BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,794,733	T→C	A249A (GCT→GCC)	rfaD →	ADP‑L‑glycero‑D‑mannoheptose 6‑epimerase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,794,733	0	T	C	100.0%	380.1 / NA	106	A249A (GCT→GCC)	rfaD	ADP‑L‑glycero‑D‑mannoheptose 6‑epimerase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (50/56); total (50/56)

Only 100 of 108 total aligned reads displayed.

GCGAGAACTTCAAACGCGACTTCGTCTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCTACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACAAATCTGCGCGCGGCGGGTTACGACAAACCGTTCAA  >  NC_000913/3794597‑3794864

gCGAGAACTTCAAACGCGACTTCGTCTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACg                                                                                                                                  >  1:495781/1‑140 (MQ=255)

gCGAGAACTTCAAACGCGACTTCGTCTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACg                                                                                                                                  <  1:516428/140‑1 (MQ=255)

gCGAGAACTTCAAACGCGACTTCGTCTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACg                                                                                                                                  <  2:236080/140‑1 (MQ=255)

gCGAGAACTTCAAACGCGACTTCGTCTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACg                                                                                                                                  >  2:1539010/1‑140 (MQ=255)

gCGAGAACTTCAAACGCGACTTCGTCTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACg                                                                                                                                  >  1:650827/1‑140 (MQ=255)

gCGAGAACTTCAAACGCGACTTCGTCTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACg                                                                                                                                  <  2:1310313/140‑1 (MQ=255)

     aaCTTCAAACGCGACTTCGTCTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGc                                                                                                                             <  1:1298566/140‑1 (MQ=255)

      aCTTCAAACGCGACTTCGTCTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCt                                                                                                                            <  2:1297348/140‑1 (MQ=255)

      aCTTCAAACGCGACTTCGTCTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCt                                                                                                                            <  1:1484264/140‑1 (MQ=255)

       cTTCAAACGCGACTTCGTCTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAGTCCTTCCAGGCGGTAGCTGATGCCACGCTGGCtt                                                                                                                           >  1:332951/1‑140 (MQ=255)

       cTTCAAACGCGACTTCGTCTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCtt                                                                                                                           <  2:1628726/140‑1 (MQ=255)

               gcgACTTCGTCTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAg                                                                                                                   >  2:313722/1‑140 (MQ=255)

                cgACTTCGTCTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGa                                                                                                                  >  2:444321/1‑140 (MQ=255)

                  aCTTCGTCTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGaaa                                                                                                                >  2:1458504/1‑140 (MQ=255)

                  aCTTCGTCTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGaaa                                                                                                                >  1:483418/1‑140 (MQ=255)

                  aCTTCGTCTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGaaa                                                                                                                >  2:635987/1‑140 (MQ=255)

                    ttCGTCTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAgg                                                                                                              <  1:1388871/140‑1 (MQ=255)

                     tCGTCTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGTATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGc                                                                                                             <  1:91309/140‑1 (MQ=255)

                      cGTCTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGcc                                                                                                            <  1:313722/140‑1 (MQ=255)

                      cGTCTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGcc                                                                                                            <  1:324936/140‑1 (MQ=255)

                      cGTCTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGcc                                                                                                            <  1:1539010/140‑1 (MQ=255)

                      cGTCTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGcc                                                                                                            <  2:757612/140‑1 (MQ=255)

                      cGTCTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGcc                                                                                                            <  2:935830/140‑1 (MQ=255)

                         cTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGa                                                                                                         >  1:1142278/1‑140 (MQ=255)

                          tATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGAt                                                                                                        <  1:1458504/140‑1 (MQ=255)

                          tATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGAt                                                                                                        <  2:1658101/140‑1 (MQ=255)

                          tATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGAt                                                                                                        <  2:1142278/140‑1 (MQ=255)

                           aTGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATc                                                                                                       >  2:578383/1‑140 (MQ=255)

