BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,935,296	C→T	T3T (ACC→ACT)	rbsC →	ribose ABC transporter membrane subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,935,296	0	C	T	100.0%	379.6 / NA	107	T3T (ACC→ACT)	rbsC	ribose ABC transporter membrane subunit
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (48/59); total (48/59)

Only 100 of 108 total aligned reads displayed.

GAGCGATCGCATCATCGTCATGCATGAAGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAA  >  NC_000913/3935160‑3935430

gAGCGATCGCATCATCGTCATGCATGAAGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAg                                                                                                                                     <  1:267042/140‑1 (MQ=255)

gAGCGATCGCATCATCGTCATGCATGAAGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAg                                                                                                                                     >  1:681176/1‑140 (MQ=255)

gAGCGATCGCATCATCGTCATGCATGAAGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAg                                                                                                                                     <  1:89685/140‑1 (MQ=255)

gAGCGATCGCATCATCGTCATGCATGAAGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAg                                                                                                                                     >  2:100998/1‑140 (MQ=255)

gAGCGATCGCATCATCGTCATGCATGAAGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAg                                                                                                                                     >  1:122842/1‑140 (MQ=255)

gAGCGATCGCATCATCGTCATGCATGAAGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAg                                                                                                                                     >  2:313321/1‑140 (MQ=255)

 aGCGATCGCATCATCGTCATGCATGAAGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGa                                                                                                                                    <  1:1042054/140‑1 (MQ=255)

 aGCGATCGCATCATCGTCATGCATGAAGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGa                                                                                                                                    >  1:452210/1‑140 (MQ=255)

 aGCGATCGCATCATCGTCATGCATGAAGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGa                                                                                                                                    <  2:1158901/140‑1 (MQ=255)

 aGCGATCGCATCATCGTCATGCATGAAGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGa                                                                                                                                    <  2:373676/140‑1 (MQ=255)

 aGCGATCGCATCATCGTCATGCATGAAGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGa                                                                                                                                    >  2:87494/1‑140 (MQ=255)

       cGCATCATCGTCATGCATGAAGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGtct                                                                                                                              <  1:313321/140‑1 (MQ=255)

                  catgcatgTAGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGt                                                                                                                   <  1:341371/140‑1 (MQ=255)

                  catgcatgAAGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGt                                                                                                                   <  1:1317340/140‑1 (MQ=255)

                  catgcatgAAGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGt                                                                                                                   <  2:634370/140‑1 (MQ=255)

                  catgcatgAAGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGt                                                                                                                   <  1:395362/140‑1 (MQ=255)

                    tgcatgAAGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTa                                                                                                                 >  1:981299/1‑140 (MQ=255)

                    tgcatgAAGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTa                                                                                                                 <  2:62635/140‑1 (MQ=255)

                    tgcatgAAGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTa                                                                                                                 >  1:475109/1‑140 (MQ=255)

                    tgcatgAAGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTa                                                                                                                 >  1:451488/1‑140 (MQ=255)

                     gcatgAAGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTAt                                                                                                                <  2:1129207/140‑1 (MQ=255)

                      catgAAGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCattatt                                                                                                               >  2:995831/1‑140 (MQ=255)

                       atgAAGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTActt                                                                                                              >  2:754394/1‑140 (MQ=255)

                           aGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACg                                                                                                          >  2:1253918/1‑140 (MQ=255)

                           aGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACg                                                                                                          <  1:45469/140‑1 (MQ=255)

                           aGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACg                                                                                                          <  2:1014834/140‑1 (MQ=255)

                               cATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACg                                                                                                          >  2:1170369/1‑136 (MQ=255)

                               cATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACg                                                                                                          <  1:1170369/136‑1 (MQ=255)

                               cATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAg                                                                                                      >  2:226583/1‑140 (MQ=255)

                                aTCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGc                                                                                                     <  2:153976/140‑1 (MQ=255)

                                aTCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGc                                                                                                     >  1:284727/1‑140 (MQ=255)

                                 tctcAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCATACTGTCTCTGGTCGCCGTTAtt                                                                                                               >  2:956018/1‑129 (MQ=255)

                                 tctcAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCATACTGTCTCTGGTCGCCGTTAtt                                                                                                               <  1:956018/129‑1 (MQ=255)

                                 tctcAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCg                                                                                                    >  1:241285/1‑140 (MQ=255)

                                 tctcAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCg                                                                                                    >  2:634262/1‑140 (MQ=255)

                                        ggggAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGa                                                                                             <  2:577483/140‑1 (MQ=255)

                                        ggggAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGa                                                                                             >  2:274186/1‑140 (MQ=255)

                                        ggggAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGa                                                                                             <  2:842197/140‑1 (MQ=255)

                                        ggggAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGa                                                                                             >  1:599453/1‑140 (MQ=255)

                                         gggAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGAt                                                                                            <  1:274186/140‑1 (MQ=255)

                                             aTTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAg                                                                                        <  1:226583/140‑1 (MQ=255)

                                                   tCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGaaa                                                                                  >  1:1330530/1‑140 (MQ=255)

                                                     gTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATc                                                                                <  1:1253918/140‑1 (MQ=255)

                                                     gTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATc                                                                                <  1:634262/140‑1 (MQ=255)

                                                             gCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCt                                                                             <  1:73706/135‑1 (MQ=255)

                                                             gCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCt                                                                             >  2:73706/1‑135 (MQ=255)

