BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,510,051	T→C	S17P (TCG→CCG)	ydcR →	fused putative DNA‑binding transcriptional regulator/putative aminotransferase YdcR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,510,051	0	T	C	100.0%	385.7 / NA	109	S17P (TCG→CCG)	ydcR	fused putative DNA‑binding transcriptional regulator/putative aminotransferase YdcR
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (61/48); total (61/48)

Only 100 of 110 total aligned reads displayed.

ATGGTTTAATTACAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGTCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGTCAGGGATATATTATCGCACGACCGCAGT  >  NC_000913/1509916‑1510186

aTGGTTTAATTACAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCggg                                                                                                                                     >  2:1613522/1‑140 (MQ=255)

  ggTTTAATTACAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTa                                                                                                                                   >  1:1552308/1‑140 (MQ=255)

  ggTTTAATTACAGTTAACGAAAAGTTGTCATTTTAAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTa                                                                                                                                   >  1:1580160/1‑140 (MQ=255)

       aaTTACAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTgg                                                                                                                              >  1:300091/1‑140 (MQ=255)

       aaTTACAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTgg                                                                                                                              >  1:1497612/1‑140 (MQ=255)

        aTTACAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATGATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGc                                                                                                                             >  2:1136040/1‑140 (MQ=255)

             aGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAAccc                                                                                                                        >  1:790805/1‑140 (MQ=255)

             aGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAAccc                                                                                                                        >  1:145441/1‑140 (MQ=255)

              gTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCg                                                                                                                       >  1:361288/1‑140 (MQ=255)

                 aaCGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCg                                                                                                                    >  1:1192628/1‑140 (MQ=255)

                  aCGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGa                                                                                                                   >  1:213754/1‑140 (MQ=255)

                         gTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTg                                                                                                            >  1:178058/1‑140 (MQ=255)

                         gTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTg                                                                                                            <  2:1552308/140‑1 (MQ=255)

                         gTTGTCATTTTAAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTg                                                                                                            <  2:1580160/140‑1 (MQ=255)

                              cATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTc                                                                                                       >  2:454936/1‑140 (MQ=255)

                              cATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTc                                                                                                       <  2:178058/140‑1 (MQ=255)

                                       caacTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGa                                                                                              <  1:1083279/140‑1 (MQ=255)

                                              tataGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTg                                                                                       <  2:1306929/140‑1 (MQ=255)

                                                taGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGgc                                                                                     <  1:1136040/140‑1 (MQ=255)

                                                   aCTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCt                                                                                  >  1:625981/1‑140 (MQ=255)

                                                   aCTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCt                                                                                  >  1:806856/1‑140 (MQ=255)

                                                    cTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGa                                                                                              >  1:1219454/1‑127 (MQ=255)

                                                    cTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGa                                                                                              <  2:1219454/127‑1 (MQ=255)

                                                     tGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCttt                                                                                >  2:931068/1‑140 (MQ=255)

                                                     tGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCttt                                                                                <  2:675800/140‑1 (MQ=255)

                                                     tGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCttt                                                                                >  1:776086/1‑140 (MQ=255)

                                                     tGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCttt                                                                                >  1:1365335/1‑140 (MQ=255)

                                                     tGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGAttt                                                                                >  2:1270315/1‑140 (MQ=255)

                                                       ccGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCa                                                                              >  2:1607194/1‑140 (MQ=255)

                                                       ccGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCa                                                                              >  1:164770/1‑140 (MQ=255)

                                                       ccGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCa                                                                              >  1:1215163/1‑140 (MQ=255)

                                                       ccGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCa                                                                              >  2:1654388/1‑140 (MQ=255)

                                                       ccGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCa                                                                              >  2:1455295/1‑140 (MQ=255)

                                                       ccGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCa                                                                              >  2:1408989/1‑140 (MQ=255)

                                                       ccGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCa                                                                              >  2:589120/1‑140 (MQ=255)

                                                       ccGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGGATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCa                                                                              >  2:1357404/1‑140 (MQ=255)

                                                        cGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAg                                                                             >  2:455894/1‑140 (MQ=255)

                                                           atcatcTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCa                                                                          <  1:1284790/140‑1 (MQ=255)

                                                           atcatcTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCa                                                                          <  2:1365335/140‑1 (MQ=255)

                                                           atcatcTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCa                                                                          <  1:1607194/140‑1 (MQ=255)

                                                             catcTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATg                                                                        <  2:1603988/140‑1 (MQ=255)

                                                             catcTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATg                                                                        <  2:776086/140‑1 (MQ=255)

                                                             catcTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATg                                                                        <  2:164770/140‑1 (MQ=255)

                                                             catcTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATg                                                                        <  1:993064/140‑1 (MQ=255)

                                                             catcTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATg                                                                        <  1:1455295/140‑1 (MQ=255)

                                                               tcTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAg                                                                      <  2:961681/140‑1 (MQ=255)

                                                               tcTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAg                                                                      >  2:878930/1‑140 (MQ=255)

                                                               tcTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAg                                                                      <  1:72840/140‑1 (MQ=255)

                                                                    acaTAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTa                                                                 <  2:1215163/140‑1 (MQ=255)

                                                                     caTAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTAt                                                                <  1:455894/140‑1 (MQ=255)

                                                                      aTAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGTCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATg                                                               >  2:805291/1‑140 (MQ=255)