                           aTGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATc                                                                                                       <  1:1544606/140‑1 (MQ=255)

                                ggCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATa                                                                                                  >  2:1590006/1‑140 (MQ=255)

                                  cGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACa                                                                                                >  2:473465/1‑140 (MQ=255)

                                    aCGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACAtt                                                                                              <  2:508721/140‑1 (MQ=255)

                                     cGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGAt                                                                                                        >  2:842930/1‑129 (MQ=255)

                                     cGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGAt                                                                                                        >  2:844736/1‑129 (MQ=255)

                                     cGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGAt                                                                                                        <  1:844736/129‑1 (MQ=255)

                                     cGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGAt                                                                                                        <  1:842930/129‑1 (MQ=255)

                                      gTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGc                                                                                                             >  1:179609/1‑123 (MQ=255)

                                               gtgAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGa                                                                                   <  1:669170/140‑1 (MQ=255)

                                                tgAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGAt                                                                                  >  1:1208575/1‑140 (MQ=255)

                                                 gAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATa                                                                                 <  2:1647098/140‑1 (MQ=255)

                                                   aTCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCgg                                                                                    >  1:1150691/1‑135 (MQ=255)

                                                   aTCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCgg                                                                                    <  2:1150691/135‑1 (MQ=255)

                                                   aTCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATaaa                                                                               >  1:888190/1‑140 (MQ=255)

                                                    tCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAAc                                                                              >  2:167795/1‑140 (MQ=255)

                                                       gtgGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGa                                                                           >  2:21146/1‑140 (MQ=255)

                                                       gtgGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGa                                                                           <  1:1590006/140‑1 (MQ=255)

                                                        tgGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGaa                                                                          >  2:1156953/1‑140 (MQ=255)

                                                          gTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAg                                                                        >  1:1471842/1‑140 (MQ=255)

                                                          gTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAg                                                                        >  2:1187063/1‑140 (MQ=255)

                                                            tCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGc                                                                      >  1:529871/1‑140 (MQ=255)

                                                             ccTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGcc                                                                     >  1:1343747/1‑140 (MQ=255)

                                                             ccTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGcc                                                                     >  1:605062/1‑140 (MQ=255)

                                                               tGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGc                                                                   >  1:495477/1‑140 (MQ=255)

                                                                ggAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCt                                                                  >  1:473150/1‑140 (MQ=255)

                                                                  aaaaTGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTAt                                                                <  2:845164/140‑1 (MQ=255)

                                                                  aaaaTGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTAt                                                                <  2:529871/140‑1 (MQ=255)

                                                                    aaTGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCa                                                              >  2:1147687/1‑140 (MQ=255)

                                                                        gCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCg                                                          <  1:473465/140‑1 (MQ=255)

                                                                        gCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCg                                                          <  2:1208575/140‑1 (MQ=255)

                                                                        gCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCg                                                          <  2:133268/140‑1 (MQ=255)

                                                                        gCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCg                                                          <  1:1155883/140‑1 (MQ=255)

                                                                        gCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACCCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCg                                                          <  1:1080236/140‑1 (MQ=255)

                                                                          gTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGtt                                                        <  2:1343747/140‑1 (MQ=255)

                                                                          gTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGtt                                                        <  1:673063/140‑1 (MQ=255)

                                                                             tCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCAc                                                     <  2:14363/140‑1 (MQ=255)

                                                                              ccGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACt                                                    <  1:167795/140‑1 (MQ=255)

                                                                              ccGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACt                                                    <  1:635987/140‑1 (MQ=255)

                                                                                 gCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAg                                                 <  1:1147687/140‑1 (MQ=255)

                                                                                 gCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAg                                                 <  1:1153136/140‑1 (MQ=255)

                                                                                 gCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAg                                                 <  2:1024560/140‑1 (MQ=255)

                                                                                  cATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAgg                                                <  2:473150/140‑1 (MQ=255)

                                                                                    tCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCa                                              <  1:21146/140‑1 (MQ=255)

