=255)

                    aTGGTAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACa                                                                                                                   <  1:657717/140‑1 (MQ=255)

                     tGGTAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCaaa                                                                                                                     <  2:1219242/137‑1 (MQ=255)

                     tGGTAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCaaa                                                                                                                     >  1:1219242/1‑137 (MQ=255)

                     tGGTAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAAAACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTaatcaatc                                                                                                                               <  1:952771/127‑1 (MQ=255)

                        tAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTg                                                                                                                >  1:936690/1‑139 (MQ=255)

                        tAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTg                                                                                                                <  2:936690/139‑1 (MQ=255)

                         aaCGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCa                                                                                                              <  2:346960/140‑1 (MQ=255)

                          aCGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCAt                                                                                                             >  1:184419/1‑140 (MQ=255)

                           cGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATa                                                                                                            >  1:215379/1‑140 (MQ=255)

                           cGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATa                                                                                                            >  1:684064/1‑140 (MQ=255)

                            gTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATaa                                                                                                           <  2:1543825/140‑1 (MQ=255)

                            gTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATaa                                                                                                           <  1:463291/140‑1 (MQ=255)

                            gTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATaa                                                                                                           <  2:684064/140‑1 (MQ=255)

                                cTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACata                                                                                                       <  1:1098951/140‑1 (MQ=255)

                                  aTCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACatata                                                                                                     <  2:546581/140‑1 (MQ=255)

                                   tCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACatatat                                                                                                    >  2:351799/1‑140 (MQ=255)

                                    cAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATAtt                                                                                                   <  2:184419/140‑1 (MQ=255)

                                    cAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATAtt                                                                                                   <  2:1650822/140‑1 (MQ=255)

                                      gCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTaa                                                                                                 >  2:449069/1‑140 (MQ=255)

                                      gCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTaa                                                                                                 <  2:1560110/140‑1 (MQ=255)

                                           cAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACa                                                                                               >  2:1659277/1‑137 (MQ=255)

                                           cAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACa                                                                                               <  1:1659277/137‑1 (MQ=255)

                                           cAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAata                                                                                            <  1:1388566/140‑1 (MQ=255)

                                           cAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAata                                                                                            >  1:74075/1‑140 (MQ=255)

                                           cAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAACCAATCTCATCGCAAACAGTGCATAACATATATTAACAata                                                                                            <  2:573758/140‑1 (MQ=255)

                                            aGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAatat                                                                                           >  2:394067/1‑140 (MQ=255)

                                              tATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGt                                                                                         >  2:664047/1‑140 (MQ=255)

                                                tttATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGttt                                                                                       <  1:1298156/140‑1 (MQ=255)

                                                 ttATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTc                                                                                      <  1:449069/140‑1 (MQ=255)

                                                     aaGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCg                                                                                  <  1:800451/140‑1 (MQ=255)

                                                     aaGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCg                                                                                  <  1:628842/140‑1 (MQ=255)

                                                        aaCTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGtta                                                                               >  2:75063/1‑140 (MQ=255)

                                                        aaCTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGtta                                                                               >  2:813563/1‑140 (MQ=255)

                                                        aaCTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGtta                                                                               >  1:1617132/1‑140 (MQ=255)

                                                        aaCTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGtta                                                                               >  1:926632/1‑140 (MQ=255)

                                                          cTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGttatt                                                                             >  2:57859/1‑140 (MQ=255)

                                                          cTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGttatt                                                                             >  1:1217600/1‑140 (MQ=255)

                                                              tAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATc                                                                         <  2:1217600/140‑1 (MQ=255)

                                                              tAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATc                                                                         <  1:931605/140‑1 (MQ=255)

                                                              tAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATc                                                                         <  1:931604/140‑1 (MQ=255)

                                                                     gTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCAttatta                                                                  >  1:246406/1‑140 (MQ=255)

                                                                     gTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCAttatta                                                                  >  2:642560/1‑140 (MQ=255)

                                                                      tttttatttttaCGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCg                                                                                  <  1:1083985/123‑1 (MQ=255)

                                                                        tttatttttaCGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAg                                                               >  1:10241/1‑140 (MQ=255)

