Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,452,765	(T)5→4	coding (878/2046 nt)	paaZ ←	oxepin‑CoA hydrolase/3‑oxo‑5,6‑dehydrosuberyl‑CoA semialdehyde dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,452,761	0	T	.	100.0%	303.9 / NA	71	coding (882/2046 nt)	paaZ	oxepin‑CoA hydrolase/3‑oxo‑5,6‑dehydrosuberyl‑CoA semialdehyde dehydrogenase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base . (36/35);  total (36/35)

TTACCAGTGCGCCCATTTTCACGCCTTCCTGAGCAGGATCACCGACCACGACTTTCTGTAATCGCGCAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACATTTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACGCAGCAGTTCAGGGAATCAGCTTCCATAGTGAAGGGGA  >  NC_000913/1452628‑1452891                                                                                                                                      |                                                                                                                                   ttACCAGTGCGCCCATTTTCACGCCTTCCTGAGCAGGATCACCGACCACGACTTTCTGTAATCGCGCAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACAttttgcc                                                                                                                              >  2:1330063/1‑137 (MQ=255)   aCCAGTGCGCCCATTTTCACGCCTTCCTGAGCAGGATCACCGACCACGACTTTCTGTAATCGCGCAACCAGAGCATCACTGACAGCATTAACCAATGCCTACGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCg                                                                                                                           >  1:759594/1‑140 (MQ=255)   aCCAGTGCGCCCAATTTGACGCCTTTCGGAGCAGGATCACCGACCACGACTTTCTGTAATCGCGCAACCAGAGCATCACTGACAGCATTAA‑CAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCgg                                                                                                                          >  2:630199/1‑140 (MQ=255)            cccATTTTCACGCCTTCCTGAGCAGGATCACCGACCACGACTTTCTGTAATCGCGCAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTtgtg                                                                                                                  <  1:660282/140‑1 (MQ=255)             ccATTTTCACGCCTTCCTGAGCAGGATCACCGACCACGACTTTCTGTAATCGCGCAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTgg                                                                                                                 <  1:638442/140‑1 (MQ=255)                  ttCACGCCTTCCTGAGCAGGATCACCGACCACGACTTTCTGTAATCGCGCAACCAGAGCATCACTGACAGCATTAACCAATGCCTACGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCAtc                                                                                                            <  2:759594/140‑1 (MQ=255)                          ttCCTGAGCAGGATCACCGACCACGACTTTCTGTAATCGCGCAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGcac                                                                                                    <  1:393430/140‑1 (MQ=255)                           tCCTGAGCAGGATCACCGACCACGACTTTCTGTAATCGCGCAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGcaca                                                                                                   >  2:353263/1‑140 (MQ=255)                               gAGCAGGATCACCGACCACGACTTTCTGTAATCGCGCAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACtt                                                                                               <  1:712777/140‑1 (MQ=255)                               gAGCAGGATCACCGACCACGACTTTCTGTAATCGCGCAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACtt                                                                                               <  2:931301/140‑1 (MQ=255)                               gAGCAGGATCACCGACCACGACTTTCTGTAATCGCGCAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACtt                                                                                               <  1:1330063/140‑1 (MQ=255)                                     gATCACCGACCACGACTTTCTGTAATCGCGCAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACtt                                                                                               >  2:817100/1‑134 (MQ=255)                                     gATCACCGACCACGACTTTCTGTAATCGCGCAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACtt                                                                                               <  1:817100/134‑1 (MQ=255)                                     gATCACCGACCACGACTTTCTGTAATCGCGCAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACtt                                                                                               >  2:138891/1‑134 (MQ=255)                                     gATCACCGACCACGACTTTCTGTAATCGCGCAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACtt                                                                                               <  1:164622/134‑1 (MQ=255)                                     gATCACCGACCACGACTTTCTGTAATCGCGCAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACtt                                                                                               >  2:164622/1‑134 (MQ=255)                                     gATCACCGACCACGACTTTCTGTAATCGCGCAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACtt                                                                                               <  1:138891/134‑1 (MQ=255)                                     gATCACCGACCACGACTTTCTGTAATCGCGCAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGaa                                                                                         >  2:52107/1‑140 (MQ=255)                                     gATCACCGACCACGACTTTCTGTAATCGCGCAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGaa                                                                                         >  2:272260/1‑140 (MQ=255)                                     gATCACCGACCACGACTTTCTGTAATCGCGCAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGaa                                                                                         >  1:703986/1‑140 (MQ=255)                                            gACCACGACTTTCTGTAATCGCGCAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAg                                                                                  >  1:376952/1‑140 (MQ=255)                                               cACGACTTTCTGTAATCGCGCAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAgcgc                                                                               <  2:1129302/140‑1 (MQ=255)                                                   aCTTTCTGTAATCGCGCAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAAc                                                                           <  1:353263/140‑1 (MQ=255)                                                         tGTAATCGCGCAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGt                                                                     <  1:443825/140‑1 (MQ=255)                                                              tCGCGCAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACCCCGGTTGATc                                                                >  1:1218439/1‑140 (MQ=255)                                                               cgcgCAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATcc                                                               <  1:296286/140‑1 (MQ=255)                                                                 cgcAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCgg                                                             >  2:279702/1‑140 (MQ=255)                                                                 cgcAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCgg                                                             >  1:774032/1‑140 (MQ=255)                                                                 cgcAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCgg                                                             >  1:587849/1‑140 (MQ=255)                                                                   cAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACt                                                                          >  1:500010/1‑125 (MQ=255)                                                                   cAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACt                                                                          <  2:500010/125‑1 (MQ=255)                                                                   cAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCgggg                                                           >  1:1300574/1‑140 (MQ=255)                                                                     aCCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTg                                                         >  2:491115/1‑140 (MQ=255)                                                                          agCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATc                                                    >  2:709151/1‑140 (MQ=255)                                                                           gCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCt                                                   <  2:54972/140‑1 (MQ=255)                                                                            cATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCtt                                                  >  2:1282215/1‑140 (MQ=255)                                                                                aCTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGcc                                              <  1:1318129/140‑1 (MQ=255)                                                                                aCTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGcc                                              <  1:358557/140‑1 (MQ=255)                                                                                aCTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGcc                                              >  1:1348513/1‑140 (MQ=255)                                                                                aCTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGcc                                              <  2:1279567/140‑1 (MQ=255)                                                                                    aCAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGt                                          >  1:940127/1‑140 (MQ=255)                                                                                    aCAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGt                                          >  2:385669/1‑140 (MQ=255)                                                                                       gCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACg                                       >  1:823071/1‑140 (MQ=255)                                                                                        cATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACgc                                      >  2:1310960/1‑140 (MQ=255)                                                                                        cATTAACCAATGCCTGCGGCACAATAATCCGCCGGAGTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACgc                                      >  2:1402781/1‑140 (MQ=255)                                                                                         aTTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACgca                                     >  1:1091562/1‑140 (MQ=255)                                                                                         aTTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACgca                                     <  1:35921/140‑1 (MQ=255)                                                                                         aTTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACgca                                     >  1:1337960/1‑140 (MQ=255)                                                                                          ttAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACgcag                                    <  1:31105/140‑1 (MQ=255)                                                                                           tAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACgcagc                                   <  2:376952/140‑1 (MQ=255)                                                                                                aaTGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACGCAGCAGTTc                              >  2:1189277/1‑140 (MQ=255)                                                                                                  tGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACGCAGCAGTTCAg                            >  2:414723/1‑140 (MQ=255)                                                                                                  tGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACGCAGCAGTTCAg                            >  1:33740/1‑140 (MQ=255)                                                                                                  tGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACGCAGCAGTTCAg                            >  1:308225/1‑140 (MQ=255)                                                                                                  tGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACGCAGCAGTTCAg                            >  1:591117/1‑140 (MQ=255)                                                                                                  tGCCTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACGCAGCAGTTCAg                            >  2:78447/1‑140 (MQ=255)                                                                                                    ccTGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACGCAGCAGTTCAggg                          <  2:451911/140‑1 (MQ=255)                                                                                                      tGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACGCAGCAGTTCAGGGaa                        <  1:1348458/140‑1 (MQ=255)                                                                                                      tGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACGCAGCAGTTCAGGGaa                        <  1:385669/140‑1 (MQ=255)                                                                                                      tGCGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACGCAGCAGTTCAGGGaa                        <  1:55767/140‑1 (MQ=255)                                                                                                        cGGCACAATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCTCGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACGCAGCAGTTCAGGGAATc                      >  2:699942/1‑140 (MQ=255)                                                                                                           cacaATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGTCCAGTACGCAGCAGTTCAGGGAATCAGc                   <  1:279702/140‑1 (MQ=255)                                                                                                           cacaATAATCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACGCAGCAGTTCAGGGAATCAGc                   <  2:468117/140‑1 (MQ=255)                                                                                                              aataatCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACGCAGCAGTTCAGGGAATCAGCTTc                >  2:301756/1‑140 (MQ=255)                                                                                                               ataatCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACGCAGCAGTTCAGGGAATCAGCTTcc               <  1:473171/140‑1 (MQ=255)                                                                                                                taatCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACGCAGCAGTTCAGGGAATCAGCTTCCa              <  2:158534/140‑1 (MQ=255)                                                                                                                taatCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACGCAGCAGTTCAGGGAATCAGCTTCCa              <  2:703986/140‑1 (MQ=255)                                                                                                                  atCCGCCGGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACGCAGCAGTTCAGGGAATCAGCTTCCATa            <  1:159345/140‑1 (MQ=255)                                                                                                                       ccgGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACGCAGCAGTTCAGGGAATCAGCTTCCATAGTGaa       >  2:935206/1‑140 (MQ=255)                                                                                                                       ccgGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCGTCGCCCAGTACGCAGCAGTTCAGGGAATCAGCTTCCATAGTGaa       <  2:823071/140‑1 (MQ=255)                                                                                                                        cgGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACGCAGCAGTTCAGGGAATCAGCTTCCATAGTGAAg      <  2:1337960/140‑1 (MQ=255)                                                                                                                        cgGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACGCAGCAGTTCAGGGAATCAGCTTCCATAGTGAAg      <  2:1091562/140‑1 (MQ=255)                                                                                                                        cgGATTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACGCAGCAGTTCAGGGAATCAGCTTCCATAGTGAAg      >  1:862596/1‑140 (MQ=255)                                                                                                                           aTTGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACGCAGCAGTTCAGGGAATCAGCTTCCATAGTGAAgggg   <  1:1017524/140‑1 (MQ=255)                                                                                                                            ttGCCGTACA‑TTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACGCAGCAGTTCAGGGAATCAGCTTCCATAGTGAAGGGGa  <  2:862596/140‑1 (MQ=255)                                                                                                                                      |                                                                                                                                   TTACCAGTGCGCCCATTTTCACGCCTTCCTGAGCAGGATCACCGACCACGACTTTCTGTAATCGCGCAACCAGAGCATCACTGACAGCATTAACCAATGCCTGCGGCACAATAATCCGCCGGATTGCCGTACATTTTTGCCCGGCTTTTGTGGTCATCTCACGCACAACTTCACGAATAAACAGCGCAAACTCCGGTTGATCCGGGGTGACATCTTCGCCCAGTACGCAGCAGTTCAGGGAATCAGCTTCCATAGTGAAGGGGA  >  NC_000913/1452628‑1452891

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