BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,548,170	A→G	K143K (AAA→AAG)	fimF →	type 1 fimbriae minor subunit FimF

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,548,170	0	A	G	100.0%	448.8 / NA	125	K143K (AAA→AAG)	fimF	type 1 fimbriae minor subunit FimF
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (64/61); total (64/61)

Only 100 of 127 total aligned reads displayed.

CCAACCTGCTTGCACTTGAAAATACGGTGTCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGTAACTGGAGATGCTCATGAAATGGTGCAAACGTGGG  >  NC_000913/4548034‑4548305

cccaCCTGCTTGCACTTTAAAAAAAGGGGTCAGCGGGCTCGGGGCTGGGGATACAGCTTCTGAATGAGCAGCAAAAACAAAAAACCCTTAATGCTCCATCCTCCCCGCCTTCGTGGACGACCCCGACGCCGGGGAAGccc                                                                                                                                      >  2:1185403/4‑139 (MQ=255)

ccAACCTGCTTGCACTTGAAAATACGGTGTCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCa                                                                                                                                      <  2:378504/140‑1 (MQ=255)

 cAACCTGCTTGCACTTGAAAATACGGTGTCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCaa                                                                                                                                     >  2:167953/1‑140 (MQ=255)

        cTTGCACTTTAAAATACGGTGTCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCt                                                                                                                              >  1:151211/1‑140 (MQ=255)

        cTTGCACTTGAAAATACGGTGTCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCt                                                                                                                              >  2:146842/1‑140 (MQ=255)

          tGCACTTGAAAATACGGTGTCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGa                                                                                                                            >  2:346858/1‑140 (MQ=255)

                tGAAAATACGGTGTCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAAttttt                                                                                                                      >  1:619532/1‑140 (MQ=255)

                      tACGGTGTCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGccc                                                                                                                <  1:850292/140‑1 (MQ=255)

                           tgtCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTa                                                                                                           >  2:1150818/1‑140 (MQ=255)

                           tgtCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTa                                                                                                           >  2:224362/1‑140 (MQ=255)

                           tgtCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTa                                                                                                           >  2:51618/1‑140 (MQ=255)

                             tCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAAt                                                                                                         <  1:167953/140‑1 (MQ=255)

                             tCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTCACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAAt                                                                                                         >  1:1286156/1‑140 (MQ=255)

                               aGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAACCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATgg                                                                                                       >  2:835034/1‑140 (MQ=255)

                                gCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGc                                                                                                      >  2:1077237/1‑140 (MQ=255)

                                   gCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGac                                                                                                   <  2:563884/140‑1 (MQ=255)

                                     ttCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGacac                                                                                                 >  2:380111/1‑140 (MQ=255)

                                     ttCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGacac                                                                                                 <  1:380111/140‑1 (MQ=255)

                                       cGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAg                                                                                               <  1:51618/140‑1 (MQ=255)

                                       cGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAg                                                                                               <  1:346858/140‑1 (MQ=255)

                                               ggAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGt                                                                                       <  1:826311/140‑1 (MQ=255)

                                                    aCAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTg                                                                                  >  1:673819/1‑140 (MQ=255)

                                                      aGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCg                                                                                <  2:950605/140‑1 (MQ=255)

                                                      aGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCg                                                                                <  2:950604/140‑1 (MQ=255)

                                                       gCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCgg                                                                               >  2:1612144/1‑140 (MQ=255)

                                                        cgtCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCggg                                                                              >  1:1094246/3‑140 (MQ=255)

                                                         ttCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCgggg                                                                             >  2:429990/1‑140 (MQ=255)

                                                         ttCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCgggg                                                                             >  2:1618172/1‑140 (MQ=255)

                                                         ttCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCgggg                                                                             >  1:1264023/1‑140 (MQ=255)

                                                         ttCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCgggg                                                                             >  2:1341434/1‑140 (MQ=255)

