BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,772,322	T→C	R14R (CGT→CGC)	mtlA →	mannitol‑specific PTS enzyme IICBA component

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,772,322	0	T	C	100.0%	421.4 / NA	117	R14R (CGT→CGC)	mtlA	mannitol‑specific PTS enzyme IICBA component
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (58/59); total (58/59)

Only 100 of 117 total aligned reads displayed.

AGTATCTACAAGGTCCGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGTTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTGGCGAAGCTGGTCGGGCCGATGATCACTTATCTC  >  NC_000913/3772186‑3772457

aGTATCTACAAGGTCCGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTc                                                                                                                                      <  2:102892/140‑1 (MQ=255)

aGTATCTACAAGGTCCGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTc                                                                                                                                      <  1:1119307/140‑1 (MQ=255)

    tCTACAAGGTCCGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCa                                                                                                                                  <  1:277011/140‑1 (MQ=255)

     cTACAAGGTCCGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAg                                                                                                                                 <  1:1436184/140‑1 (MQ=255)

          aGGTCCGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACa                                                                                                                            <  2:1352588/140‑1 (MQ=255)

            gTCCGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCt                                                                                                                                    <  1:828661/130‑1 (MQ=255)

            gTCCGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATg                                                                                                                          >  2:235750/1‑140 (MQ=255)

            gTCCGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATg                                                                                                                          >  1:97266/1‑140 (MQ=255)

            gTCCGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATg                                                                                                                          >  2:1194793/1‑140 (MQ=255)

            gTCCGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATg                                                                                                                          >  1:308450/1‑140 (MQ=255)

             tCCGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCa                                                                                                                                  >  2:925068/1‑131 (MQ=255)

             tCCGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCa                                                                                                                                  <  1:925068/131‑1 (MQ=255)

              ccGGTTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGt                                                                                                                        >  2:210363/1‑140 (MQ=255)

              ccGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCt                                                                                                                                    >  2:1229268/1‑128 (MQ=255)

              ccGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCt                                                                                                                                    <  1:1229268/128‑1 (MQ=255)

              ccGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAg                                                                                                                                 <  1:1260171/131‑1 (MQ=255)

              ccGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAg                                                                                                                                 >  2:1260171/1‑131 (MQ=255)

              ccGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATgg                                                                                                                         >  1:1321959/1‑139 (MQ=255)

              ccGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGt                                                                                                                        >  2:618214/1‑140 (MQ=255)

              ccGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGt                                                                                                                        >  2:1197430/1‑140 (MQ=255)

              ccGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGt                                                                                                                        >  2:1075240/1‑140 (MQ=255)

              ccGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGt                                                                                                                        >  2:938336/1‑140 (MQ=255)

              ccGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGt                                                                                                                        >  2:1320332/1‑140 (MQ=255)

              ccGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGt                                                                                                                        >  2:657494/1‑140 (MQ=255)

              ccGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGt                                                                                                                        >  2:691502/1‑140 (MQ=255)

              ccGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGt                                                                                                                        >  1:489806/1‑140 (MQ=255)

              ccGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGt                                                                                                                        >  1:1107998/1‑140 (MQ=255)

              ccGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGACTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGt                                                                                                                        >  1:1564511/1‑140 (MQ=255)

               cGGCTACCTCTGCCGCCACATTAACAAAAACCCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTg                                                                                                                       <  2:1016318/140‑1 (MQ=255)

               cGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTg                                                                                                                       <  1:1197430/140‑1 (MQ=255)

               cGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTg                                                                                                                       <  2:804868/140‑1 (MQ=255)

                ggCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGa                                                                                                                      >  2:586647/1‑140 (MQ=255)

                      ctctGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCaa                                                                                                                >  1:339715/1‑140 (MQ=255)

                             gccACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCgg                                                                                                         <  2:1576542/140‑1 (MQ=255)

                                acaTTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGgcgc                                                                                                      >  2:749265/1‑140 (MQ=255)

                                         aaaaaCCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATcgc                                                                                             <  1:938336/140‑1 (MQ=255)

                                          aaaaCCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATcgcg                                                                                            <  2:1019255/140‑1 (MQ=255)

                                          aaaaCCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATcgcg                                                                                            <  2:953899/140‑1 (MQ=255)

                                          aaaaCCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATcgcg                                                                                            <  2:1220401/140‑1 (MQ=255)

                                          aaaaCCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATcgcg                                                                                            <  1:691502/140‑1 (MQ=255)

                                          aaaaCCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATcgcg                                                                                            <  2:1221815/140‑1 (MQ=255)

                                          aaaaCCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATcgcg                                                                                            <  1:1194793/140‑1 (MQ=255)

                                          aaaaCCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATcgcg                                                                                            <  2:308450/140‑1 (MQ=255)

                                           aaaCCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGt                                                                                           <  1:1075240/140‑1 (MQ=255)

                                           aaaCCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGt                                                                                           <  2:236959/140‑1 (MQ=255)

                                           aaaCCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGt                                                                                           <  2:273903/140‑1 (MQ=255)

                                           aaaCCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGt                                                                                           <  2:7669/140‑1 (MQ=255)

                                           aaaCCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGt                                                                                           <  1:981021/140‑1 (MQ=255)

                                           aaaCCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGt                                                                                           <  1:278681/140‑1 (MQ=255)

                                           aaaCCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGt                                                                                           <  1:1157561/140‑1 (MQ=255)

                                           aaaCCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGt                                                                                           <  1:1065084/140‑1 (MQ=255)

