Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,568,811	A→G	S5P (TCC→CCC)	yddW ←	putative lipoprotein YddW

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,568,811	0	A	G	100.0%	344.9 / NA	97	S5P (TCC→CCC)	yddW	putative lipoprotein YddW
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (52/45);  total (52/45)

GCGTCGTGGCTGGTGGCTTTGAACCTGCTGGTGGTGTCACCATGGACTCTGGAGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTATCGCTCCCTTGTCTTATAACCATTCA  >  NC_000913/1568676‑1568946                                                                                                                                        |                                                                                                                                        gCGTCGTGGCTGGTGGCTTTGAACCTGCTGGTGGTGTCACCATGGACTCTGGAGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAg                                                                                                                                     <  1:230475/140‑1 (MQ=255) gCGTCGTGGCTGGTGGCTTTGAACCTGCTGGTGGTGTCACCATGGACTCTGGAGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAg                                                                                                                                     <  2:187385/140‑1 (MQ=255) gCGTCGTGGCTGGTGGCTTTGAACCTGCTGGTGGTGTCACCATGGACTCTGGAGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAg                                                                                                                                     <  1:670746/140‑1 (MQ=255) gCGTCGTGGCTGGTGGCTTTGAACCTGCTGGTGGTGTCACCATGGACTCTGGAGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAg                                                                                                                                     <  2:1277724/140‑1 (MQ=255)    tcgtGGCTGGTGGCTTTGAACCTGCTGGTGGTGTCACCATGGACTCTGGAGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAg                                                                                                                                     >  1:180439/1‑137 (MQ=255)    tcgtGGCTGGTGGCTTTGAACCTGCTGGTGGTGTCACCATGGACTCTGGAGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAg                                                                                                                                     <  2:180439/137‑1 (MQ=255)         gCTGGTGGCTTTGAACCTGCTGGTGGTGTCACCATGGACTCTGGAGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCat                                                                                                                             >  1:1581907/1‑140 (MQ=255)                 cTTTGAACCTGCTGGTGGTGTCACCATGGACTCTGGAGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTg                                                                                                                     >  1:462863/1‑140 (MQ=255)                   ttGAACCTGCTGGTGGTGTCACCATGGACTCTGGAGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGt                                                                                                                   <  2:1659723/140‑1 (MQ=255)                   ttGAACCTGCTGGTGGTGTCACCATGGACTCTGGAGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGt                                                                                                                   >  1:849839/1‑140 (MQ=255)                   ttGAACCTGCTGGTGGTGTCACCATGGACTCTGGAGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGt                                                                                                                   <  2:1636175/140‑1 (MQ=255)                     gAACCTGCTGGTGGTGTCACCATGGACTCTGGAGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGttt                                                                                                                 <  2:462863/140‑1 (MQ=255)                                  gtgtCACCATGGACTCTGGAGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGAt                                                                                                    >  2:1434272/1‑140 (MQ=255)                                   tgtCACCATGGACTCTGGAGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGAtg                                                                                                   <  2:979637/140‑1 (MQ=255)                                       aCCATGGACTCTGGAGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTgcg                                                                                               >  2:171719/1‑140 (MQ=255)                                          aTGGACTCTGGAGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTc                                                                                            >  2:163556/1‑140 (MQ=255)                                             gACTCTGGAGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCAtt                                                                                         >  2:361849/1‑140 (MQ=255)                                               ctctGGAGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATtct                                                                                       <  2:1476888/140‑1 (MQ=255)                                               ctctGGAGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATtct                                                                                       <  1:1434272/140‑1 (MQ=255)                                               ctctGGAGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATtct                                                                                       <  2:369253/140‑1 (MQ=255)                                                tctGGAGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGACGTGCGCTCATtctc                                                                                      >  1:954221/1‑140 (MQ=255)                                                  tGGAGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGt                                                                                    >  1:209632/1‑140 (MQ=255)                                                  tGGAGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGt                                                                                    <  1:940364/140‑1 (MQ=255)                                                       gCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTa                                                                               >  1:1379033/1‑140 (MQ=255)                                                         gTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATc                                                                             <  2:313392/140‑1 (MQ=255)                                                         gTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATc                                                                             <  1:227547/140‑1 (MQ=255)                                                         gTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATc                                                                             >  1:90437/1‑140 (MQ=255)                                                         gTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATc                                                                             <  2:90437/140‑1 (MQ=255)                                                         gTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATc                                                                             >  1:313392/1‑140 (MQ=255)                                                          tGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATGTGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATcc                                                                            >  2:1557690/1‑140 (MQ=255)                                                          tGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATcc                                                                            >  2:1656129/1‑140 (MQ=255)                                                             ttttACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCg                                                                         <  2:1379033/140‑1 (MQ=255)                                                              tttACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATGTGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGt                                                                        <  1:1557690/140‑1 (MQ=255)                                                              tttACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGt                                                                        <  1:1007128/140‑1 (MQ=255)                                                                       acacAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAAt                                                               >  2:1498305/1‑140 (MQ=255)                                                                       acacAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAAt                                                               <  2:209632/140‑1 (MQ=255)                                                                       acacAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAAt                                                               >  1:1471798/1‑140 (MQ=255)                                                                        cacaGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATa                                                              <  1:1656129/140‑1 (MQ=255)                                                                         acaGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATc                                                                             <  2:70441/124‑1 (MQ=255)                                                                         acaGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATc                                                                             >  1:70441/1‑124 (MQ=255)                                                                             tAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCaa                                                                >  2:1521820/1‑133 (MQ=255)                                                                             tAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCaa                                                                <  1:1521820/133‑1 (MQ=255)                                                                             tAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACa                                                         >  2:235917/1‑140 (MQ=255)                                                                               aaaGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACagc                                                       <  2:849839/140‑1 (MQ=255)                                                                                 aGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACagcaa                                                     <  1:1155988/140‑1 (MQ=255)                                                                                  gTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGCAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACagcaag                                                    >  2:616727/1‑140 (MQ=255)                                                                                   tGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACagcaagc                                                   <  2:577718/140‑1 (MQ=255)                                                                                     ccAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCAc                                                 >  1:255838/1‑140 (MQ=255)                                                                                       aGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCaa                                                                <  1:740506/123‑1 (MQ=255)                                                                                       aGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCaa                                                                >  2:740506/1‑123 (MQ=255)                                                                                       aGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGa                                               >  2:1247613/1‑140 (MQ=255)                                                                                       aGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGa                                               >  1:1619393/1‑140 (MQ=255)                                                                                       aGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGa                                               >  2:1374613/1‑140 (MQ=255)                                                                                       aGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGa                                               >  2:193375/1‑140 (MQ=255)                                                                                         tGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGaaa                                             >  2:1040461/1‑140 (MQ=255)                                                                                                aGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAg                                      <  1:107395/140‑1 (MQ=255)                                                                                                   aTCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGa                                   >  2:244667/1‑140 (MQ=255)                                                                                                    tCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGAt                                  >  1:822723/1‑140 (MQ=255)                                                                                                     cGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATg                                 <  2:340300/140‑1 (MQ=255)                                                                                                     cGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATg                                 <  1:163556/140‑1 (MQ=255)                                                                                                       cTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAg                                                                                                                                     >  2:697856/1‑38 (MQ=255)                                                                                                       cTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAg                                                                                                                                     <  1:697856/38‑1 (MQ=255)                                                                                                       cTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAg                                          >  1:854276/1‑129 (MQ=255)                                                                                                       cTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAg                                          <  2:854276/129‑1 (MQ=255)                                                                                                       cTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGaa                               >  2:1553996/1‑140 (MQ=255)                                                                                                       cTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGaa                               >  1:1436399/1‑140 (MQ=255)                                                                                                       cTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGaa                               >  1:771680/1‑140 (MQ=255)                                                                                                         ggTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCGTATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAAtt                             >  2:160163/1‑140 (MQ=255)                                                                                                          gTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTa                            >  2:1625463/1‑140 (MQ=255)                                                                                                          gTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTa                            >  1:1326376/1‑140 (MQ=255)                                                                                                          gTCTTCTAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTa                            <  1:361849/140‑1 (MQ=255)                                                                                                            cttctAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTATc                          <  2:1439563/140‑1 (MQ=255)                                                                                                             ttctAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTATCg                         <  1:1498305/140‑1 (MQ=255)                                                                                                             ttctAATCGTTAATTTCTTGTTTCGGGGGAAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTATCg                         <  1:1625463/140‑1 (MQ=255)                                                                                                               ctAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTATCGCt                       >  1:80704/1‑140 (MQ=255)                                                                                                                tAATCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTATCGCTc                      >  1:1493621/1‑140 (MQ=255)                                                                                                                  aTCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTATCGCTccc                    >  1:629776/1‑140 (MQ=255)                                                                                                                   tCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTATCGCTCCCt                   <  2:629776/140‑1 (MQ=255)                                                                                                                   tCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTATCGCTCCCt                   <  2:957247/140‑1 (MQ=255)                                                                                                                   tCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTATCGCTCCCt                   <  2:1493621/140‑1 (MQ=255)                                                                                                                   tCGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTATCGCTCCCt                   <  1:244667/140‑1 (MQ=255)                                                                                                                    cGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGGGCGATGAATTATCGCTCCCtt                  >  1:1616689/1‑140 (MQ=255)                                                                                                                    cGTTAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTATCGCTCCCtt                  >  1:233462/1‑140 (MQ=255)                                                                                                                       tAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTATCGCTCCCTTGTc               >  1:1636830/1‑140 (MQ=255)                                                                                                                       tAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTATCGCTCCCTTGTc               >  1:1149763/1‑140 (MQ=255)                                                                                                                       tAATTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTATCGCTCCCTTGTc               >  2:317171/1‑140 (MQ=255)                                                                                                                         aTTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTATCGCTCCCt                   <  2:1221173/134‑1 (MQ=255)                                                                                                                         aTTTCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTATCGCTCCCt                   >  1:1221173/1‑134 (MQ=255)                                                                                                                            tCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTATCGCTCCCt                   <  2:1281651/131‑1 (MQ=255)                                                                                                                            tCTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTATCGCTCCCt                   >  1:1281651/1‑131 (MQ=255)                                                                                                                             cTTGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTATCGCTCCCTTGTCTTATaa         <  1:193375/140‑1 (MQ=255)                                                                                                                              ttGTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTATCGCTCCCTTGTCTTATAAc        >  1:142568/1‑140 (MQ=255)                                                                                                                                gTTTCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTATCGCTCCCTTGTCTTATAACCa      >  1:427270/1‑140 (MQ=255)                                                                                                                                  ttCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTATCGCTCCCTTGTCTTATAACCAtt    <  1:1609505/140‑1 (MQ=255)                                                                                                                                   tCGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTATCGCTCCCTTGTCTTATAACCATTc   >  2:458287/1‑140 (MQ=255)                                                                                                                                    cGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTGTCGCTCCCTTGTCTTATAACCATTCa  <  1:235917/140‑1 (MQ=255)                                                                                                                                    cGGGGGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTGCTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTATCGCTCCCTTGTCTTATAACCATTCa  >  2:61277/1‑140 (MQ=255)                                                                                                                                        |                                                                                                                                        GCGTCGTGGCTGGTGGCTTTGAACCTGCTGGTGGTGTCACCATGGACTCTGGAGGCGTGCTTTTACAACTACACAGTAAAAGTGCCAGTGCAACTAGTATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATTATCGCTCCCTTGTCTTATAACCATTCA  >  NC_000913/1568676‑1568946

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