BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	969,920	C→T	R178W (CGG→TGG)	ycaQ →	winged helix DNA‑binding domain‑containing protein YcaQ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	969,920	0	C	T	100.0%	386.8 / NA	109	R178W (CGG→TGG)	ycaQ	winged helix DNA‑binding domain‑containing protein YcaQ
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (53/56); total (53/56)

Only 100 of 110 total aligned reads displayed.

ATATTCATGATAAGGGGCCGGTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCTGGATAACAGTGCGCGTAGCCTGGGAATATTC  >  NC_000913/969783‑970054

atatTCATGATAAGGGGCCGGTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATgg                                                                                                                                      >  1:1479969/1‑140 (MQ=255)

atatTCATGATAAGGGGCCGGTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATgg                                                                                                                                      >  1:1016578/1‑140 (MQ=255)

atatTCATGATAAGGGGCCGGTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATgg                                                                                                                                      >  2:923414/1‑140 (MQ=255)

atatTCATGATAAGGGGCCGGTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATgg                                                                                                                                      >  1:1417687/1‑140 (MQ=255)

atatTCATGATAAGGGGCCGGTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATgg                                                                                                                                      >  2:1167208/1‑140 (MQ=255)

atatTCATGATAAGGGGCCGGTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATgg                                                                                                                                      >  2:485270/1‑140 (MQ=255)

         aTAAGGGGCCGGTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTc                                                                                                                             >  1:1432254/1‑140 (MQ=255)

         aTAAGGGGCCGGTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTc                                                                                                                             >  1:840347/1‑140 (MQ=255)

            aGGGGCCGGTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAg                                                                                                                          <  2:966388/140‑1 (MQ=255)

            aGGGGCCGGTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAg                                                                                                                          <  2:1456390/140‑1 (MQ=255)

             ggggCCGGTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAGCGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAgc                                                                                                                         >  1:575771/1‑140 (MQ=255)

             ggggCCGGTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAgc                                                                                                                         <  2:503020/140‑1 (MQ=255)

             ggggCCGGTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAgc                                                                                                                         >  2:326890/1‑140 (MQ=255)

             ggggCCGGTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAgc                                                                                                                         >  1:291185/1‑140 (MQ=255)

             ggggCCGGTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAgc                                                                                                                         >  2:874421/1‑140 (MQ=255)

             ggggCCGGTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAgc                                                                                                                         >  1:873044/1‑140 (MQ=255)

             ggggCCGGTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAgc                                                                                                                         >  2:171826/1‑140 (MQ=255)

             ggggCCGGTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAgc                                                                                                                         >  1:173249/1‑140 (MQ=255)

               ggCCGGTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAgcg                                                                                                                        >  2:288368/1‑139 (MQ=255)

               ggCCGGTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAgcg                                                                                                                        <  1:288368/139‑1 (MQ=255)

                gCCGGTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGcgcg                                                                                                                      >  1:161964/1‑140 (MQ=255)

                  cGGTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGtt                                                                                                                    <  1:1133919/140‑1 (MQ=255)

                   ggTACGTTCAGCCGATTTTGAGCATCCTCGCAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGttt                                                                                                                   <  2:1016578/140‑1 (MQ=255)

                    gTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTa                                                                                                                  <  1:171826/140‑1 (MQ=255)

                     tACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAgc                                                                                                                         >  2:1642153/1‑132 (MQ=255)

                     tACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAgc                                                                                                                         <  1:1642153/132‑1 (MQ=255)

                     tACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTAt                                                                                                                 >  1:112657/1‑140 (MQ=255)

                       cGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGa                                                                                                               >  1:1324726/1‑140 (MQ=255)

                         ttCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGAtt                                                                                                             >  2:1150520/1‑140 (MQ=255)

                            aGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTa                                                                                                                  <  2:903557/132‑1 (MQ=255)

                            aGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTa                                                                                                                  >  1:903557/1‑132 (MQ=255)

                             gCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAAc                                                                                                         <  1:485270/140‑1 (MQ=255)

                              ccGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAgcg                                                                                                                        <  1:1511877/124‑1 (MQ=255)

                              ccGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAgcg                                                                                                                        >  2:1511877/1‑124 (MQ=255)

                              ccGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAAcc                                                                                                        <  2:1014830/140‑1 (MQ=255)

                              ccGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAAcc                                                                                                        >  1:1014830/1‑140 (MQ=255)

                              ccGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAAcc                                                                                                        <  1:1442234/140‑1 (MQ=255)

                                gATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCa                                                                                                      <  1:1014152/140‑1 (MQ=255)

                                 aTTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCAc                                                                                                     <  2:840347/140‑1 (MQ=255)

                                           tCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAGTGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGc                                                                                           >  2:882410/1‑140 (MQ=255)

                                           tCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGc                                                                                           <  1:1070648/140‑1 (MQ=255)

                                           tCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGc                                                                                           <  2:112657/140‑1 (MQ=255)

                                            ccTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATg                                                                                            <  2:1374967/138‑1 (MQ=255)

                                            ccTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATg                                                                                            >  1:1374967/1‑138 (MQ=255)

                                            ccTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGGTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGcc                                                                                          >  1:382126/1‑140 (MQ=255)

                                              tCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTg                                                                                        >  2:370745/1‑140 (MQ=255)

                                               cGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGa                                                                                       <  1:1167208/140‑1 (MQ=255)

                                               cGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGa                                                                                       >  1:887954/1‑140 (MQ=255)

                                               cGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGa                                                                                       <  1:923414/140‑1 (MQ=255)

