Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 888,876 A→G V315A (GTA→GCA)  ybjL ← putative transport protein YbjL

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913888,8760AG97.6% 275.6 / ‑2.3 82V315A (GTA→GCA) ybjLputative transport protein YbjL
Reads supporting (aligned to +/- strand):  ref base A (1/1);  new base G (39/41);  total (40/42)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.02e-01

ATCGCCGCTGACTTGTAAAACGTCACCTTTGTTAAGCACGACGTTGTCATCTATCGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTACAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGCTGGGATCGAGTCGGGCATGGGCGTCGGGATAGCCTACCAA  >  NC_000913/888740‑889006
                                                                                                                                        |                                                                                                                                  
aTCGCCGCTGACTTGTAAAACGTCTCCTTTGTTAAGCACGACGTTGTCATCTATCGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAg                                                                                                                                 >  2:959804/1‑140 (MQ=255)
     cgcTGACTTGTAAAACGTCACCTTTGTTAAGCACGACGTTGTCATCTATCGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTa                                                                                                                            >  2:896519/1‑140 (MQ=255)
        tGACTTGTAAAACGTCACCTTTGTTAAGCACGACGTTGTCATCTATCGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATgg                                                                                                                         <  2:1618275/140‑1 (MQ=255)
        tGACTTGTAAAACGTCACCTTTGTTAAGCACGACGTTGTCATCTATCGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTAACTGCAGCGTTATgg                                                                                                                         >  2:330828/1‑140 (MQ=255)
         gACTTGTAAAACGTCACCTTTGTTAAGCACGACGTTGTCATCTATCGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGt                                                                                                                        <  2:1372615/140‑1 (MQ=255)
                 aaaCGTCACCTTTGTTAAGCACGACGTTGTCATCTATCGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACg                                                                                                                <  2:293236/140‑1 (MQ=255)
                 aaaCGTCACCTTTGTTAAGCACGACGTTGTCATCTATCGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACg                                                                                                                >  2:1562591/1‑140 (MQ=255)
                   aCGTCTCCTTTGTTAAGCACGACGTTGTCATCTATCGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGAc                                                                                                              <  1:959804/140‑1 (MQ=255)
                   aCGTCACCTTTGTTAAGCACGACGTTGTCATCTATCGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGAc                                                                                                              <  2:71312/140‑1 (MQ=255)
                    cGTCACCTTTGTTAAGCACGACGTTGTCATCTATCGGCATCTCAATCTGGCTACGAATGGCGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTACAGCGTTATGGTTTTTAACGAc                                                                                                              >  2:1148326/1‑139 (MQ=255)
                    cGTCACCTTTGTTAAGCACGACGTTGTCATCTATCGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGAc                                                                                                              <  1:1433500/139‑1 (MQ=255)
                    cGTCACCTTTGTTAAGCACGACGTTGTCATCTATCGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGAc                                                                                                              >  2:1433500/1‑139 (MQ=255)
                    cGTCACCTTTGTTAAGCACGACGTTGTCATCTATCGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTACAGCGTTATGGTTTTTAACGAc                                                                                                              <  1:1148326/139‑1 (MQ=255)
                    cGTCACCTTTGTTAAGCACGACGTTGTCATCTATCGGCATCCCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGAcc                                                                                                             >  2:886247/1‑140 (MQ=255)
                      tCACCTTTGTTAAGCACGACGTTGTCATCTATCGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATgg                                                                                                                         <  2:1256172/126‑1 (MQ=255)
                      tCACCTTTGTTAAGCACGACGTTGTCATCTATCGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATgg                                                                                                                         >  1:1256172/1‑126 (MQ=255)
                        aCCTTTGTTAAGCACGACGTTGTCATCTATCGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCActt                                                                                                         >  1:1155444/1‑140 (MQ=255)
                        aCCTTTGTTAAGCACGACGTTGTCATCTATCGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCActt                                                                                                         <  1:1562591/140‑1 (MQ=255)
                              gTTAAGCACGACGTTGTCATCTATCGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAg                                                                                                   <  2:2552/140‑1 (MQ=255)
                               ttAAGCACGACGTTGTCATCTATCGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGt                                                                                                  <  2:674168/140‑1 (MQ=255)
                                  aGCACGACGTTGTCATCTATCGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGAc                                                                                               >  1:383755/1‑140 (MQ=255)
                                       gacgTTGTCATCTATCGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATAc                                                                                          >  2:887838/1‑140 (MQ=255)
                                        acgTTGTCATCTATCGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACg                                                                                         <  1:316480/140‑1 (MQ=255)
                                         cgTTGTCATCTATCGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGc                                                                                        <  1:283557/140‑1 (MQ=255)
                                         cgTTGTCATCTATCGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGc                                                                                        >  2:918866/1‑140 (MQ=255)
                                         cgTTGTCATCTATCGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGc                                                                                        >  2:34378/1‑140 (MQ=255)
                                                   tATCGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGaa                                                                              >  1:886175/1‑140 (MQ=255)
                                                      cGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGt                                                                           <  1:171257/140‑1 (MQ=255)
                                                        gCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCa                                                                         <  2:383755/140‑1 (MQ=255)
                                                          aTCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACg                                                                       >  2:1080404/1‑140 (MQ=255)
                                                           tctcAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGa                                                                      >  2:1394711/1‑140 (MQ=255)
                                                                aTCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGaa                                                                 <  2:1575360/140‑1 (MQ=255)
                                                                aTCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGaa                                                                 <  1:896519/140‑1 (MQ=255)
                                                                aTCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGaa                                                                 <  2:108311/140‑1 (MQ=255)
                                                                aTCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGaa                                                                 <  1:1413615/140‑1 (MQ=255)
                                                                   tGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCa                                                                         <  2:1466299/129‑1 (MQ=255)
                                                                   tGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCa                                                                         >  1:1466299/1‑129 (MQ=255)
                                                                     gCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAActt                                                            >  1:1530211/1‑140 (MQ=255)
                                                                      cTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGaa                                                                 <  2:1469616/134‑1 (MQ=255)
                                                                      cTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGaa                                                                 >  1:1469616/1‑134 (MQ=255)
                                                                         cGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCttt                                                        >  2:582634/1‑140 (MQ=255)
                                                                         cGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCttt                                                        <  1:887838/140‑1 (MQ=255)
                                                                           aaTGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTAACTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTAc                                                      <  1:330828/140‑1 (MQ=255)
                                                                               aCGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGtt                                                  >  2:601301/1‑140 (MQ=255)
                                                                                  cgGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACg                                               <  1:967607/140‑1 (MQ=255)
                                                                                  cgGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACg                                               <  1:582634/140‑1 (MQ=255)
                                                                                  cgGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACg                                               <  1:1455195/140‑1 (MQ=255)
                                                                                  cgGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACg                                               <  1:601301/140‑1 (MQ=255)
                                                                                  cgGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACg                                               <  1:1080404/140‑1 (MQ=255)
                                                                                  cgGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACg                                               <  1:1613170/140‑1 (MQ=255)
                                                                                             gCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGa                                             >  1:252811/1‑131 (MQ=255)
                                                                                             gCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGa                                             <  2:252811/131‑1 (MQ=255)
                                                                                              cAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGCTGGGATc                                   >  2:821165/1‑140 (MQ=255)
                                                                                              cAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGCTGGGATc                                   >  1:1171992/1‑140 (MQ=255)
                                                                                               aaCCGTGATCGGTCATCTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGCTGGGATCg                                  >  1:737378/1‑140 (MQ=255)