                                                                      aTAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATg                                                               <  1:589120/140‑1 (MQ=255)

                                                                          ttACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATTTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTg                                                           >  1:238295/1‑140 (MQ=255)

                                                                             cGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCa                                                        >  1:453448/1‑140 (MQ=255)

                                                                                ttCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGcc                                                     >  2:468419/1‑140 (MQ=255)

                                                                                ttCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGcc                                                     <  1:1410553/140‑1 (MQ=255)

                                                                                ttCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGcc                                                     <  1:1357404/140‑1 (MQ=255)

                                                                                ttCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGcc                                                     <  2:1192628/140‑1 (MQ=255)

                                                                                ttCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGcc                                                     >  1:747428/1‑140 (MQ=255)

                                                                                 tCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCa                                                    <  1:1408989/140‑1 (MQ=255)

                                                                                 tCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCa                                                    <  2:145441/140‑1 (MQ=255)

                                                                                 tCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCa                                                    <  1:1600853/140‑1 (MQ=255)

                                                                                 tCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCa                                                    <  2:1266486/140‑1 (MQ=255)

                                                                                 tCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCa                                                    <  1:878930/140‑1 (MQ=255)

                                                                                  cGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCAt                                                   >  1:494345/1‑140 (MQ=255)

                                                                                  cGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCAt                                                   >  1:643525/1‑140 (MQ=255)

                                                                                  cGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCAt                                                   >  1:1161256/1‑140 (MQ=255)

                                                                                        tGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAg                                                       >  2:1526280/1‑130 (MQ=255)

                                                                                        tGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAg                                                       <  1:1526280/130‑1 (MQ=255)

                                                                                               aTACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGc                                      >  1:1428250/1‑140 (MQ=255)

                                                                                                 aCCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTc                                    <  2:955990/140‑1 (MQ=255)

                                                                                                   cagcagCTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGa                                  <  1:931068/140‑1 (MQ=255)

                                                                                                      cagcTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAg                               >  1:1497981/1‑140 (MQ=255)

                                                                                                       agcTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGt                              <  2:790805/140‑1 (MQ=255)

                                                                                                       agcTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGt                              <  2:1497612/140‑1 (MQ=255)

                                                                                                       agcTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGt                              <  2:25038/140‑1 (MQ=255)

                                                                                                       agcTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGt                              >  2:392726/1‑140 (MQ=255)

                                                                                                        gcTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGTc                             <  2:747428/140‑1 (MQ=255)

                                                                                                        gcTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGTc                             <  2:300091/140‑1 (MQ=255)

                                                                                                         cTTGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGTCa                            <  2:1075321/140‑1 (MQ=255)

                                                                                                          ttGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGTCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGTCAg                           <  1:805291/140‑1 (MQ=255)

                                                                                                          ttGCAGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGTCAg                           <  2:1428250/140‑1 (MQ=255)

                                                                                                              aGAACAATTACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGTCAGGGat                       <  2:806856/140‑1 (MQ=255)

                                                                                                                     ttACGCGAGCAGATTGCGCTGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGTCAGGGATAtattat                >  2:177880/1‑140 (MQ=255)

                                                                                                                     ttACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAATGTCAGGGATAtattat                >  2:1487732/1‑140 (MQ=255)

                                                                                                                     ttACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGt                              <  2:1058857/126‑1 (MQ=255)

                                                                                                                     ttACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGt                              >  1:1058857/1‑126 (MQ=255)

                                                                                                                     ttACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGTCAGGGATAtattat                >  2:973457/1‑140 (MQ=255)

                                                                                                                     ttACGCGAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGTCAGGGATAtattat                >  2:255613/1‑140 (MQ=255)

                                                                                                                         gcgAGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGTCAGGGATATATTATCGCa            <  1:454936/140‑1 (MQ=255)

                                                                                                                            aGCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGTCAGGGATATATTATCGCACGa         >  1:1129953/1‑140 (MQ=255)

                                                                                                                             gCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGTCAGGGATATATTATCGCACGAc        >  1:1226766/1‑140 (MQ=255)

                                                                                                                             gCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGTCAGGGATATATTATCGCACGAc        >  1:1610903/1‑140 (MQ=255)

                                                                                                                             gCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGTCAGGGATATATTATCGCACGAc        <  2:1226766/140‑1 (MQ=255)

                                                                                                                             gCAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCATATCAGTTGCTCGAAAGTCAGGGATATATTATCGCACGAc        >  1:890009/1‑140 (MQ=255)

                                                                                                                              cAGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGTCAGGGATATATTATCGCACGAcc       >  1:901716/1‑140 (MQ=255)

                                                                                                                               aGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGTCAGGGATATATTATCGCACGACCg      <  1:1487732/140‑1 (MQ=255)

                                                                                                                               aGATTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGTCAGGGATATATTATCGCACGACCg      <  1:255613/140‑1 (MQ=255)

                                                                                                                                 aTTGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGTCAGGGATATATTATCGCACGACCGCa    >  2:64734/1‑140 (MQ=255)

                                                                                                                                   tGCGCCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGTCAGGGATATATTATCGCACGACCGCAGt  <  2:1610903/140‑1 (MQ=255)

ATGGTTTAATTACAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGTCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGTCAGGGATATATTATCGCACGACCGCAGT  >  NC_000913/1509916‑1510186

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`