BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,519,416	C→T	L303L (CTG→CTA)	yjhU ←	KpLE2 phage‑like element; putative DNA‑binding transcriptional regulator YjhU

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,519,416	0	C	T	100.0%	534.7 / NA	149	L303L (CTG→CTA)	yjhU	KpLE2 phage‑like element; putative DNA‑binding transcriptional regulator YjhU
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (72/77); total (72/77)

Only 100 of 149 total aligned reads displayed.

ATCGCCGCTAATCAATAAAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCCCTTCCTTG  >  NC_000913/4519280‑4519551

atCGCCGCTAATCAATAAAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAgg                                                                                                                                      <  1:703892/140‑1 (MQ=255)

  cgccgcTAATCAATAAAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGc                                                                                                                                    >  1:903355/1‑140 (MQ=255)

  cgccgcTAATCAATAAAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGc                                                                                                                                    >  1:432981/1‑140 (MQ=255)

  cgccgcTAATCAATAAAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGc                                                                                                                                    >  2:1357641/1‑140 (MQ=255)

  cgccgcTAATCAATAAAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGc                                                                                                                                    >  1:981027/1‑140 (MQ=255)

      gcTAATCAATAAAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCAccc                                                                                                                                <  2:418836/140‑1 (MQ=255)

           tCAATAAAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGATCCGTGACATATCCTCCCAGTAGGGCACCCaa                                                                                                                              >  1:1461221/1‑137 (MQ=255)

           tCAATAAAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGATCCGTGACATATCCTCCCAGTAGGGCACCCaa                                                                                                                              <  2:1461221/137‑1 (MQ=255)

            cAATAAAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGtt                                                                                                                          <  1:1357641/140‑1 (MQ=255)

              aTAAAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGc                                                                                                                        <  1:1417463/140‑1 (MQ=255)

                   aTCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCAt                                                                                                                   <  2:1177655/140‑1 (MQ=255)

                    tCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATa                                                                                                                  >  1:1286363/1‑140 (MQ=255)

                    tCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATa                                                                                                                  >  2:39797/1‑140 (MQ=255)

                        gCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCct                                                                                                              >  2:125690/1‑140 (MQ=255)

                        gCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCct                                                                                                              <  1:198402/140‑1 (MQ=255)

                         ccccATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCctc                                                                                                             >  1:578478/1‑140 (MQ=255)

                          cccATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCctct                                                                                                            <  2:159653/140‑1 (MQ=255)

                              tatCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCtt                                                                                                           >  1:1537662/1‑137 (MQ=255)

                              tatCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCtt                                                                                                           <  2:1537662/137‑1 (MQ=255)

                              tatCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTcc                                                                                                        >  1:1293046/1‑140 (MQ=255)

                                    cATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCccacca                                                                                                  >  2:55873/1‑140 (MQ=255)

                                        gggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGcta                                                                                              >  2:1124997/1‑138 (MQ=255)

                                        gggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCaa                                                                                              <  2:432981/140‑1 (MQ=255)

                                        gggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCaa                                                                                              <  2:626770/140‑1 (MQ=255)

                                         ggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCct                                                                                                              <  1:645329/123‑1 (MQ=255)

                                         ggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCct                                                                                                              >  2:645329/1‑123 (MQ=255)

                                         ggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTcccc                                                                                                      >  1:1098332/1‑131 (MQ=255)

                                         ggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTccc                                                                                                       >  1:33500/1‑130 (MQ=255)

                                         ggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTccc                                                                                                       <  2:33500/130‑1 (MQ=255)

                                         ggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAg                                                                                                 <  2:602070/136‑1 (MQ=255)

                                         ggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAg                                                                                                 >  2:1288422/1‑136 (MQ=255)

                                         ggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAg                                                                                                 <  1:1288422/136‑1 (MQ=255)

                                         ggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAg                                                                                             >  2:52616/1‑140 (MQ=255)

                                         ggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAg                                                                                             >  1:819513/1‑140 (MQ=255)

                                         ggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAg                                                                                             >  2:913427/1‑140 (MQ=255)

                                         ggCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAg                                                                                             >  2:755884/1‑140 (MQ=255)

                                          gCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCaa                                                                                              <  2:1116738/138‑1 (MQ=255)

                                          gCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCaa                                                                                              >  1:1116738/1‑138 (MQ=255)

                                          gCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAgg                                                                                            <  1:1483767/140‑1 (MQ=255)

                                          gCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAgg                                                                                            <  1:762061/140‑1 (MQ=255)

                                            aGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGaa                                                                                          >  1:724984/1‑140 (MQ=255)

                                             gttgttCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAg                                                                                         <  1:1589348/140‑1 (MQ=255)

                                                 ttCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCt                                                                                     <  1:258735/140‑1 (MQ=255)

                                                   cATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTc                                                                                   >  2:1474949/1‑140 (MQ=255)

                                                     ttCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCg                                                                                 <  2:724984/140‑1 (MQ=255)

                                                          ttAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCaa                                                                            >  1:627494/1‑140 (MQ=255)

                                                          ttAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCaa                                                                            <  1:756359/140‑1 (MQ=255)

