Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,374,051	Δ1 bp	coding (830/882 nt)	ycjO →	putative ABC transporter membrane subunit YcjO

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,374,048	0	T	.	100.0%	356.2 / NA	83	coding (827/882 nt)	ycjO	putative ABC transporter membrane subunit YcjO
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base . (48/35);  total (48/35)

TGTTCTACATGTTCGCGGATGTTTATTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTATTTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCTCATCATCACGCTGTTTCCATTTTTTGTGATG  >  NC_000913/1373913‑1374182                                                                                                                                        |                                                                                                                                       tGTTCTACATGTTCGCGGATGTTTATTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTAtttcg                                                                                                                                    <  1:332268/140‑3 (MQ=255)  gTTCTACATGTTCGCGGATGTTTATTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTAtttcgc                                                                                                                                   <  1:757624/140‑4 (MQ=255)   ttCTACATGTTCGCGGATGTTTATTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTAtttcgct                                                                                                                                  >  1:1021900/1‑136 (MQ=255)   ttCTACATGTTCGCGGATGTTTATTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTAtttcgct                                                                                                                                  >  1:121760/1‑136 (MQ=255)    tCTACATGTTCGCGGATGTTTATTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTg                                                                                                                                >  1:791902/1‑140 (MQ=255)     cTACATGTTCGCGGATGTTTATTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGt                                                                                                                               >  2:108470/1‑140 (MQ=255)     cTACATGTTCGCGGATGTTTATTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGt                                                                                                                               >  2:1012188/1‑140 (MQ=255)             tCGCGGATGTTTATTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTAttt                                                                                                                                      >  1:652915/1‑126 (MQ=255)             tCGCGGATGTTTATTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTAttt                                                                                                                                      <  2:652915/126‑1 (MQ=255)             tCGCGGATGTTTATTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTctgc                                                                                                                       >  2:42426/1‑140 (MQ=255)             tCGCGGATGTTTATTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTctgc                                                                                                                       >  2:1153279/1‑140 (MQ=255)              cgcgGATGTTTATTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCa                                                                                                                             <  1:741777/133‑1 (MQ=255)              cgcgGATGTTTATTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCa                                                                                                                             >  2:741777/1‑133 (MQ=255)              cgcgGATGTTTATTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTctgct                                                                                                                      >  2:319701/1‑140 (MQ=255)              cgcgGATGTTTATTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTctgct                                                                                                                      >  2:742165/1‑140 (MQ=255)              cgcgGATGTTTATTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTctgct                                                                                                                      >  1:1383447/1‑140 (MQ=255)              cgcgGATGTTTATTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTctgct                                                                                                                      >  2:1013052/1‑140 (MQ=255)              cgcgGATGTTTATTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTctgct                                                                                                                      >  1:1197946/1‑140 (MQ=255)              cgcgGATGTTTATTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTctgct                                                                                                                      >  1:686449/1‑140 (MQ=255)              cgcgGATGTTTATTTGCTGACGACCAAGGCCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGAACTCGGAGGTGCTCTTCATCATTA‑TTTCCCTATCATTctgct                                                                                                                      >  2:650309/1‑140 (MQ=255)                cgGATGTTTATTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTAtttcgc                                                                                                                                   <  2:204897/126‑4 (MQ=255)                cgGATGTTTATTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTAtttcgc                                                                                                                                   >  1:204897/1‑123 (MQ=255)                       ttATTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGaa                                                                                                             <  1:206742/140‑1 (MQ=255)                       ttATTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGaa                                                                                                             <  1:764900/140‑1 (MQ=255)                         aTTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAAc                                                                                                           <  1:319701/140‑1 (MQ=255)                              cTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTg                                                                                                      <  1:1012188/140‑1 (MQ=255)                              cTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTg                                                                                                      <  1:742165/140‑1 (MQ=255)                              cTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTg                                                                                                      <  2:464330/140‑1 (MQ=255)                                gacgacCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAGACGGGTGaa                                                                                                    >  2:624885/1‑140 (MQ=255)                                  cgacCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAAcc                                                                                                  >  2:1408386/1‑140 (MQ=255)                                      cAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCaa                                                                                              >  2:785999/1‑140 (MQ=255)                                        aGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATg                                                                                            >  1:83381/1‑140 (MQ=255)                                         ggTCGATATTCTCGGTGTATATCTCTGCAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATgg                                                                                           <  1:785999/140‑1 (MQ=255)                                           tCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGca                                                                                         <  2:1021900/140‑1 (MQ=255)                                                  tctcGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAGACGGGTGAACCTCAATGGCAACAAATa                                                                                  <  1:624885/140‑1 (MQ=255)                                                  tctcGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATa                                                                                  <  2:1383447/140‑1 (MQ=255)                                                  tctcGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATa                                                                                  <  1:1388744/140‑1 (MQ=255)                                                     cGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAAc                                                                               <  1:227726/140‑1 (MQ=255)                                                      ggTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACg                                                                              <  1:551150/140‑1 (MQ=255)                                                      ggTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACg                                                                              <  2:121760/140‑1 (MQ=255)                                                         gtATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGcac                                                                           >  1:710630/1‑140 (MQ=255)                                                                tctACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGt                                                                    >  1:272645/1‑140 (MQ=255)                                                                  tACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCg                                                                  >  1:1315905/1‑140 (MQ=255)                                                                  tACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCg                                                                  >  1:902094/1‑140 (MQ=255)                                                                  tACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCg                                                                  >  1:1386430/1‑140 (MQ=255)                                                                    cAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCa                                                                >  1:388373/1‑140 (MQ=255)                                                                    cAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCa                                                                >  2:630214/1‑140 (MQ=255)                                                                    cAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCa                                                                >  2:1383575/1‑140 (MQ=255)                                                                     aaaaCCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCAt                                                               <  2:1315905/140‑1 (MQ=255)                                                                          cGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCa                                                                >  1:1386904/1‑134 (MQ=255)                                                                          cGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCa                                                                <  2:1386904/134‑1 (MQ=255)                                                                          cGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGtt                                                          >  1:321041/1‑140 (MQ=255)                                                                          cGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGtt                                                          >  1:1328017/1‑140 (MQ=255)                                                                          cGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGtt                                                          >  1:506770/1‑140 (MQ=255)                                                                          cGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGtt                                                          >  1:102160/1‑140 (MQ=255)                                                                                 gcctttAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTg                                                   >  2:1268916/1‑140 (MQ=255)                                                                                   ctttAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCg                                                 <  2:791902/140‑1 (MQ=255)                                                                                            tttAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGtttt                                                        <  2:1380721/124‑1 (MQ=255)                                                                                            tttAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGtttt                                                        >  1:1380721/1‑124 (MQ=255)                                                                                            tttAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGgcgc                                        >  1:686087/1‑140 (MQ=255)                                                                                            tttAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGgcgc                                        <  1:1383575/140‑1 (MQ=255)                                                                                               aGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGt                                     >  1:1389923/1‑140 (MQ=255)                                                                                                   aaaGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTtct                                 <  2:83381/140‑1 (MQ=255)                                                                                                     aGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGgcgc                                        >  2:369389/1‑131 (MQ=255)                                                                                                     aGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGgcgc                                        <  1:369389/131‑1 (MQ=255)                                                                                                     aGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCtca                               >  2:155966/1‑140 (MQ=255)                                                                                                     aGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCtca                               <  2:874641/140‑1 (MQ=255)                                                                                                     aGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCtca                               >  1:1139937/1‑140 (MQ=255)                                                                                                     aGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCtca                               >  1:615743/1‑140 (MQ=255)                                                                                                     aGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCtca                               >  1:874641/1‑140 (MQ=255)                                                                                                         gcggcgATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCtcatcat                           <  1:1408386/140‑1 (MQ=255)                                                                                                         gcggcgATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCtcatcat                           >  1:728724/1‑140 (MQ=255)                                                                                                          cggcgATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGgcg                                         <  1:228172/125‑1 (MQ=255)                                                                                                          cggcgATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGgcg                                         >  2:228172/1‑125 (MQ=255)                                                                                                             cgATCTCGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCTCATCATCACg                       <  1:1402391/140‑1 (MQ=255)                                                                                                                  tcGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCTCATCATCACGCTGtt                  <  2:1323475/140‑1 (MQ=255)                                                                                                                  tcGGTGGTGCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCTCATCATCACGCTGtt                  >  1:1056836/1‑140 (MQ=255)                                                                                                                      tggtgCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCTCATCATCACGCTGTTTCCa              >  1:985052/1‑140 (MQ=255)                                                                                                                        gtgCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCTCATCATCACGCTGTTTCCAtt            <  2:272645/140‑1 (MQ=255)                                                                                                                         tgCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCTCATCATCACGCTGTTTCCAttt           >  2:297510/1‑140 (MQ=255)                                                                                                                         tgCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCTCATCATCACGCTGTTTCCAttt           >  1:75124/1‑140 (MQ=255)                                                                                                                          gCTCTTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCTCATCATCACGCTGTTTCCAtttt          <  2:686087/140‑1 (MQ=255)                                                                                                                           ctctTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCTCATCATCACGCTGTTTCCAttttt         >  1:812903/1‑140 (MQ=255)                                                                                                                           ctctTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCTCATCATCACGCTGTTTCCAttttt         >  2:1157588/1‑140 (MQ=255)                                                                                                                            tctTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCTCATCATCACGCTGTTTCCAtttttt        >  1:1391836/1‑140 (MQ=255)                                                                                                                             ctTCATCATTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCTCATCATCACGCTGTTTCCATTTTTtg       <  2:1389923/140‑1 (MQ=255)                                                                                                                               tcatcaTTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCTCATCATCACGCTGTTTCCATTTTTtgtg     <  1:1013052/140‑1 (MQ=255)                                                                                                                               tcatcaTTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCTCATCATCACGCTGTTTCCATTTTTtgtg     <  1:965092/140‑1 (MQ=255)                                                                                                                               tcatcaTTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCTCATCATCACGCTGTTTCCATTTTTtgtg     <  2:1197946/140‑1 (MQ=255)                                                                                                                               tcatcaTTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAACGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCTCATCATCACGCTGTTTCCATTTTTtgtg     <  2:686449/140‑1 (MQ=255)                                                                                                                                catcatTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCTCATCATCACGCTGTTTCCATTTTTTGTGa    <  1:1157588/140‑1 (MQ=255)                                                                                                                                  tcatTA‑TTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCTCATCATCACGCTGTTTCCATTTTTTGTGATg  >  1:265889/1‑140 (MQ=255)                                                                                                                                        |                                                                                                                                       TGTTCTACATGTTCGCGGATGTTTATTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTATTTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCTCATCATCACGCTGTTTCCATTTTTTGTGATG  >  NC_000913/1373913‑1374182

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