                                                 tAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACt                                                                                     <  1:370745/140‑1 (MQ=255)

                                                 tAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACt                                                                                     <  2:1479969/140‑1 (MQ=255)

                                                    aGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTggg                                                                                  <  1:942326/140‑1 (MQ=255)

                                                      gTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGc                                                                                           <  1:938212/129‑1 (MQ=255)

                                                      gTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGc                                                                                           >  2:938212/1‑129 (MQ=255)

                                                      gTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGa                                                                                       <  2:775628/133‑1 (MQ=255)

                                                      gTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGa                                                                                       <  2:1094301/133‑1 (MQ=255)

                                                      gTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGa                                                                                       >  1:1094301/1‑133 (MQ=255)

                                                      gTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGa                                                                                       >  1:775628/1‑133 (MQ=255)

                                                      gTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGgat                                                                                >  2:1641228/1‑140 (MQ=255)

                                                       tGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGgatg                                                                               >  1:1440373/1‑140 (MQ=255)

                                                        gCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCt                                                                                         >  2:1628968/1‑129 (MQ=255)

                                                        gCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCt                                                                                         <  1:1628968/129‑1 (MQ=255)

                                                        gCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGgatga                                                                              >  1:473082/1‑140 (MQ=255)

                                                         cAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGgatgat                                                                             <  2:291185/140‑1 (MQ=255)

                                                         cAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGgatgat                                                                             <  1:1641228/140‑1 (MQ=255)

                                                         cAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGgatgat                                                                             >  1:907276/1‑140 (MQ=255)

                                                          aaGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGatgatg                                                                            >  2:679663/1‑140 (MQ=255)

                                                              ggCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAgcg                                                                        <  2:887954/140‑1 (MQ=255)

                                                                              aGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCaa                                                        >  2:432065/1‑140 (MQ=255)

                                                                               gCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCaaa                                                       <  2:1300302/140‑1 (MQ=255)

                                                                                 cGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACa                                                     <  1:432065/140‑1 (MQ=255)

                                                                                  gCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAg                                                    <  1:979517/140‑1 (MQ=255)

                                                                                         cGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGa                                             <  2:161964/140‑1 (MQ=255)

                                                                                         cGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGa                                             <  2:1514397/140‑1 (MQ=255)

                                                                                              tCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAatca                                        <  2:173249/140‑1 (MQ=255)

                                                                                                   aaGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATg                                   <  2:388550/140‑1 (MQ=255)

                                                                                                   aaGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATg                                   <  2:575771/140‑1 (MQ=255)

                                                                                                   aaGGTTTATTTACTGCCGGAAAGGTGATCGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAGCCCACGGTGTAATGCGTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAGCAGAAGCAGAAATCATCATg                                   <  1:417012/140‑1 (MQ=255)

                                                                                                         tatttaCTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAAtcatca                                     >  1:1552518/1‑132 (MQ=255)

                                                                                                             taCTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCTGGATAACa                         <  1:770838/140‑1 (MQ=255)

                                                                                                              aCTGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCTGGATAACAg                        <  1:790090/140‑1 (MQ=255)

                                                                                                                tGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAAtcatca                                     <  2:1561920/125‑1 (MQ=255)

                                                                                                                tGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAAtcatca                                     >  1:1561920/1‑125 (MQ=255)

                                                                                                                tGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCt                                 >  2:90990/1‑129 (MQ=255)

                                                                                                                tGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCt                                 >  2:877403/1‑129 (MQ=255)

                                                                                                                tGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCt                                 <  1:877403/129‑1 (MQ=255)

                                                                                                                tGCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCTGGATAACAGTg                      >  2:1574266/1‑140 (MQ=255)

                                                                                                                 gCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATg                                   >  1:682813/1‑126 (MQ=255)

                                                                                                                 gCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATg                                   <  2:682813/126‑1 (MQ=255)

                                                                                                                 gCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCTGGATAACAGTgc                     >  1:423436/1‑140 (MQ=255)

                                                                                                                 gCCGGAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCTGGATAACAGTgc                     >  1:1492950/1‑140 (MQ=255)

                                                                                                                    ggAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCTGGATAACAGTGcgcg                  <  1:1150520/140‑1 (MQ=255)

                                                                                                                    ggAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCTGGATAACAGTGcgcg                  <  2:1324726/140‑1 (MQ=255)

                                                                                                                    ggAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGAATTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCTGGATAACAGTGcgcg                  <  2:1484163/140‑1 (MQ=255)

                                                                                                                     gAAAGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCTGGATAACAGTGCGCGt                 <  2:12202/140‑1 (MQ=255)

                                                                                                                       aaGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCTGGATAACAGTGCGCGTAg               <  1:326890/140‑1 (MQ=255)

                                                                                                                       aaGGTGATGGTGATTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCTGGATAACAGTGCGCGTAg               <  1:1035689/140‑1 (MQ=255)

                                                                                                                              tggtgatTGAGTGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCTGGATAACAGTGCGCGTAGCCTGGGa        <  1:882410/140‑1 (MQ=255)

                                                                                                                              tggtgatTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCTGGATAACAGTGCGCGTAGCCTGGGa        >  1:1356746/1‑140 (MQ=255)

                                                                                                                                gtgatTGAATGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCTGGATAACAGTGCGCGTAGCCTGGGAat      <  2:1356746/140‑1 (MQ=255)

ATATTCATGATAAGGGGCCGGTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCTGGATAACAGTGCGCGTAGCCTGGGAATATTC  >  NC_000913/969783‑970054

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`