                                                             gCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCg                                                                        >  1:1034987/1‑140 (MQ=255)

                                                             gCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCg                                                                        <  2:82776/140‑1 (MQ=255)

                                                             gCCACCC‑GGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGc                                                                       <  2:1061923/140‑1 (MQ=255)

                                                              ccACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGc                                                                       <  1:902400/140‑1 (MQ=255)

                                                                aCCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGctc                                                                     <  2:44277/140‑1 (MQ=255)

                                                                aCCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGctc                                                                     <  2:475109/140‑1 (MQ=255)

                                                                aCCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGctc                                                                     <  2:981299/140‑1 (MQ=255)

                                                                 cccAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGctct                                                                    >  2:173000/1‑140 (MQ=255)

                                                                  ccAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTctg                                                                   >  2:562968/1‑140 (MQ=255)

                                                                       aaGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGt                                                              >  2:368220/1‑140 (MQ=255)

                                                                        aGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTg                                                             <  2:451488/140‑1 (MQ=255)

                                                                           gtTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTg                                                          >  1:652216/1‑140 (MQ=255)

                                                                           gtTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTg                                                          >  1:784348/1‑140 (MQ=255)

                                                                            ttAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGTTGATGGAGCAGAAATCGCTTATAGGTCTGCTGGtgatga                                                         >  2:762469/1‑140 (MQ=255)

                                                                            ttAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGa                                                         >  2:898003/1‑140 (MQ=255)

                                                                             tAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGAt                                                        <  2:399302/140‑1 (MQ=255)

                                                                             tAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGAt                                                        <  1:790565/140‑1 (MQ=255)

                                                                                   cTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATCTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGAt                                                  <  2:1259960/140‑1 (MQ=255)

                                                                                    tGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGAt                                                        >  1:250681/1‑133 (MQ=255)

                                                                                    tGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGAt                                                        <  2:250681/133‑1 (MQ=255)

                                                                                    tGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGAtt                                                 >  1:8243/1‑140 (MQ=255)

                                                                                    tGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGAtt                                                 >  2:1008886/1‑140 (MQ=255)

                                                                                    tGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGAtt                                                 >  2:278220/1‑140 (MQ=255)

                                                                                      ccGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGt                                               >  2:193205/1‑140 (MQ=255)

                                                                                         cTGTGGGTAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGtctc                                            <  1:278220/140‑1 (MQ=255)

                                                                                         cTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGGCAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGtctc                                            <  2:463839/140‑1 (MQ=255)

                                                                                         cTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGtctc                                            <  1:193666/140‑1 (MQ=255)

                                                                                          tgtgGGAAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAAGCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCg                                           <  2:599453/140‑1 (MQ=255)

                                                                                                   gCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGc                                  >  1:998534/1‑140 (MQ=255)

                                                                                                    cTTAATCGCGTGAATCAGGAGTCAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGcc                                 <  1:996371/140‑1 (MQ=255)

                                                                                                    cTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGcc                                 <  1:1405248/140‑1 (MQ=255)

                                                                                                      tAATCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCg                               <  1:1121288/140‑1 (MQ=255)

                                                                                                        aTCGCGTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGaa                             >  1:1044382/1‑140 (MQ=255)

                                                                                                             gTGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACtttt                        >  1:1327946/1‑140 (MQ=255)

                                                                                                              tGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGtt                                      <  1:1155835/125‑1 (MQ=255)

                                                                                                              tGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGtt                                      >  2:1155835/1‑125 (MQ=255)

                                                                                                              tGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACttttt                       >  2:68978/1‑140 (MQ=255)

                                                                                                              tGAATCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACttttt                       >  2:801927/1‑140 (MQ=255)

                                                                                                                aaTCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCa                     <  1:200398/140‑1 (MQ=255)

                                                                                                                aaTCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCa                     <  1:562968/140‑1 (MQ=255)

                                                                                                                 aTCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCAc                    <  1:370494/140‑1 (MQ=255)

                                                                                                                  tCAGGAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCAcc                   <  1:841165/140‑1 (MQ=255)

                                                                                                                      gAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCa               <  1:949600/140‑1 (MQ=255)

                                                                                                                      gAGTAAAAAAATGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCa               <  1:664053/140‑1 (MQ=255)

                                                                                                                           aaaaaaTGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAAc          >  1:804911/1‑140 (MQ=255)

                                                                                                                           aaaaaaTGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAAc          >  1:19627/1‑140 (MQ=255)

                                                                                                                           aaaaaaTGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAAc          <  2:652216/140‑1 (MQ=255)

                                                                                                                           aaaaaaTGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAAc          <  2:452210/140‑1 (MQ=255)

                                                                                                                             aaaaTGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACtt        <  2:241285/140‑1 (MQ=255)

                                                                                                                              aaaTGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTa       <  1:801927/140‑1 (MQ=255)

                                                                                                                                aTGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTAtt     <  2:1284930/140‑1 (MQ=255)

                                                                                                                                 tGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTc    >  2:457520/1‑140 (MQ=255)

                                                                                                                                 tGACAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTc    >  1:1362016/1‑140 (MQ=255)

                                                                                                                                   aCAACTCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCaa  <  1:368220/140‑1 (MQ=255)

GAGCGATCGCATCATCGTCATGCATGAAGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAAAAAAATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAA  >  NC_000913/3935160‑3935430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`