BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,596,660	A→G	G26G (GGT→GGC)	ypfJ ←	uncharacterized protein YpfJ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,596,660	0	A	G	100.0%	448.0 / NA	125	G26G (GGT→GGC)	ypfJ	uncharacterized protein YpfJ
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (55/70); total (55/70)

Only 100 of 127 total aligned reads displayed.

ATTGACCGCGTTGATTGTTGTTGGGAAACCGGCTGCCCGGTCATCAACCCGGTTAAATCAACACCATAGTAGCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGACCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGAT  >  NC_000913/2596523‑2596794

aTTGACCGCGTTGATTGTTGTTGGGAAACCGGCTGCCCGGTCATCAACCCGGTTAAATCAACACCATAGTAGCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGcc                                                                                                                                      >  1:914536/1‑140 (MQ=255)

   gACCGCGTTGATTGTTGTTGGGAAACCGGCTGCCCGGTCATCAACCCGGTTAAATCAACACCATAGTAGCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGgccgcc                                                                                                                                   <  2:359541/140‑1 (MQ=255)

      cgcgTTGATTGTTGTTGGGAAACCGGCTGCCCGGTCATCAACCCGGTTAAATCAACACCATAGTAGCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCAt                                                                                                                                >  1:809358/1‑140 (MQ=255)

       gcgTTGATTGTTGTTGGGAAACCGGCTGCCCGGTCATCAACCCGGTTAAATCAACACCATAGTAGCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATa                                                                                                                               <  1:565943/140‑1 (MQ=255)

          ttGATTGTTGTTGGGAAACCGGCTGCCCGGTCATCAACCCGGTTAAATCAACACCATAGTAGCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGAt                                                                                                                            >  2:1318856/1‑140 (MQ=255)

           tGATTGTTGTTGGGAAACCGGCTGCCCGGTCATCAACCCGGTTAAATCAACACCATAGTAGCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATg                                                                                                                           <  1:651585/140‑1 (MQ=255)

             aTTGTTGTTGGGAAACCGGCTGCCCGGTCATCAACCCGGTTAAATCAACACCATAGTAGCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGa                                                                                                                         <  1:541613/140‑1 (MQ=255)

                   gttgGGAAACCGGCTGCCCGGTAATCAACCCGGTTAAATCAACACCATAGTAGCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGAccacca                                                                                                                   >  2:395705/1‑140 (MQ=255)

                    ttgGGAAACCGGCTGCCCGGTCATCAACCCGGTTAAATCAACACCATAGTAGCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCag                                                                                                                  <  2:468896/140‑1 (MQ=255)

                     tgGGAAACCGGCTGCCCGGTCATCAACCCGGTTAAATCAACACCATAGTAGCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCaga                                                                                                                 <  1:1053695/140‑1 (MQ=255)

                      gggAAACCGGCTGCCCGGTCATCAACCCGGTTAAATCAACACCATAGTAGCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCagag                                                                                                                >  2:662002/1‑140 (MQ=255)

                       ggAAACCGGCTGCCCGGTCATCAACCCGGTTAAATCAACACCATAGTAGCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGc                                                                                                               >  1:1276253/1‑140 (MQ=255)

                          aaCCGGCTGCCCGGTCATCAACCCGGTTAAATCAACACCATAGTAGCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGt                                                                                                            <  2:787971/140‑1 (MQ=255)

                           aCCGGCTGCCCGGTCATCAACCCGGTTAAATCAACACCATAGTAGCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGtt                                                                                                           >  2:861635/1‑140 (MQ=255)

                           aCCGGCTGCCCGGTCATCAACCCGGTTAAATCAACACCATAGTAGCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGtt                                                                                                           >  1:159075/1‑140 (MQ=255)

                               gCTGCCCGGTCATCAACCCGGTTAAATCAACACCATAGTAGCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTgcgc                                                                                                       <  1:1318856/140‑1 (MQ=255)

                                 tGCCCGGTCATCAACCCGGTTAAATCAACACCATAGTAGCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCt                                                                                                     <  2:914536/140‑1 (MQ=255)

                                             aaCCCGGTTAAATCAACACCATAGTAGCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACAtt                                                                                         >  1:368178/1‑140 (MQ=255)

                                                    ttAAATCAACACCATAGTAGCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACtt                                                                                  >  2:15995/1‑140 (MQ=255)

                                                         tCAACACCATAGTAGCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACg                                                                             <  1:1626616/140‑1 (MQ=255)

                                                         tCAACACCATAGTAGCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACg                                                                             <  2:1205769/140‑1 (MQ=255)

                                                             cacCATAGTAGCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGc                                                                         >  2:152737/1‑140 (MQ=255)

                                                              acCATAGTAGCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGcc                                                                        <  1:1538611/140‑1 (MQ=255)

                                                                cATAGTAGCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTGACTTTCACGTCGCCCt                                                                      >  2:1487740/1‑140 (MQ=255)

                                                                  tagtagCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTg                                                                    >  2:74472/1‑140 (MQ=255)

                                                                  tagtagCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCATTg                                                                    <  2:843800/140‑1 (MQ=255)

                                                                   agtagCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGc                                                                   >  2:680821/1‑140 (MQ=255)

                                                                    gtagCGTGCAACCAGCACGAATAGCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCGCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGcc                                                                  <  2:1002215/140‑1 (MQ=255)

                                                                    gtagCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGcc                                                                  <  2:1370657/140‑1 (MQ=255)

                                                                    gtagCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGcc                                                                  <  2:740514/140‑1 (MQ=255)

                                                                    gtagCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGcc                                                                  <  2:26556/140‑1 (MQ=255)

                                                                    gtagCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGcc                                                                  <  1:199099/140‑1 (MQ=255)

                                                                    gtagCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGcc                                                                  <  2:400901/140‑1 (MQ=255)

                                                                       gCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAAc                                                               >  2:620530/1‑140 (MQ=255)

                                                                       gCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAAc                                                               <  2:46200/140‑1 (MQ=255)

                                                                        ccTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGcc                                                                  <  1:124414/136‑1 (MQ=255)

                                                                        ccTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGcc                                                                  >  2:124414/1‑136 (MQ=255)

                                                                         cTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGc                                                             >  1:1161229/1‑140 (MQ=255)

                                                                         cTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGc                                                             <  1:680821/140‑1 (MQ=255)

                                                                          tGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGcc                                                                  <  2:1319526/134‑1 (MQ=255)

                                                                          tGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCa                                                            >  2:1109583/1‑140 (MQ=255)

                                                                          tGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCa                                                            >  1:14179/1‑140 (MQ=255)

                                                                          tGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCCCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCa                                                            >  1:656955/1‑140 (MQ=255)

                                                                            cAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGcc                                                                  <  2:1190807/132‑1 (MQ=255)

                                                                            cAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGcc                                                                  <  2:52165/132‑1 (MQ=255)

                                                                            cAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGcc                                                                  >  2:859318/1‑132 (MQ=255)

                                                                            cAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGcc                                                                  <  1:859318/132‑1 (MQ=255)

                                                                            cAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGcc                                                                  >  1:52165/1‑132 (MQ=255)

                                                                            cAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGcc                                                                  >  1:1190807/1‑132 (MQ=255)

                                                                            cAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAAc                                                               <  2:1223041/135‑1 (MQ=255)

                                                                            cAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATa                                                          <  1:200660/140‑1 (MQ=255)

                                                                            cAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATa                                                          >  2:475155/1‑140 (MQ=255)

                                                                            cAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATa                                                          <  1:1109583/140‑1 (MQ=255)

                                                                            cAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATa                                                          >  1:1356547/1‑140 (MQ=255)

                                                                            cAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATa                                                          <  1:1244844/140‑1 (MQ=255)

                                                                            cAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATa                                                          >  1:1342295/1‑140 (MQ=255)

                                                                              aCCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGa                                                        <  1:592403/140‑1 (MQ=255)

                                                                                 aGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATAc                                                     <  1:74472/140‑1 (MQ=255)

                                                                                 aGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATAc                                                     <  1:452001/140‑1 (MQ=255)

                                                                                 aGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATAc                                                     <  2:1161229/140‑1 (MQ=255)

                                                                                 aGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATAc                                                     >  1:1125702/1‑140 (MQ=255)

                                                                                   cACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCa                                                            >  1:946601/1‑131 (MQ=255)

                                                                                   cACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCa                                                            <  2:946601/131‑1 (MQ=255)

                                                                                   cACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCt                                                   >  1:236573/1‑140 (MQ=255)

                                                                                     cGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTca                                                 <  1:861635/140‑1 (MQ=255)

                                                                                      gACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTcaa                                                <  1:827038/140‑1 (MQ=255)