                                                                                       tCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGAt                                           >  1:721101/1‑140 (MQ=255)

                                                                                       tCAATCCCGGTACTGGGCGTGCGGAATCCTTCCAGTCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGACCGAATACATTCCGTTCCCGGATAAACTCAAAGGCCGCTATCAGGCGTTCACTCAGGCAGAt                                           >  2:1221252/1‑140 (MQ=255)

                                                                                        cAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCa                                              >  1:83792/1‑136 (MQ=255)

                                                                                        cAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCa                                              <  2:83792/136‑1 (MQ=255)

                                                                                              cGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACaa                                    >  1:233241/1‑140 (MQ=255)

                                                                                                gTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACAAAt                                  >  1:540363/1‑140 (MQ=255)

                                                                                                gTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACAAAt                                  >  2:1552048/1‑140 (MQ=255)

                                                                                                     ggTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACAAATCTgcg                             >  1:801769/1‑140 (MQ=255)

                                                                                                      gTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACAAATCTgcgc                            >  1:25677/1‑140 (MQ=255)

                                                                                                      gTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACAAATCTgcgc                            >  2:1154144/1‑140 (MQ=255)

                                                                                                         gTGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACAAATCTGcgcgcg                         >  2:465070/1‑140 (MQ=255)

                                                                                                          tGCGGAATCCTTCCAGGTGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACAAATCTGCGCgcgg                        <  1:1156953/140‑1 (MQ=255)

                                                                                                          tGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACAAATCTGCGCgcgg                        >  2:339964/1‑140 (MQ=255)

                                                                                                          tGCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACAAATCTGCGCgcgg                        <  2:721101/140‑1 (MQ=255)

                                                                                                           gCGGAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACAAATCTGCGCgcggc                       >  1:1326084/1‑140 (MQ=255)

                                                                                                              gAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACAAATCTGCGCGCGGCggg                    <  2:25677/140‑1 (MQ=255)

                                                                                                              gAATCCTTCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACAAATCTGCGCGCGGCggg                    <  2:888190/140‑1 (MQ=255)

                                                                                                                    ttCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACAAATCTGCGCGCGGCGGGTTACGa              >  2:1609263/1‑140 (MQ=255)

                                                                                                                     tCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACAAATCTGCGCGCGGCggg                    <  1:1276992/133‑1 (MQ=255)

                                                                                                                     tCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACAAATCTGCGCGCGGCggg                    >  2:1276992/1‑133 (MQ=255)

                                                                                                                     tCCAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACAAATCTGCGCGCGGCGGGTTACGAc             >  2:564312/1‑140 (MQ=255)

                                                                                                                      ccAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACAAATCTGCGCGCGGCGGGTTACGACa            <  2:540363/140‑1 (MQ=255)

                                                                                                                      ccAGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACAAATCTGCGCGCGGCGGGTTACGACa            <  1:465070/140‑1 (MQ=255)

                                                                                                                        aGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACAAATCTGCGCGCGGCGGGTTACGACaaa          <  1:564312/140‑1 (MQ=255)

                                                                                                                        aGGCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACAAATCTGCGCGCGGCGGGTTACGACaaa          <  2:826561/140‑1 (MQ=255)

                                                                                                                         ggCGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACAAATCTGCGCGCGGCGGGTTACGACAAAc         >  2:1204932/1‑140 (MQ=255)

                                                                                                                           cGGTAGCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACAAATCTGCGCGCGGCGGGTTACGACAAACCg       >  1:1613682/1‑140 (MQ=255)

                                                                                                                                gCTGATGCCACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACAAATCTGCGCGCGGCGGGTTACGACAAACCGTTCaa  <  2:299794/140‑1 (MQ=255)

GCGAGAACTTCAAACGCGACTTCGTCTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCTACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACAAATCTGCGCGCGGCGGGTTACGACAAACCGTTCAA  >  NC_000913/3794597‑3794864

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`