                                           aaaCCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCCTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGt                                                                                           <  1:810212/140‑1 (MQ=255)

                                                       tCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTAtcatca                                                                               <  1:1232102/140‑1 (MQ=255)

                                                       tCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTAtcatca                                                                               <  1:1320332/140‑1 (MQ=255)

                                                         cAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCAcc                                                                             <  1:492804/140‑1 (MQ=255)

                                                            ccTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACcgcg                                                                          <  2:1107998/140‑1 (MQ=255)

                                                            ccTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACcgcg                                                                          <  1:618214/140‑1 (MQ=255)

                                                              tGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGtt                                                                        >  2:468765/1‑140 (MQ=255)

                                                               gcgcGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGtta                                                                       >  2:1271766/1‑140 (MQ=255)

                                                                cgcgACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGttat                                                                      >  2:284853/1‑140 (MQ=255)

                                                                      aGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTc                                                                <  1:763348/140‑1 (MQ=255)

                                                                       agcaaCATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTcc                                                               >  2:1432932/4‑140 (MQ=255)

                                                                        cAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGGGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCa                                                              <  2:430056/140‑1 (MQ=255)

                                                                               aagaagGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGggt                                                       >  1:551305/1‑140 (MQ=255)

                                                                               aagaagGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCAACGCGTTATTTATTCCAACAgggg                                                       >  1:400982/1‑139 (MQ=255)

                                                                                    ggggTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTa                                                  <  1:210363/140‑1 (MQ=255)

                                                                                      ggTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTAcc                                                <  1:235750/140‑1 (MQ=255)

                                                                                       gtgtTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCg                                               >  2:214391/1‑140 (MQ=255)

                                                                                       gtgtTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCg                                               >  1:284519/1‑140 (MQ=255)

                                                                                       gtgtTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCg                                               >  2:1508172/1‑140 (MQ=255)

                                                                                        tgtTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGa                                              >  1:896367/1‑140 (MQ=255)

                                                                                          tttttATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAAc                                            >  2:1308134/1‑140 (MQ=255)

                                                                                           ttttATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAATATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAAc                                                            <  1:1451785/123‑1 (MQ=255)

                                                                                           ttttATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAAc                                                            >  2:1451785/1‑123 (MQ=255)

                                                                                                tGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACg                                      >  1:135462/1‑140 (MQ=255)

                                                                                                tGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACg                                      <  1:789669/140‑1 (MQ=255)

                                                                                                    aTCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTgg                                  >  2:904173/1‑140 (MQ=255)

                                                                                                    aTCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTgg                                  >  1:544951/1‑140 (MQ=255)

                                                                                                    aTCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTgg                                  >  1:1646333/1‑140 (MQ=255)

                                                                                                    aTCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTgg                                  >  1:81354/1‑140 (MQ=255)

                                                                                                    aTCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTgg                                  >  2:641793/1‑140 (MQ=255)

                                                                                                    aTCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGGGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCCgg                                  >  2:1208905/1‑140 (MQ=255)

                                                                                                     tCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTGGc                                 >  1:861005/1‑140 (MQ=255)

                                                                                                              aaGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTGGCGAAGCTGGt                        <  2:81354/140‑1 (MQ=255)

                                                                                                              aaGATCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTGGCGAAGCTGGt                        <  2:639188/140‑1 (MQ=255)

                                                                                                                 aTCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTGGCGAAGCTGGTCgg                     >  2:1643646/1‑140 (MQ=255)

                                                                                                                 aTCAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTGGCGAAGCTGGTCgg                     >  1:1283188/1‑140 (MQ=255)

                                                                                                                   cAAAGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTGGCGAAGCTGGTCGGGc                   >  2:954087/1‑140 (MQ=255)

                                                                                                                    aaaGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTGGCGAAGCTGGTCGGGcc                  >  2:1343326/1‑140 (MQ=255)

                                                                                                                     aaGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTGGCGAAGCTGGTCGGGCCg                 >  1:1434020/1‑140 (MQ=255)

                                                                                                                     aaGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTGGCGAAGCTGGTCGGGCCg                 <  1:1643646/140‑1 (MQ=255)

                                                                                                                      aGTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTGGCGAAGCTGGTCGGGCCga                >  2:1425807/1‑140 (MQ=255)

                                                                                                                       gTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTGGCGAAGCTGGTCGGGCCgat               <  2:284519/140‑1 (MQ=255)

                                                                                                                       gTGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTGGCGAAGCTGGTCGGGCCgat               <  2:1283188/140‑1 (MQ=255)

                                                                                                                        tGCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTGGCGAAGCTGGTCGGGCCgatg              <  2:1295673/140‑1 (MQ=255)

                                                                                                                         gCAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTGGCGAAGCTGGTCGGGCCgatga             <  1:904173/140‑1 (MQ=255)

                                                                                                                          cAAAGCTTTGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGAGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTGGCGAAGCTGGTCGGGCCgatgat            >  1:1110508/1‑140 (MQ=255)

                                                                                                                                  tGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTGGCGAAGCTGGTCGGGCCGATGATCACTTAtc    >  2:661033/1‑140 (MQ=255)

                                                                                                                                  tGGTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTGGCGAAGCTGGTCGGGCCGATGATCACTTAtc    >  1:177402/1‑140 (MQ=255)

                                                                                                                                    gTCGCTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTGGCGAAGCTGGTCGGGCCGATGATCACTTAtctc  >  2:810155/1‑140 (MQ=255)

AGTATCTACAAGGTCCGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACAGCAAACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGTTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTGGCGAAGCTGGTCGGGCCGATGATCACTTATCTC  >  NC_000913/3772186‑3772457

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`