                                                                                      gACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTcaa                                                <  2:159075/140‑1 (MQ=255)

                                                                                          aTCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAat                                            <  1:813967/140‑1 (MQ=255)

                                                                                               tAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATAtt                                       <  1:620530/140‑1 (MQ=255)

                                                                                               tAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATAtt                                       <  1:549849/140‑1 (MQ=255)

                                                                                               tAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATAtt                                       <  1:475155/140‑1 (MQ=255)

                                                                                               tAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATAtt                                       <  1:1550724/140‑1 (MQ=255)

                                                                                                  aaTCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTca                                                 >  1:717689/1‑127 (MQ=255)

                                                                                                  aaTCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTca                                                 <  2:717689/127‑1 (MQ=255)

                                                                                                  aaTCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATATTCAt                                    >  2:299997/1‑140 (MQ=255)

                                                                                                   aTCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATATTCAtt                                   >  2:409047/1‑140 (MQ=255)

                                                                                                      aGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATATTCATtata                                >  2:44796/1‑140 (MQ=255)

                                                                                                       gCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATATTCATTATAg                               >  1:1194756/1‑140 (MQ=255)

                                                                                                         ccGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGGTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATATTCATTATAGaa                             <  2:179843/140‑1 (MQ=255)

                                                                                                         ccGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAat                                            >  1:1003510/1‑125 (MQ=255)

                                                                                                         ccGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATATTCATTATAGaa                             <  1:1196112/140‑1 (MQ=255)

                                                                                                         ccGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATATTCATTATAGaa                             <  2:1155991/140‑1 (MQ=255)

                                                                                                         ccGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTATCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATATTCATTATAGaa                             <  1:459575/140‑1 (MQ=255)

                                                                                                          cGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCATCAATATAGTCATTATAGaaa                            <  2:1356547/140‑1 (MQ=255)

                                                                                                          cGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATATTCATTATAGaaa                            <  1:299997/140‑1 (MQ=255)

                                                                                                          cGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATATTCATTATAGaaa                            <  1:148438/140‑1 (MQ=255)

                                                                                                          cGCCTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATATTCATTATAGaaa                            <  1:898862/140‑1 (MQ=255)

                                                                                                            ccTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATATTCATTATAGAAATg                          <  1:1355009/140‑1 (MQ=255)

                                                                                                             cTTTACCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATATTCATTATAGaa                             <  2:819640/136‑1 (MQ=255)

                                                                                                                 aCCGCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATATTCATTATAGAAATGATCGt                     <  1:431196/140‑1 (MQ=255)

                                                                                                                    gCTTGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATATTCATTATAGAAATGATCGTAgg                  <  1:662002/140‑1 (MQ=255)

                                                                                                                       tGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATATTCATTATAGAAATGATCGTAggtgg               >  2:1502523/1‑140 (MQ=255)

                                                                                                                       tGGCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATATTCATTATAGAAATGATCGTAggtgg               >  1:1459818/1‑140 (MQ=255)

                                                                                                                         gCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATATTCATTATAGAAATGATCGTAGGTGGtt             <  2:151872/140‑1 (MQ=255)

                                                                                                                         gCAGGCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATATTCATTATAGAAATGATCGTAGGTGGtt             <  2:893965/140‑1 (MQ=255)

                                                                                                                             gCGAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCaga         >  2:1568550/1‑140 (MQ=255)

                                                                                                                               gAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAgg       <  1:1568550/140‑1 (MQ=255)

                                                                                                                               gAAAACCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAgg       <  1:1502523/140‑1 (MQ=255)

                                                                                                                                  aaCCGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAg    <  1:395705/140‑1 (MQ=255)

                                                                                                                                    ccGGGGCCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGAt  <  1:44796/140‑1 (MQ=255)

ATTGACCGCGTTGATTGTTGTTGGGAAACCGGCTGCCCGGTCATCAACCCGGTTAAATCAACACCATAGTAGCCTGCAACCAGCACGACTATCAGTAAAATCAGCCCGCCTTTACCGCTTGGCAGGCGAAAACCGGGACCGCCCATAGATGGACCACCAGAGCTGTTGCGCCTGTCTTCAACATTGTCACTTTCACGTCGCCCTTGCCAACGCATAGATACCTCAACAATATATTCATTATAGAAATGATCGTAGGTGGTTCAGAGGAAGAT  >  NC_000913/2596523‑2596794

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`