                                                                        tttatttttaCGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAg                                                               <  2:1009541/140‑1 (MQ=255)

                                                                        tttatttttaCGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAg                                                               >  1:1284114/1‑140 (MQ=255)

                                                                              tttaCGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGttt                                                         <  1:568323/140‑1 (MQ=255)

                                                                                       tAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTaaa                                                <  1:580843/140‑1 (MQ=255)

                                                                                         aCCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATg                                              >  1:1614002/1‑140 (MQ=255)

                                                                                           cAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCt                                            <  1:813563/140‑1 (MQ=255)

                                                                                            aGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTc                                           <  2:1617132/140‑1 (MQ=255)

                                                                                              ttAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAg                                         <  1:1390495/140‑1 (MQ=255)

                                                                                               tAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGa                                        <  2:10241/140‑1 (MQ=255)

                                                                                               tAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGa                                        >  1:117445/1‑140 (MQ=255)

                                                                                                 gCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGaca                                      >  2:1529425/1‑140 (MQ=255)

                                                                                                  cTATAACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGacac                                     <  2:1040148/140‑1 (MQ=255)

                                                                                                     taACTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGACacatt                                  >  2:345409/1‑140 (MQ=255)

                                                                                                       aCTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGACacattac                                <  1:394067/140‑1 (MQ=255)

                                                                                                       aCTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGACacattac                                <  2:58964/140‑1 (MQ=255)

                                                                                                        cTCGGACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGACacattaca                               >  1:664861/1‑140 (MQ=255)

                                                                                                            gACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAg                                         <  2:389958/126‑1 (MQ=255)

                                                                                                            gACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAg                                         >  1:389958/1‑126 (MQ=255)

                                                                                                            gACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCa                           >  1:1432062/1‑140 (MQ=255)

                                                                                                            gACAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCa                           >  1:508037/1‑140 (MQ=255)

                                                                                                             aCAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCAc                          >  1:484084/1‑140 (MQ=255)

                                                                                                              cAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACt                         <  2:948453/140‑1 (MQ=255)

                                                                                                              cAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACt                         <  1:131033/140‑1 (MQ=255)

                                                                                                              cAGATTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACt                         <  1:642560/140‑1 (MQ=255)

                                                                                                                 aTTATGCCCTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTa                      >  1:1112600/1‑140 (MQ=255)

                                                                                                                         cTATGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATaac              <  2:117445/140‑1 (MQ=255)

                                                                                                                           aTGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATaacaa            >  2:60080/1‑140 (MQ=255)

                                                                                                                           aTGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATaacaa            >  2:1274788/1‑140 (MQ=255)

                                                                                                                           aTGACATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATaacaa            >  2:858062/1‑140 (MQ=255)

                                                                                                                           aTGACACGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTGTTTATaacaa            >  2:1021576/1‑140 (MQ=255)

                                                                                                                              aCATGGTCTGCATTAATCAATCCCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACAt         <  1:351799/140‑1 (MQ=255)

                                                                                                                               cATGGTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATc        >  2:1035377/1‑140 (MQ=255)

                                                                                                                                  ggTCTGCCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAAt     >  2:194290/1‑140 (MQ=255)

                                                                                                                                    tctgcctTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACAt         >  2:703471/1‑134 (MQ=255)

                                                                                                                                    tctgcctTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGa   >  2:476699/1‑140 (MQ=255)

                                                                                                                                    tctgcctTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGa   <  2:74075/140‑1 (MQ=255)

                                                                                                                                     ctgcctTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGaa  <  1:75063/140‑1 (MQ=255)

TGATGAAACGATCAAACTGGATGGTAACGTCACTATCAGCGTTCAGTATTTATAAGAACTTGTAATACAGTTTTTATTTTTACGCATTAACCAGTTAGCTATAACTCGGACAGATTATGCCCTATGACATGGTCTGTCTTAATCAATCTCATCGCAAACAGTGCATAACATATATTAACAATATGTTTCTGCGTTATTTATCATTATTACAGGAGTTTTAATTTAAATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAA  >  NC_000913/3361886‑3362158

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`