BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,773,481	A→G	E55G (GAA→GGA)	yfjW →	CP4‑57 prophage; uncharacterized protein YfjW

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,773,481	0	A	G	100.0%	363.9 / NA	102	E55G (GAA→GGA)	yfjW	CP4‑57 prophage; uncharacterized protein YfjW
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (47/55); total (47/55)

Only 100 of 102 total aligned reads displayed.

GTAAGAAAGATATTTAGCAAAAAAATTGACTTTACGATCTTGGCATTTTTCTATATTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGAATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTTATACAGCATAGAATTAAAGCTTATTTAACATTAT  >  NC_000913/2773345‑2773615

gTAAGAAAGATATTTAGCAAAAAAATTGACTTTACGATCTTGGCATTTTTCTATATTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATg                                                                                                                                     <  1:273277/140‑1 (MQ=255)

gTAAGAAAGATATTTAGCAAAAAAATTGACTTTACGATCTTGGCATTTTTCTATATTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATg                                                                                                                                     <  2:792493/140‑1 (MQ=255)

   agaaagaTATTTAGCAAAAAAATTGACTTTACGATCTTGGCATTTTTCTATATTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTc                                                                                                                                  >  1:205349/1‑140 (MQ=255)

     aaagaTATTTAGCAAAAAAATTGACTTTACGATCTTGGCATTTTTCTATATTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCaa                                                                                                                                <  2:862024/140‑1 (MQ=255)

     aaagaTATTTAGCAAAAAAATTGACTTTACGATCTTGGCATTTTTCTATATTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCaa                                                                                                                                >  1:133241/1‑140 (MQ=255)

               aGCAAAAAAATTGACTTTACGATCTTGGCATTTTTCTATATTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGa                                                                                                                      >  2:617830/1‑140 (MQ=255)

               aGCAAAAAAATTGACTTTACGATCTTGGCATTTTTCTATATTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGa                                                                                                                      <  2:1525073/140‑1 (MQ=255)

               aGCAAAAAAATTGACTTTACGATCTTGGCATTTTTCTATATTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGa                                                                                                                      <  1:907798/140‑1 (MQ=255)

               aGCAAAAAAATTGACTTTACGATCTTGGCATTTTTCTATATTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGa                                                                                                                      <  1:1177876/140‑1 (MQ=255)

               aGCAAAAAAATTGACTTTACGATCTTGGCATTTTTCTATATTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGATAATTGTTATGGATGCTCAATGAAACTTGa                                                                                                                      >  1:1081677/1‑140 (MQ=255)

                   aaaaaaTTGACTTTACGATCTTGGCATTTTTCTATATTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTAc                                                                                                                  >  2:40240/1‑140 (MQ=255)

                            aCTTTACGATCTTGGCATTTTTCTATATTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACaa                                                                                                         <  1:40240/140‑1 (MQ=255)

                                tACGATCTTGGCATTTTTCTATATTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAatttt                                                                                                     >  2:545578/1‑140 (MQ=255)

                                   gATCTTGGCATTTTTCTATATTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAattttatt                                                                                                  <  1:869136/140‑1 (MQ=255)

                                        tGGCATTTTTCTATATTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCa                                                                                             <  1:410491/140‑1 (MQ=255)

                                             tttttCTATATTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGa                                                                                        <  2:160518/140‑1 (MQ=255)

                                               tttCTATATTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTTCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGaaa                                                                                      >  1:740983/1‑140 (MQ=255)

                                                ttCTATATTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAAc                                                                                     >  2:1227905/1‑140 (MQ=255)

                                                  cTATATTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCg                                                                                   <  2:132703/140‑1 (MQ=255)

                                                   tataTTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATA‑‑TTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCAt                                                                                <  1:1558863/140‑1 (MQ=255)

                                                    atatTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCa                                                                                 <  1:545578/140‑1 (MQ=255)

                                                    atatTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCa                                                                                 <  2:649345/140‑1 (MQ=255)

                                                    atatTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCa                                                                                 <  2:1235770/140‑1 (MQ=255)

                                                    atatTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCa                                                                                 <  1:383346/140‑1 (MQ=255)

                                                       tttCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATgg                                                                              <  2:509787/140‑1 (MQ=255)

                                                        ttCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCa                                                                                 <  2:1641446/136‑1 (MQ=255)

                                                        ttCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCa                                                                                 >  1:1641446/1‑136 (MQ=255)

                                                        ttCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGt                                                                             <  2:133241/140‑1 (MQ=255)

                                                          ccTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTAc                                                                           <  1:329691/140‑1 (MQ=255)

                                                          ccTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTAc                                                                           >  2:390570/1‑140 (MQ=255)

                                                          ccTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTAc                                                                           >  2:423593/1‑140 (MQ=255)

                                                          ccTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTAc                                                                           >  2:184212/1‑140 (MQ=255)

                                                          ccTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTAc                                                                           >  1:410048/1‑140 (MQ=255)

                                                          ccTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTAc                                                                           >  2:86794/1‑140 (MQ=255)

                                                          ccTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTAc                                                                           >  1:1659879/1‑140 (MQ=255)

                                                          ccTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTAc                                                                           <  1:743238/140‑1 (MQ=255)

                                                          ccTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATAGTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCATTGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTAc                                                                           >  1:189726/1‑140 (MQ=255)

                                                            tctATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCt                                                                         <  1:423593/140‑1 (MQ=255)

                                                               aTTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCa                                                                                 <  2:1187509/129‑1 (MQ=255)

                                                               aTTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCa                                                                                 >  1:1187509/1‑129 (MQ=255)

                                                               aTTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATgg                                                                              <  1:404301/132‑1 (MQ=255)

                                                               aTTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATgg                                                                              >  2:404301/1‑132 (MQ=255)

                                                               aTTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCat                                                                      >  2:450024/1‑140 (MQ=255)

                                                                    ttttCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATctg                                                                 <  2:89555/140‑1 (MQ=255)

                                                                     tttCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATctgc                                                                <  2:141523/140‑1 (MQ=255)

                                                                      ttcttcTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATctgct                                                               >  1:590668/1‑140 (MQ=255)

                                                                       tcttctTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATctgctg                                                              <  1:849722/140‑1 (MQ=255)

                                                                       tcttctTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATctgctg                                                              <  2:162405/140‑1 (MQ=255)

                                                                         ttcttTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGtt                                                            <  2:249450/140‑1 (MQ=255)

                                                                          tcttTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTg                                                           <  2:158262/140‑1 (MQ=255)

                                                                           cttTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGc                                                          >  1:1557100/1‑140 (MQ=255)

                                                                           cttTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGc                                                          >  2:391005/1‑140 (MQ=255)

                                                                           cttTGTAGTGGCGTTCTCTTTCAATATTTTACCACTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGc                                                          <  2:1242515/140‑1 (MQ=255)

                                                                            tttGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCa                                                         <  1:450024/140‑1 (MQ=255)

                                                                                   tGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGtattta                                                  <  2:757458/140‑1 (MQ=255)

                                                                                     gCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGACACTTGTTTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGtatttatt                                                >  2:1536686/1‑140 (MQ=255)

                                                                                     gCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATctgctg                                                              >  2:858373/1‑126 (MQ=255)

                                                                                     gCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATctgctg                                                              <  1:160765/126‑1 (MQ=255)

                                                                                     gCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATctgctg                                                              >  2:160765/1‑126 (MQ=255)

                                                                                     gCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATctgctg                                                              <  1:858373/126‑1 (MQ=255)

                                                                                     gCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGtatttatt                                                >  2:271747/1‑140 (MQ=255)

                                                                                     gCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGtatttatt                                                >  2:862641/1‑140 (MQ=255)

                                                                                     gCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGtatttatt                                                >  2:1533976/1‑140 (MQ=255)

                                                                                        ttCTCTTTCAATATTTTACCGCTTCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCa                                             <  2:740983/140‑1 (MQ=255)

                                                                                        ttCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCa                                                         >  1:645890/1‑128 (MQ=255)

                                                                                        ttCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCa                                                         <  2:645890/128‑1 (MQ=255)

                                                                                        ttCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCa                                             >  1:128711/1‑140 (MQ=255)

                                                                                        ttCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCa                                             >  1:1594585/1‑140 (MQ=255)

                                                                                        ttCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCa                                             >  1:1488698/1‑140 (MQ=255)

                                                                                          ctctTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATc                                           <  1:127830/140‑1 (MQ=255)

                                                                                          ctctTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATc                                           <  2:128711/140‑1 (MQ=255)

                                                                                          ctctTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATc                                           >  1:630655/1‑140 (MQ=255)

                                                                                          ctctTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATc                                           <  1:390570/140‑1 (MQ=255)

                                                                                          ctctTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATc                                           >  2:281900/1‑140 (MQ=255)

                                                                                               tCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGttt                                      <  2:1488698/140‑1 (MQ=255)

                                                                                               tCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGttt                                      <  1:184212/140‑1 (MQ=255)

                                                                                                    atTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTtata                                 <  1:54641/140‑1 (MQ=255)

                                                                                                    atTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTtata                                 <  1:31650/140‑1 (MQ=255)

                                                                                                    atTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTtata                                 <  1:281900/140‑1 (MQ=255)

                                                                                                    atTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTtata                                 <  1:271747/140‑1 (MQ=255)

                                                                                                    atTTTACCGCTGCCTTCACAAAAGATAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTtata                                 <  2:1081677/140‑1 (MQ=255)

                                                                                                       ttACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTTATACAg                              >  2:610525/1‑140 (MQ=255)

                                                                                                       ttACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACAT‑AAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGc                                              >  2:1485964/1‑123 (MQ=255)

                                                                                                       ttACCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACAT‑AAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGc                                              <  1:1485964/123‑1 (MQ=255)

                                                                                                         aCCGCTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTTATACAGCa                            <  2:466739/140‑1 (MQ=255)

                                                                                                             cTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTtata                                 <  1:119063/131‑1 (MQ=255)

                                                                                                             cTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTtata                                 >  2:119063/1‑131 (MQ=255)

                                                                                                             cTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTTATACAGCa                            <  1:1487338/136‑1 (MQ=255)

                                                                                                             cTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTTATACAGCATAGa                        >  1:1412572/1‑140 (MQ=255)

                                                                                                             cTGCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGGTTTTATACAGCa                            >  2:1487338/1‑136 (MQ=255)

                                                                                                               gCCTTCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTTATACAGCATAGAAt                      >  2:1030566/1‑140 (MQ=255)

                                                                                                                   tCACAAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTTATACAGCATAGAATTaaa                  >  2:658441/1‑140 (MQ=255)

                                                                                                                    cacaAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTTATACAGCATAGAATTAAAg                 <  2:410048/140‑1 (MQ=255)

                                                                                                                     acaAAAGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTTATACAGCATAGAATTAAAGc                <  1:756706/140‑1 (MQ=255)

                                                                                                                        aaaGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTTATACAGCATAGAATTAAAGCTTa             <  1:1011662/140‑1 (MQ=255)

                                                                                                                         aaGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTTATACAGCATAGAATTAAAGCTTAt            >  2:56395/1‑140 (MQ=255)

                                                                                                                          aGGTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTTATACAGCATAGAATTAAAGCTTAtt           >  1:54298/1‑140 (MQ=255)

                                                                                                                            gTAATTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTTATACAGCATAGAATTAAAGCTTATTTa         >  2:1344417/1‑140 (MQ=255)

                                                                                                                              aaTTGTTATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTTATACAGCATAGAATTAAAGCTTATTTAAc       >  1:365654/1‑140 (MQ=255)

                                                                                                                                   ttATGGATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTTATACAGCATAGAATTAAAGCTTATTTAACattat  >  2:1234107/1‑140 (MQ=255)

GTAAGAAAGATATTTAGCAAAAAAATTGACTTTACGATCTTGGCATTTTTCTATATTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGAATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTTATACAGCATAGAATTAAAGCTTATTTAACATTAT  >  NC_000913/2773345‑2773615

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`