                                                                                               aaCCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGCTGGGa                                     >  1:261639/1‑137 (MQ=255)
                                                                                               aaCCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGCTGGGa                                     <  2:261639/137‑1 (MQ=255)
                                                                                               aaCCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGCTGGGATCg                                  >  1:112054/1‑140 (MQ=255)
                                                                                               aaCCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGCTGGGATCg                                  >  1:816352/1‑140 (MQ=255)
                                                                                               aaCCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGCTGGGATCg                                  >  1:1603169/1‑140 (MQ=255)
                                                                                                 ccGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACg                                               <  1:1065418/125‑1 (MQ=255)
                                                                                                 ccGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACg                                               >  2:1065418/1‑125 (MQ=255)
                                                                                                 ccGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGCTGGGATCGAg                                <  1:821165/140‑1 (MQ=255)
                                                                                                    tGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGc                                          <  2:1427470/127‑1 (MQ=255)
                                                                                                    tGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGc                                          >  1:1427470/1‑127 (MQ=255)
                                                                                                         ggTCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGCTGGGATCGAGTCGGGCAt                        >  1:1350917/1‑140 (MQ=255)
                                                                                                           tCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGCTGGGATCGAGTCGGGCATgg                      >  2:264287/1‑140 (MQ=255)
                                                                                                           tCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGCTGGGATCGAGTCGGGCATgg                      >  1:879237/1‑140 (MQ=255)
                                                                                                           tCAACTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGCTGGGATCGAGTCGGGCATgg                      >  1:937351/1‑140 (MQ=255)
                                                                                                              tcTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGCTGGGATCGAGTCGGGCATGGGCg                   <  2:737378/139‑1 (MQ=255)
                                                                                                               cTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGCTGGGATCGAGTCGGGCATGGGCGt                  >  2:243851/1‑140 (MQ=255)
                                                                                                               cTTCAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGCTGGGATCGAGTCGGGCATGGGCGt                  <  2:1530211/140‑1 (MQ=255)
                                                                                                                  cAGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTC‑‑TACCGTTACGGAAGCTGGGATCGAGTCGGGCATGGGCGTCGGGa             <  2:886175/140‑1 (MQ=255)
                                                                                                                   aGTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGCTGGGATCGAGTCGGGCATGGGCGTCggg              >  1:1053727/1‑140 (MQ=255)
                                                                                                                    gTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGCTGGGATCGAGTCGGGCATGGGCGTCGGGa             <  2:879237/140‑1 (MQ=255)
                                                                                                                    gTTGTGCGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGCTGGGATCGAGTCGGGCATGGGCGTCGGGa             <  2:937351/140‑1 (MQ=255)
                                                                                                                          cGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGCTGGGATCGAGTTGGGCATGGGCGTCGGGATAGCCt       >  1:284769/1‑140 (MQ=255)
                                                                                                                          cGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGCTGGGATCGAGTCGGGCa                         >  1:441936/1‑122 (MQ=255)
                                                                                                                          cGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGCTGGGATCGAGTCGGGCa                         <  2:441936/122‑1 (MQ=255)
                                                                                                                          cGAGACGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGCTGGGATCGAGTCGGGCATGGGCGTCGGGATAGCCt       >  2:1528949/1‑140 (MQ=255)
                                                                                                                             gaCGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGCTGGGATCGAGTCGGGCATGGGCGTCGGGATAGCCTAcc    <  2:1171992/140‑1 (MQ=255)
                                                                                                                               cGTTTACCTGCAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGCTGGGATCGAGTCGGGCATGGGCGTCGGGATAGCCTACCaa  <  2:678924/140‑1 (MQ=255)
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ATCGCCGCTGACTTGTAAAACGTCACCTTTGTTAAGCACGACGTTGTCATCTATCGGCATCTCAATCTGGCTACGAATGACGCGGTTAAGGAAGCAACCGTGATCGGTCAACTTCAGTTGTGCGAGACGTTTACCTACAGCGTTATGGTTTTTAACGACCACTTCTTCAGTGACGATACGCATGTCGAGAAGGTCACGATCGAAAACTTCTTTACCGTTACGGAAGCTGGGATCGAGTCGGGCATGGGCGTCGGGATAGCCTACCAA  >  NC_000913/888740‑889006

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: