Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,594,197	G→A	P4S (CCA→TCA)	livG ←	branched chain amino acid/phenylalanine ABC transporter ATP binding subunit LivG

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,594,197	0	G	A	100.0%	284.9 / NA	81	P4S (CCA→TCA)	livG	branched chain amino acid/phenylalanine ABC transporter ATP binding subunit LivG
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (37/44);  total (37/44)

TAAAAACCGTGGTTTTTCCGGCACCGTTAGGGCCGATTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAACATGCTGTATTCGT  >  NC_000913/3594062‑3594333                                                                                                                                        |                                                                                                                                         tAAAAACCGTGGTTTTTCCGGCACCGTTAGGGCCGATTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGa                                                                                                                                      >  1:573598/1‑140 (MQ=255) tAAAAACCGTGGTTTTTCCGGCACCGTTAGGGCCGATTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGa                                                                                                                                      <  2:1178764/140‑1 (MQ=255) tAAAAACCGTGGTTTTTCCGGCACCGTTAGGGCCGATTAACGAGACGATCTCCTGCAGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGa                                                                                                                                      <  1:973940/140‑1 (MQ=255)      aCCGTGGTTTTTCCGGCACCGTTAGGGCCGATTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCAt                                                                                                                                 <  1:278105/140‑1 (MQ=255)       ccGTGGTTTTTCCGGCACCGTTAGGGCCGATTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATg                                                                                                                                >  2:1190408/1‑140 (MQ=255)          tGGTTTTTCCGGCACCGTTAGGGCCGATTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCAt                                                                                                                                 <  2:593288/136‑1 (MQ=255)          tGGTTTTTCCGGCACCGTTAGGGCCGATTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCAt                                                                                                                                 >  1:593288/1‑136 (MQ=255)          tGGTTTTTCCGGCACCGTTAGGGCCGATTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCt                                                                                                                             >  1:1219184/1‑140 (MQ=255)          tGGTTTTTCCGGCACCGTTAGGGCCGATTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCt                                                                                                                             >  1:176583/1‑140 (MQ=255)          tGGTTTTTCCGGCACCGTTAGGGCCGATTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCt                                                                                                                             >  1:199574/1‑140 (MQ=255)            gTTTTTCCGGCGCCTTTGGGGCCGATTACCGAGACGATCTCTTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGc                                                                                                                           <  2:445127/140‑1 (MQ=255)            gTTTTTCCGGCACCGTTAGGGCCGATTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGGTAATAATGACTGACTCATGCCTGc                                                                                                                           <  2:202249/140‑1 (MQ=255)                           ttAGGGCCGATTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGcc                                                                                                                              <  1:995143/122‑1 (MQ=255)                           ttAGGGCCGATTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGcc                                                                                                                              >  2:995143/1‑122 (MQ=255)                                   gATTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGttttt                                                                                                    >  2:882338/1‑140 (MQ=255)                                   gATTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGttttt                                                                                                    >  1:200750/1‑140 (MQ=255)                                   gATTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGttttt                                                                                                    >  1:905264/1‑140 (MQ=255)                                    aTTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTc                                                                                                   >  2:584916/1‑140 (MQ=255)                                    aTTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTc                                                                                                   >  2:660599/1‑140 (MQ=255)                                    aTTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTc                                                                                                   <  2:905264/140‑1 (MQ=255)                                     ttAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCa                                                                                                  >  2:1127278/1‑140 (MQ=255)                                     ttAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCa                                                                                                  >  1:350660/1‑140 (MQ=255)                                               gATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTg                                                                                        >  2:734126/1‑140 (MQ=255)                                                  ctcCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCgg                                                                                     >  1:1145642/1‑140 (MQ=255)                                                    ccTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGgc                                                                                   <  1:1195816/140‑1 (MQ=255)                                                    ccTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGgc                                                                                   <  2:356899/140‑1 (MQ=255)                                                    ccTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGgc                                                                                   <  2:200750/140‑1 (MQ=255)                                                      tGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGgcgc                                                                                 >  2:1152648/1‑140 (MQ=255)                                                       gCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGcgcg                                                                                >  2:765769/1‑140 (MQ=255)                                                         gggTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTc                                                                              <  2:1219184/140‑1 (MQ=255)                                                                 ttCAAGATTGACGTTGTTCACCGCCAGCAGGTCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGgcag                                                                      >  2:507626/1‑140 (MQ=255)                                                                 ttCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGgc                                                                                   >  2:891905/1‑127 (MQ=255)                                                                 ttCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGgc                                                                                   <  1:891905/127‑1 (MQ=255)                                                                 ttCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGgcag                                                                      <  1:1082946/140‑1 (MQ=255)                                                                 ttCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGgcag                                                                      >  1:423276/1‑140 (MQ=255)                                                                    aaGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCaa                                                                   >  1:95304/1‑140 (MQ=255)                                                                     aGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAg                                                                  >  2:312115/1‑140 (MQ=255)                                                                     aGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAg                                                                  >  1:794405/1‑140 (MQ=255)                                                                       aTTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGcc                                                                <  1:1190408/140‑1 (MQ=255)                                                                           aCGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACATATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGc                                                            >  1:961100/1‑140 (MQ=255)                                                                           aCGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGc                                                            >  1:686807/1‑140 (MQ=255)                                                                           aCGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGc                                                            >  1:922440/1‑140 (MQ=255)                                                                           aCGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGc                                                            >  2:343597/1‑140 (MQ=255)                                                                                  tCACCGCCAGCAGGCCGTCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGcc                                                     <  2:811484/140‑1 (MQ=255)                                                                                  tCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGcc                                                     <  1:312115/140‑1 (MQ=255)                                                                                  tCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGcc                                                     <  2:794405/140‑1 (MQ=255)                                                                                   cACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCa                                                    >  1:1408732/1‑140 (MQ=255)                                                                                    aCCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAg                                                   <  2:573598/140‑1 (MQ=255)                                                                                       gCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGatc                                                <  2:550717/140‑1 (MQ=255)                                                                                       gCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGatc                                                <  2:285156/140‑1 (MQ=255)                                                                                       gCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGatc                                                <  1:1372438/140‑1 (MQ=255)                                                                                        ccAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGatca                                               <  1:660599/140‑1 (MQ=255)                                                                                           gcagGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTGTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGatcatca                                            >  2:1282009/1‑140 (MQ=255)                                                                                               gccgccGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAg                                        <  1:584916/140‑1 (MQ=255)                                                                                               gccgccGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAg                                        >  1:300178/1‑140 (MQ=255)                                                                                               gccgccGAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAg                                        <  2:1213726/140‑1 (MQ=255)                                                                                                ccgccgAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGc                                       <  2:199574/140‑1 (MQ=255)                                                                                                ccgccgAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGc                                       <  1:1152648/140‑1 (MQ=255)                                                                                                ccgccgAAGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGc                                       <  2:350660/140‑1 (MQ=255)                                                                                                       aGCGCATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCa                                <  2:99001/140‑1 (MQ=255)                                                                                                         cgcATCATCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCaaa                              >  1:624466/1‑140 (MQ=255)                                                                                                           catcatCAGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAacc                            >  1:11959/1‑140 (MQ=255)                                                                                                             tcatcaGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAaccac                          <  1:1127278/140‑1 (MQ=255)                                                                                                              catcaGGCCGTTAACATATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAaccacc                         <  2:961100/140‑1 (MQ=255)                                                                                                              catcaGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAaccacc                         <  2:423276/140‑1 (MQ=255)                                                                                                              catcaGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAaccacc                         <  2:1377282/140‑1 (MQ=255)                                                                                                                tcaGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGa                       <  2:686807/140‑1 (MQ=255)                                                                                                                tcaGGCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGa                       >  1:332801/1‑140 (MQ=255)                                                                                                                   ggCCGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCa                    <  1:1066831/140‑1 (MQ=255)                                                                                                                     ccGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCAtt                  <  1:765769/140‑1 (MQ=255)                                                                                                                      cGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTa                 >  2:1067393/1‑140 (MQ=255)                                                                                                                      cGTTAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTa                 <  2:922440/140‑1 (MQ=255)                                                                                                                        ttAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAAc               <  2:242111/140‑1 (MQ=255)                                                                                                                        ttAACAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAACAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAAc               <  2:176583/140‑1 (MQ=255)                                                                                                                          aaCAGATAATAATGACTGCCTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAACAt             <  2:1145642/140‑1 (MQ=255)                                                                                                                          aaCAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAACAt             <  1:128228/140‑1 (MQ=255)                                                                                                                           aCAGATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAACATg            <  2:624466/140‑1 (MQ=255)                                                                                                                              gATAATAATGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAACATGCTg         >  2:896134/1‑140 (MQ=255)                                                                                                                                taataaTGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAACATGCTGTa       <  1:507626/140‑1 (MQ=255)                                                                                                                                   taatGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAACATGCTGTATTc    >  1:199211/1‑140 (MQ=255)                                                                                                                                     atGACTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAACATGCTGTATTCGt  <  1:1282009/140‑1 (MQ=255)                                                                                                                                        |                                                                                                                                         TAAAAACCGTGGTTTTTCCGGCACCGTTAGGGCCGATTAACGAGACGATCTCCTGCGGGTACAGTTCAAGATTGACGTTGTTCACCGCCAGCAGGCCGCCGAAGCGCATCATCAGGCCGTTAACAGATAATAATGGCTGACTCATGCCTGCTCTCCTTTCGCTGCGCCGTTTTTCAGCTTCAGTTGCGGGCGCGTCATGGGCAGCAAGCCCTGCGGACGCCAGATCATCATCAGCACCATCAAACCACCGAGCATTAACATGCTGTATTCGT  >  NC_000913/3594062‑3594333

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