                                                           tAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAAt                                                                           <  1:1007659/140‑1 (MQ=255)

                                                           tAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAAt                                                                           <  1:1512534/140‑1 (MQ=255)

                                                            aGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATc                                                                          <  1:1474949/140‑1 (MQ=255)

                                                            aGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATc                                                                          <  1:371933/140‑1 (MQ=255)

                                                              tgtgGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCaa                                                                            <  2:1501592/136‑1 (MQ=255)

                                                              tgtgGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCaa                                                                            >  1:1501592/1‑136 (MQ=255)

                                                               gtgGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGc                                                                       <  2:311300/140‑1 (MQ=255)

                                                                tgGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGcc                                                                      >  2:1031884/1‑140 (MQ=255)

                                                                tgGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGcc                                                                      <  2:819513/140‑1 (MQ=255)

                                                                tgGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGcc                                                                      >  2:201003/1‑140 (MQ=255)

                                                                tgGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGcc                                                                      >  2:1413700/1‑140 (MQ=255)

                                                                  gTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAAt                                                                           <  2:375441/133‑1 (MQ=255)

                                                                  gTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAAt                                                                           >  1:375441/1‑133 (MQ=255)

                                                                    aaTTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAg                                                                  <  1:913427/140‑1 (MQ=255)

                                                                          cacGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCGATCTGCCTTAGCTGAGc                                                            >  1:501863/1‑140 (MQ=255)

                                                                          cacGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCt                                                                <  2:822367/136‑1 (MQ=255)

                                                                            cGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAg                                                             <  1:460274/137‑1 (MQ=255)

                                                                            cGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAg                                                             >  2:460274/1‑137 (MQ=255)

                                                                            cGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCa                                                          >  2:1153701/1‑140 (MQ=255)

                                                                             gCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAAt                                                                           <  2:164905/122‑1 (MQ=255)

                                                                             gCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAAt                                                                           >  1:164905/1‑122 (MQ=255)

                                                                              ccAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGa                                                        <  2:1514129/140‑1 (MQ=255)

                                                                                 gCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTg                                                     <  1:970143/140‑1 (MQ=255)

                                                                                  cAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGa                                                    <  2:1317233/140‑1 (MQ=255)

                                                                                   aaaaaCTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGAt                                                   <  1:729161/140‑1 (MQ=255)

                                                                                     aaaCTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTc                                                 <  2:559930/140‑1 (MQ=255)

                                                                                     aaaCTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTc                                                 <  1:416148/140‑1 (MQ=255)

                                                                                     aaaCTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTc                                                 <  1:633915/140‑1 (MQ=255)

                                                                                     aaaCTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTc                                                 <  2:627494/140‑1 (MQ=255)

                                                                                     aaaCTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTc                                                 <  1:1153701/140‑1 (MQ=255)

                                                                                            gCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAAt                                          >  1:1240676/1‑140 (MQ=255)

                                                                                               gTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGa                                                    >  2:587229/1‑127 (MQ=255)

                                                                                               gTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGa                                                    <  1:587229/127‑1 (MQ=255)

                                                                                               gTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACg                                       <  1:611916/140‑1 (MQ=255)

                                                                                                  ccTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTg                                    >  1:701795/1‑140 (MQ=255)

                                                                                                    ttCATCAACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGt                                  <  2:1287155/140‑1 (MQ=255)

                                                                                                     tcatcaACAATCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTc                                 <  2:929039/140‑1 (MQ=255)

                                                                                                         caacaaTCAGGTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACa                             <  1:125690/140‑1 (MQ=255)

                                                                                                                   gTCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGCAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCacga                   >  2:1503053/1‑140 (MQ=255)

                                                                                                                    tCCGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCacgac                  >  1:1011386/1‑140 (MQ=255)

                                                                                                                     ccGTGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCacgacg                 <  2:701795/140‑1 (MQ=255)

                                                                                                                        tGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGc              >  1:808968/1‑140 (MQ=255)

                                                                                                                        tGACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGc              >  1:654305/1‑140 (MQ=255)

                                                                                                                         gACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCacg                    >  1:295003/1‑133 (MQ=255)

                                                                                                                         gACATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCa             <  1:1030095/140‑1 (MQ=255)

                                                                                                                          aCATATCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCAt            <  2:1011386/140‑1 (MQ=255)

                                                                                                                             tatCCTCCCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACggg               <  1:619369/134‑1 (MQ=255)

                                                                                                                                cctccCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCccttc      >  2:1432677/1‑140 (MQ=255)

                                                                                                                                 ctccCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCccttcc     <  2:1265226/140‑1 (MQ=255)

                                                                                                                                  tccCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCccttcct    <  2:6719/140‑1 (MQ=255)

                                                                                                                                  tccCAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCccttcct    <  2:71037/140‑1 (MQ=255)

                                                                                                                                   cccAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCccttcct    <  2:293156/139‑1 (MQ=255)

                                                                                                                                    ccAGTAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCCCTTCCTTg  >  2:1031714/1‑140 (MQ=255)

ATCGCCGCTAATCAATAAAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCCCTTCCTTG  >  NC_000913/4519280‑4519551

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`