                                                         ttCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCgggg                                                                             <  1:533743/140‑1 (MQ=255)

                                                         ttCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCg                                                                                >  1:1049706/1‑137 (MQ=255)

                                                         ttCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCg                                                                                <  2:1049706/137‑1 (MQ=255)

                                                          tCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGc                                                                            <  1:172030/140‑1 (MQ=255)

                                                          tCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGc                                                                            >  2:172030/1‑140 (MQ=255)

                                                                tGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCa                                                                      >  1:1164459/1‑140 (MQ=255)

                                                                tGAGCAGCAAAATC‑AATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCaa                                                                     >  1:717801/1‑140 (MQ=255)

                                                                  agcagcAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTg                                                                                  >  2:915909/1‑126 (MQ=255)

                                                                  agcagcAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAAt                                                                    >  1:1052414/1‑140 (MQ=255)

                                                                   gcagcaAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATg                                                                   <  1:842504/140‑1 (MQ=255)

                                                                    cagcaAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGc                                                                  >  2:614406/1‑140 (MQ=255)

                                                                    cagcaAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGc                                                                  >  2:1627158/1‑140 (MQ=255)

                                                                    cagcaAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGc                                                                  >  1:1367277/1‑140 (MQ=255)

                                                                     agcaAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGcc                                                                 >  2:1345382/1‑140 (MQ=255)

                                                                       caAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCAc                                                               >  1:923922/1‑140 (MQ=255)

                                                                        aaaaTCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACg                                                              >  1:1062068/1‑140 (MQ=255)

                                                                        aaaaTCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACg                                                              >  1:315098/1‑140 (MQ=255)

                                                                        aaaaTCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACg                                                              <  1:348477/140‑1 (MQ=255)

                                                                            tCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCa                                                                <  2:1190711/134‑1 (MQ=255)

                                                                                aTACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCtt                                                      <  2:717801/140‑1 (MQ=255)

                                                                                aTACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCtt                                                      <  2:1164459/140‑1 (MQ=255)

                                                                                 tACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTc                                                     >  2:450161/1‑140 (MQ=255)

                                                                                  aCCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCa                                                    <  1:146842/140‑1 (MQ=255)

                                                                                  aCCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCa                                                    <  1:536630/140‑1 (MQ=255)

                                                                                  aCCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCa                                                    <  2:1094246/140‑1 (MQ=255)

                                                                                    cccTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCAct                                                  >  2:947468/1‑140 (MQ=255)

                                                                                     ccTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCActc                                                 <  1:944748/140‑1 (MQ=255)

                                                                                      cTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCa                                                                <  2:607550/124‑1 (MQ=255)

                                                                                      cTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCa                                                                >  1:607550/1‑124 (MQ=255)

                                                                                      cTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCActct                                                >  2:448968/1‑140 (MQ=255)

                                                                                      cTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCActct                                                >  1:512352/1‑140 (MQ=255)

                                                                                         aaTGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGa                                             >  2:1053669/1‑140 (MQ=255)

                                                                                             cTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAatat                                         >  2:644826/1‑140 (MQ=255)

                                                                                              tCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATc                                        >  2:871948/1‑140 (MQ=255)

                                                                                              tCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATc                                        >  1:966995/1‑140 (MQ=255)

                                                                                              tCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATc                                        <  1:947468/140‑1 (MQ=255)

                                                                                               ccATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCa                                       <  1:1181473/140‑1 (MQ=255)

                                                                                               ccATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCa                                       <  1:1627158/140‑1 (MQ=255)

                                                                                               ccATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCa                                       >  2:1181473/1‑140 (MQ=255)

                                                                                                cATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGa                                             <  1:482576/133‑1 (MQ=255)

                                                                                                 aTCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGt                                     <  2:1353555/140‑1 (MQ=255)

                                                                                                  tCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCa                                       <  1:32953/137‑1 (MQ=255)

                                                                                                  tCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCa                                       >  2:32953/1‑137 (MQ=255)

                                                                                                   cGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGTaa                                   <  2:1052414/140‑1 (MQ=255)

                                                                                                   cGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGTaa                                   >  2:472334/1‑140 (MQ=255)

                                                                                                     tCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGTAACt                                 >  2:793238/1‑140 (MQ=255)

                                                                                                     tCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGTAACt                                 >  2:1336223/1‑140 (MQ=255)

                                                                                                       cgcgCTTTCGTGGACGACCCTGACGCCGGGTAAGTCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATc                                        >  1:1516243/1‑131 (MQ=255)

                                                                                                       cgcgCTTTCGTGGACGACCCTGACGCCGGGTAAGTCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATc                                        <  2:1516243/131‑1 (MQ=255)

                                                                                                       cgcgCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTg                                              <  2:535117/125‑1 (MQ=255)

                                                                                                       cgcgCTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTg                                              >  1:535117/1‑125 (MQ=255)

                                                                                                         cgcTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGTAACTGgag                             <  2:673819/140‑1 (MQ=255)

                                                                                                         cgcTTTCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGTAACTGgag                             <  1:381498/140‑1 (MQ=255)

                                                                                                             ttCGTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGTAACTGGAGATGc                         <  1:472334/140‑1 (MQ=255)

                                                                                                                gTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGTAACTGGAGATGCTCa                      <  1:1053669/140‑1 (MQ=255)

                                                                                                                gTGGACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGTAACTGGAGATGCTCa                      <  1:726035/140‑1 (MQ=255)

                                                                                                                  ggACGACCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGTAACTGGAGATGCTCATg                    <  2:315098/140‑1 (MQ=255)

                                                                                                                   gacgacCCTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGTAACTGGAGATGc                         <  2:377395/134‑1 (MQ=255)

                                                                                                                        cccTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGTAACTGgaga                            <  2:52390/126‑1 (MQ=255)

                                                                                                                        cccTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGTAACTGGAGATGCTCATGAAATgg              >  2:624179/1‑140 (MQ=255)

                                                                                                                        cccTGACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGTAACTGGAGATGCTCATGAAATgg              >  2:163980/1‑140 (MQ=255)

                                                                                                                          ctcaCGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGTAACTGGAGATGCTCATGAAATGGTg            <  2:1286156/137‑1 (MQ=255)

                                                                                                                            gACGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGTAACTGGAGATGCTCATGAAATGGTGCa          <  1:1150818/140‑1 (MQ=255)

                                                                                                                              cGCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGTAACTGGAGATGCTCATGAAATGGTGCaaa        <  1:448968/140‑1 (MQ=255)

                                                                                                                               gCCGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGTAACTGGAGATGCTCATGAAATGGTGCAAAc       <  2:1040038/140‑1 (MQ=255)

                                                                                                                                ccGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGTAACTGGAGATGCTCATGAAATGGTGCAAACg      <  2:512352/140‑1 (MQ=255)

                                                                                                                                ccGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGTAACTGGAGATGCTCATGAAATGGTGCAAACg      <  2:1367277/140‑1 (MQ=255)

                                                                                                                                 cGGGTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGTAACTGGAGATGCTCATGAAATGGTGCAAACGt     <  1:1336223/140‑1 (MQ=255)

                                                                                                                                   ggTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGTAACTGGAGATGCTCATGAAATGGTGCAAACGTgg   <  1:1637874/140‑1 (MQ=255)

                                                                                                                                    gTAAGCCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGTAACTGGAGATGCTCATGAAATGGTGCAAACGTggg  >  2:344158/1‑140 (MQ=255)

CCAACCTGCTTGCACTTGAAAATACGGTGTCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGTAACTGGAGATGCTCATGAAATGGTGCAAACGTGGG  >  NC_000913/4548034‑4548305

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`